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Cow genome map

           
Conread name:
           
Pig1-57C11
        

               
Conread position:
               
2-191
               

               
Cow position:
               
chr4:17926770-17926962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr4:12241735-12241944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr4:33493296-33493051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
24, 160
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:4905638-4905393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:13492060-13491811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:16359375-16359144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:41118613-41118365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:41330924-41330678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:44724567-44724324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:45049811-45050057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr4:46712857-46713094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr4:48025886-48025636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:101445-101702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 152
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:3125265-3125007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:5879662-5879412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:6269144-6269395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:13547512-13547250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:46663688-46663436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr4:28830522-28830263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:31668800-31668534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr4:33073900-33074194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:3961079-3960759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr4:11617928-11617760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr4:57978900-57978685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr4:29532231-29532466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:3358208-3357962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:6490863-6491108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:18516379-18516134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:36895856-36895612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr4:43320153-43320398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr4:8598648-8598894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:355397-355146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr4:34185374-34185613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:1931137-1931394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:9311720-9311464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:23114693-23114949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:47764687-47764944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:65224051-65224308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr4:66925488-66925246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr4:24445716-24445995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr4:43880592-43880314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
8-243
               

               
Cow position:
               
chr4:47718116-47718338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr4:1050144-1050364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr4:602473-602231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr4:528469-528221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr4:41954270-41954021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
14-249
               

               
Cow position:
               
chr4:1464448-1464686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
26-256
               

               
Cow position:
               
chr4:54955432-54955191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr4:21338527-21338737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
38-249
               

               
Cow position:
               
chr4:16056041-16055820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr4:25600154-25600362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
43-291
               

               
Cow position:
               
chr4:10408182-10407947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr4:1371558-1371758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
56-192
               

               
Cow position:
               
chr4:54190303-54190167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr4:30308030-30308206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
146-512
               

               
Cow position:
               
chr4:38209655-38210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
158-534
               

               
Cow position:
               
chr4:42423498-42423881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
193-480
               

               
Cow position:
               
chr4:47305347-47305055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
222-509
               

               
Cow position:
               
chr4:44903520-44903241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
223-445
               

               
Cow position:
               
chr4:46669218-46668991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
229-510
               

               
Cow position:
               
chr4:44772808-44773093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr4:38944035-38944332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
266, 11
               

               
Conread position:
               
236-522
               

               
Cow position:
               
chr4:45837408-45837695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
237-508
               

               
Cow position:
               
chr4:19119239-19118969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 34
               

               
Conread position:
               
242-532
               

               
Cow position:
               
chr4:7964432-7964727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
244-422
               

               
Cow position:
               
chr4:30944168-30943992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
246-428
               

               
Cow position:
               
chr4:63293666-63293491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
248-500
               

               
Cow position:
               
chr4:19578593-19578350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
248-502
               

               
Cow position:
               
chr4:4318944-4319196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
248-532
               

               
Cow position:
               
chr4:22138006-22138301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
248-534
               

               
Cow position:
               
chr4:59001929-59002208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
212, 23
               

               
Conread position:
               
249-416
               

               
Cow position:
               
chr4:42608949-42608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
249-483
               

               
Cow position:
               
chr4:21506759-21506981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
249-534
               

               
Cow position:
               
chr4:65463307-65463571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
250-408
               

               
Cow position:
               
chr4:19504130-19503980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
250-454
               

               
Cow position:
               
chr4:35974575-35974368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 136
               

               
Conread position:
               
250-455
               

               
Cow position:
               
chr4:39010261-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
250-485
               

               
Cow position:
               
chr4:19333593-19333359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
250-488
               

               
Cow position:
               
chr4:5790852-5790613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
250-531
               

               
Cow position:
               
chr4:20026896-20027177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr4:36290829-36290556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
250-534
               

               
Cow position:
               
chr4:34510036-34509764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr4:2681535-2681293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr4:18952189-18951929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
251-531
               

               
Cow position:
               
chr4:3283251-3283519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr4:19199075-19199363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr4:23846847-23847120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr4:63951956-63952238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr4:35982204-35981919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr4:37915132-37915412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr4:46176089-46176258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
100, 133
               

               
Conread position:
               
252-435
               

               
Cow position:
               
chr4:56395722-56395537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
252-477
               

               
Cow position:
               
chr4:34983296-34983515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
252-481
               

               
Cow position:
               
chr4:33838599-33838823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
208, 20
               

               
Conread position:
               
252-511
               

               
Cow position:
               
chr4:60363557-60363295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr4:1419430-1419152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr4:21391612-21391883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr4:48423074-48422805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
252-531
               

               
Cow position:
               
chr4:37991794-37991526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
255, 19
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr4:10915628-10915917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr4:53134803-53134518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
140, 81
               

               
Conread position:
               
253-427
               

               
Cow position:
               
chr4:38940735-38940910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr4:26959762-26959991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
253-488
               

               
Cow position:
               
chr4:44854085-44854320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
253-520
               

               
Cow position:
               
chr4:49158586-49158850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
253-525
               

               
Cow position:
               
chr4:17851056-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
207, 25
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr4:46061153-46060872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 139
               

               
Conread position:
               
254-416
               

               
Cow position:
               
chr4:19463752-19463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
254-530
               

               
Cow position:
               
chr4:59277267-59277550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr4:23925174-23925351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr4:11969658-11969419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
255-522
               

               
Cow position:
               
chr4:32693992-32693722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
256-534
               

               
Cow position:
               
chr4:31136958-31136677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
257-531
               

               
Cow position:
               
chr4:34022385-34022658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
203, 74
               

               
Conread position:
               
257-533
               

               
Cow position:
               
chr4:69169850-69169581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
261-481
               

               
Cow position:
               
chr4:60527377-60527157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
197, 5
               

               
Conread position:
               
261-515
               

               
Cow position:
               
chr4:26659497-26659242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
142, 91
               

               
Conread position:
               
261-532
               

               
Cow position:
               
chr4:23600365-23600105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
261-532
               

               
Cow position:
               
chr4:38935555-38935284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
262-488
               

               
Cow position:
               
chr4:386198-386422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
198, 119
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr4:19431494-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr4:8182438-8182712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
262-534
               

               
Cow position:
               
chr4:66172599-66172874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
264-530
               

               
Cow position:
               
chr4:48486190-48485922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 259
               

               
Conread position:
               
265-452
               

               
Cow position:
               
chr4:50494972-50494779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
265-517
               

               
Cow position:
               
chr4:4084915-4085176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 236
               

               
Conread position:
               
265-534
               

               
Cow position:
               
chr4:51851405-51851130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 87
               

               
Conread position:
               
266-415
               

               
Cow position:
               
chr4:10785948-10786095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
266-430
               

               
Cow position:
               
chr4:19330580-19330739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
266-439
               

               
Cow position:
               
chr4:34919082-34919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
266-442
               

               
Cow position:
               
chr4:28660354-28660533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
266-447
               

               
Cow position:
               
chr4:62794164-62794351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
266-480
               

               
Cow position:
               
chr4:18098869-18099084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
194, 92
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr4:54390822-54391058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
266-504
               

               
Cow position:
               
chr4:30974526-30974291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
112, 95
               

               
Conread position:
               
266-506
               

               
Cow position:
               
chr4:10558728-10558489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr4:46435526-46435268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr4:65173294-65173047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
194, 86
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr4:3688121-3687851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr4:21874370-21874100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr4:34641531-34641801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr4:60719284-60719027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
194, 38
               

               
Conread position:
               
266-533
               

               
Cow position:
               
chr4:22071480-22071727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr4:46566279-46566548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
194, 33
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr4:48152179-48152445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
267-466
               

               
Cow position:
               
chr4:51083149-51083345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
267-488
               

               
Cow position:
               
chr4:68590960-68590747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
267-530
               

               
Cow position:
               
chr4:4186308-4186051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr4:20147376-20147113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
193, 225
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr4:33970714-33970978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr4:51728265-51728002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
176, 74
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr4:68387979-68387717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
268-458
               

               
Cow position:
               
chr4:61887831-61887638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr4:13241829-13241576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr4:47731054-47730783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr4:21531449-21531720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
269-458
               

               
Cow position:
               
chr4:42373966-42374154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
269-472
               

               
Cow position:
               
chr4:41907393-41907596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
191, 83
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr4:17186159-17186423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr4:48409096-48409342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
191, 53
               

               
Conread position:
               
270-445
               

               
Cow position:
               
chr4:22215325-22215496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
271-532
               

               
Cow position:
               
chr4:52831828-52832091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 175
               

               
Conread position:
               
271-533
               

               
Cow position:
               
chr4:3421811-3421547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr4:28839797-28839552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
176, 63
               

               
Conread position:
               
272-531
               

               
Cow position:
               
chr4:3341141-3340880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
272-532
               

               
Cow position:
               
chr4:40414441-40414702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr4:53208466-53208220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 66
               

               
Conread position:
               
276-458
               

               
Cow position:
               
chr4:19123052-19122874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
276-534
               

               
Cow position:
               
chr4:54927248-54927516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
277-483
               

               
Cow position:
               
chr4:34653694-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
183, 73
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr4:46550568-46550306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
283-534
               

               
Cow position:
               
chr4:19097466-19097213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
284-487
               

               
Cow position:
               
chr4:26901496-26901298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
292-534
               

               
Cow position:
               
chr4:25537716-25537471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
312-504
               

               
Cow position:
               
chr4:48396647-48396847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr4:10379258-10379037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
324-532
               

               
Cow position:
               
chr4:53100942-53100726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
331-527
               

               
Cow position:
               
chr4:54541512-54541708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
334-528
               

               
Cow position:
               
chr4:58880838-58881031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
338-532
               

               
Cow position:
               
chr4:63095954-63096146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
339-534
               

               
Cow position:
               
chr4:19324097-19323898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
353-534
               

               
Cow position:
               
chr4:33433151-33433338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
355-534
               

               
Cow position:
               
chr4:24001862-24002041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
368-532
               

               
Cow position:
               
chr4:38952645-38952480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
378-532
               

               
Cow position:
               
chr4:620053-620206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 51
               
Show alignments to all cow chromosomes.