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Cow genome map

           
Conread name:
           
Pig1-57C11
        

               
Conread position:
               
2-153
               

               
Cow position:
               
chr9:22650805-22650650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr9:3567203-3567403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr9:28626380-28626575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr9:417881-418080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr9:60278372-60278585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 207
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr9:10315031-10314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr9:27034358-27034134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr9:15072166-15071951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr9:651437-651664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr9:3585952-3585729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:5003663-5003417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:9012759-9012512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:18510074-18510320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:37163158-37163403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:47001856-47001617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr9:59174507-59174753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr9:45873004-45872752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr9:3548520-3548774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr9:42568523-42568269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr9:33834623-33834875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr9:1252317-1252557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr9:12401894-12401639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr9:25755553-25755814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr9:2170707-2170437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr9:1996270-1996583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr9:31807190-31806868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr9:37971557-37971879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr9:59443504-59443319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr9:6830894-6831128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr9:10321471-10321235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr9:16175417-16175180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr9:29629098-29629343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr9:42309332-42309086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr9:59483020-59483263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:3006626-3006872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr9:17064748-17064986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr9:30672019-30671767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr9:59535748-59535501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr9:163841-164098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr9:16268009-16267753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr9:25483522-25483264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr9:50789215-50788962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr9:54360256-54360010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr9:59455950-59456270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr9:829910-830117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr9:831784-832030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr9:2500647-2500931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr9:6757215-6756991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr9:2199755-2199519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 166
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr9:31020452-31020231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr9:2052093-2051882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr9:2185607-2185342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
10-144
               

               
Cow position:
               
chr9:32968384-32968244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr9:1979588-1979446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr9:7062464-7062627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr9:7002196-7001958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr9:27933736-27933487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:781160-781407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:1076557-1076805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:4672249-4672001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:31194525-31194775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:34242956-34243206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr9:46626157-46626405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr9:10855842-10855568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr9:51183066-51183339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr9:4532132-4531932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
11-237
               

               
Cow position:
               
chr9:6051399-6051633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
14-143
               

               
Cow position:
               
chr9:29028591-29028724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr9:28021184-28020876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr9:34991284-34991059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
18-256
               

               
Cow position:
               
chr9:8969410-8969638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
96, 149
               

               
Conread position:
               
26-186
               

               
Cow position:
               
chr9:792882-793042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
155, 131
               

               
Conread position:
               
188-532
               

               
Cow position:
               
chr9:45285783-45285433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
220-499
               

               
Cow position:
               
chr9:12337682-12337965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
233-395
               

               
Cow position:
               
chr9:21816328-21816488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
241-505
               

               
Cow position:
               
chr9:52519017-52518754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
243-494
               

               
Cow position:
               
chr9:5104604-5104344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
102, 181
               

               
Conread position:
               
247-532
               

               
Cow position:
               
chr9:23956166-23955890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr9:61301170-61300973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
249-532
               

               
Cow position:
               
chr9:32670134-32669854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
249-534
               

               
Cow position:
               
chr9:6189551-6189276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
250-478
               

               
Cow position:
               
chr9:58132135-58131911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
250-512
               

               
Cow position:
               
chr9:47517013-47517271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
250-519
               

               
Cow position:
               
chr9:34410580-34410315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
250-534
               

               
Cow position:
               
chr9:56453159-56453428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
251-432
               

               
Cow position:
               
chr9:64140747-64140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
251-477
               

               
Cow position:
               
chr9:33101290-33101074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
193, 20
               

               
Conread position:
               
251-479
               

               
Cow position:
               
chr9:52689802-52689568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
251-504
               

               
Cow position:
               
chr9:35028350-35028095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
251-530
               

               
Cow position:
               
chr9:28747703-28747431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr9:6192644-6192368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr9:18380683-18380956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
209, 14
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr9:34286613-34286896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr9:39011651-39011376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
209, 14
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr9:61302817-61303099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
252-459
               

               
Cow position:
               
chr9:19718517-19718319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
252-504
               

               
Cow position:
               
chr9:60395232-60394979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
252-531
               

               
Cow position:
               
chr9:41728074-41728351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr9:19067583-19067880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
253-446
               

               
Cow position:
               
chr9:11380828-11380638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
253-479
               

               
Cow position:
               
chr9:11098634-11098413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
206, 11
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr9:6954437-6954153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
253-534
               

               
Cow position:
               
chr9:33584868-33584587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 101
               

               
Conread position:
               
254-446
               

               
Cow position:
               
chr9:36624110-36623917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
254-534
               

               
Cow position:
               
chr9:47591168-47590883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
255-463
               

               
Cow position:
               
chr9:5187041-5186842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
255-468
               

               
Cow position:
               
chr9:43202157-43202366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
205, 25
               

               
Conread position:
               
255-532
               

               
Cow position:
               
chr9:34375109-34374836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 216
               

               
Conread position:
               
256-458
               

               
Cow position:
               
chr9:42508647-42508852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 93
               

               
Conread position:
               
257-463
               

               
Cow position:
               
chr9:40603487-40603693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
174, 166
               

               
Conread position:
               
258-528
               

               
Cow position:
               
chr9:15215869-15215596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr9:6397963-6397688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
261-484
               

               
Cow position:
               
chr9:33151573-33151790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
199, 73
               

               
Conread position:
               
261-534
               

               
Cow position:
               
chr9:10144659-10144381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
261-534
               

               
Cow position:
               
chr9:48627847-48628126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
262-431
               

               
Cow position:
               
chr9:9494984-9495149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
262-458
               

               
Cow position:
               
chr9:32877883-32878074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
262-518
               

               
Cow position:
               
chr9:63361885-63361636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
198, 9
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr9:5263327-5263595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr9:9311683-9311954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr9:11299848-11299597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr9:40215072-40215335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 90
               

               
Conread position:
               
264-440
               

               
Cow position:
               
chr9:45740317-45740140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
265-460
               

               
Cow position:
               
chr9:151694-151890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 120
               

               
Conread position:
               
265-508
               

               
Cow position:
               
chr9:57131326-57131564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
265-519
               

               
Cow position:
               
chr9:27355746-27356006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 231
               

               
Conread position:
               
265-519
               

               
Cow position:
               
chr9:27358532-27358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 231
               

               
Conread position:
               
265-530
               

               
Cow position:
               
chr9:21460325-21460059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr9:8629084-8628822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
195, 83
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr9:52755024-52754763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 119
               

               
Conread position:
               
266-454
               

               
Cow position:
               
chr9:19771189-19771378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
266-455
               

               
Cow position:
               
chr9:32052105-32052293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
266-467
               

               
Cow position:
               
chr9:22447465-22447263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr9:22440644-22440424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
194, 73
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr9:4341327-4341100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr9:9596121-9595891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr9:24887034-24887265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
266-508
               

               
Cow position:
               
chr9:9573149-9573401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
266-517
               

               
Cow position:
               
chr9:34279230-34278976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr9:8636507-8636762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 36
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr9:13169836-13169568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr9:17840850-17840581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr9:51620273-51620531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 66
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr9:9459818-9460071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
159, 67
               

               
Conread position:
               
267-493
               

               
Cow position:
               
chr9:42586718-42586499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
193, 67
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr9:36627952-36628176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
193, 67
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr9:26279343-26279078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 229
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr9:11123649-11123389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr9:17872276-17872011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr9:61738751-61739021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
269-530
               

               
Cow position:
               
chr9:20847778-20848023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
271-457
               

               
Cow position:
               
chr9:24079139-24079321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
271-496
               

               
Cow position:
               
chr9:43159589-43159813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
271-526
               

               
Cow position:
               
chr9:64105737-64105994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
271-532
               

               
Cow position:
               
chr9:34689771-34689502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
82, 156
               

               
Conread position:
               
272-534
               

               
Cow position:
               
chr9:33822952-33823214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr9:30123768-30124018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
254, 77
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr9:33219119-33218854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
278-534
               

               
Cow position:
               
chr9:21387271-21387518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 63
               

               
Conread position:
               
279-456
               

               
Cow position:
               
chr9:52998536-52998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
279-463
               

               
Cow position:
               
chr9:1712866-1712681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
279-478
               

               
Cow position:
               
chr9:22165875-22165671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr9:34958210-34957959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
181, 73
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr9:55288045-55287799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr9:29195188-29194929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 245
               

               
Conread position:
               
281-534
               

               
Cow position:
               
chr9:54492982-54493234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
284-532
               

               
Cow position:
               
chr9:29006406-29006656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
176, 82
               

               
Conread position:
               
297-532
               

               
Cow position:
               
chr9:33120031-33119792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
334-496
               

               
Cow position:
               
chr9:55354509-55354671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
358-532
               

               
Cow position:
               
chr9:60027117-60027295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
363-532
               

               
Cow position:
               
chr9:19493541-19493370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
95, 135
               
Show alignments to all cow chromosomes.