Cow genome map

Conread name: Pig1-57C11

Conread position: 1-219
Cow position: chr27:25805128-25805345 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 88

Conread position: 2-160
Cow position: chr27:15278313-15278475 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 2-160
Cow position: chr27:16432224-16432061 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 2-177
Cow position: chr27:25002775-25002958 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 162

Conread position: 2-237
Cow position: chr27:13897947-13897701 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 155

Conread position: 2-237
Cow position: chr27:23334915-23334670 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 141

Conread position: 2-237
Cow position: chr27:26324566-26324320 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr27:27662646-27662400 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 159

Conread position: 2-249
Cow position: chr27:2364503-2364237 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 158

Conread position: 2-274
Cow position: chr27:892964-892685 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 156

Conread position: 3-237
Cow position: chr27:14460705-14460950 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 158

Conread position: 3-249
Cow position: chr27:15541079-15540825 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 165

Conread position: 3-255
Cow position: chr27:5910617-5910354 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 7

Conread position: 3-256
Cow position: chr27:16439081-16438845 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 73

Conread position: 5-196
Cow position: chr27:27051413-27051219 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 168

Conread position: 8-249
Cow position: chr27:25116992-25116750 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 54

Conread position: 10-249
Cow position: chr27:16034649-16034895 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 149

Conread position: 11-237
Cow position: chr27:1209094-1208863 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 23

Conread position: 11-256
Cow position: chr27:26556232-26556488 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 150

Conread position: 13-289
Cow position: chr27:11471652-11471936 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 34

Conread position: 33-248
Cow position: chr27:25999326-25999552 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 121

Conread position: 38-214
Cow position: chr27:23930428-23930606 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 131

Conread position: 49-240
Cow position: chr27:9993488-9993688 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 76

Conread position: 86-256
Cow position: chr27:5985427-5985603 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 78

Conread position: 178-518
Cow position: chr27:31210221-31210555 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 12

Conread position: 225-438
Cow position: chr27:31183284-31183503 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 62

Conread position: 241-534
Cow position: chr27:17397720-17397428 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 31

Conread position: 248-510
Cow position: chr27:19496617-19496875 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 130

Conread position: 248-518
Cow position: chr27:11480899-11480624 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 23

Conread position: 248-534
Cow position: chr27:16103551-16103831 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 212, 17

Conread position: 250-436
Cow position: chr27:22748067-22748252 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 103

Conread position: 250-487
Cow position: chr27:23957257-23957494 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 202

Conread position: 250-499
Cow position: chr27:26434075-26433816 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 133

Conread position: 251-458
Cow position: chr27:4398744-4398544 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 251-459
Cow position: chr27:10581276-10581477 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 251-500
Cow position: chr27:27632852-27632610 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 193, 70

Conread position: 251-518
Cow position: chr27:22035629-22035368 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 209, 20

Conread position: 251-519
Cow position: chr27:26437380-26437110 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 101

Conread position: 251-525
Cow position: chr27:4944764-4944499 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 208, 20

Conread position: 251-534
Cow position: chr27:26226545-26226267 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 207, 21

Conread position: 252-471
Cow position: chr27:11133829-11134045 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 101

Conread position: 252-531
Cow position: chr27:15409286-15409014 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 85

Conread position: 252-532
Cow position: chr27:26794042-26793767 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 118

Conread position: 253-518
Cow position: chr27:28478324-28478589 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 92

Conread position: 254-518
Cow position: chr27:19508757-19509022 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 11

Conread position: 254-532
Cow position: chr27:299628-299358 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 206, 9

Conread position: 255-441
Cow position: chr27:9253368-9253183 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 98

Conread position: 257-458
Cow position: chr27:24693166-24693360 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 258-436
Cow position: chr27:178611-178788 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 259-458
Cow position: chr27:8630127-8629924 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 64

Conread position: 259-487
Cow position: chr27:6106454-6106678 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 44

Conread position: 259-499
Cow position: chr27:26617164-26617396 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 201, 43

Conread position: 261-435
Cow position: chr27:26087071-26087240 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 261-531
Cow position: chr27:19685960-19685691 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 21, 47

Conread position: 261-534
Cow position: chr27:26853599-26853334 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 199, 10

Conread position: 262-378
Cow position: chr27:26315388-26315274 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 262-517
Cow position: chr27:26112166-26111904 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 262-519
Cow position: chr27:11435575-11435314 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 234

Conread position: 262-534
Cow position: chr27:426722-426991 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 198, 90

Conread position: 262-534
Cow position: chr27:23594071-23594345 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 72, 134

Conread position: 265-534
Cow position: chr27:14670625-14670365 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 194, 76

Conread position: 266-436
Cow position: chr27:28062438-28062273 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 266-468
Cow position: chr27:29614798-29615001 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 194, 86

Conread position: 266-495
Cow position: chr27:29494142-29493911 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 58

Conread position: 266-499
Cow position: chr27:7412150-7412383 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 193, 86

Conread position: 266-527
Cow position: chr27:29164531-29164790 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 194, 55

Conread position: 266-532
Cow position: chr27:7649835-7649563 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 50

Conread position: 266-534
Cow position: chr27:15669018-15668747 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 257

Conread position: 266-534
Cow position: chr27:23560273-23560007 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 87

Conread position: 266-534
Cow position: chr27:26643459-26643709 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 191, 37

Conread position: 267-472
Cow position: chr27:24223712-24223915 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 171, 31

Conread position: 267-480
Cow position: chr27:6319679-6319890 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 68

Conread position: 267-499
Cow position: chr27:15003222-15002988 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 193, 0

Conread position: 267-506
Cow position: chr27:27055053-27055284 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 193, 74

Conread position: 267-509
Cow position: chr27:23994658-23994421 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 131

Conread position: 267-532
Cow position: chr27:591011-590739 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 11

Conread position: 267-532
Cow position: chr27:27389270-27388997 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 96

Conread position: 267-534
Cow position: chr27:26999666-26999398 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 70

Conread position: 268-468
Cow position: chr27:19576565-19576364 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 85

Conread position: 268-531
Cow position: chr27:20897262-20897003 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 189, 85

Conread position: 269-416
Cow position: chr27:22150934-22150789 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 269-530
Cow position: chr27:12459047-12459304 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 85

Conread position: 271-485
Cow position: chr27:7425427-7425212 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 189, 81

Conread position: 275-473
Cow position: chr27:26323207-26323412 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 275-534
Cow position: chr27:26865343-26865095 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 184, 77

Conread position: 279-470
Cow position: chr27:15859528-15859339 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 151

Conread position: 279-531
Cow position: chr27:19660697-19660955 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 280-516
Cow position: chr27:13318207-13317972 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 105

Conread position: 281-458
Cow position: chr27:26504075-26504249 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 0

Conread position: 281-532
Cow position: chr27:23108131-23107880 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 80, 164

Conread position: 281-532
Cow position: chr27:27695004-27694750 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 104

Conread position: 289-531
Cow position: chr27:20068196-20067956 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 70

Conread position: 344-532
Cow position: chr27:4672847-4673040 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 9

Show alignments to all cow chromosomes.