Cow genome map
| Conread name: | Pig1-58H01 |
| Conread position: | 11-401 |
| Cow position: | chr17:22452251-22451861 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 179, 154 |
| Conread position: | 20-379 |
| Cow position: | chr17:22499256-22498897 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 159, 170 |
| Conread position: | 20-397 |
| Cow position: | chr17:22499088-22498711 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 170, 156 |
| Conread position: | 20-398 |
| Cow position: | chr17:22590131-22589753 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 174, 156 |
| Conread position: | 20-400 |
| Cow position: | chr17:22499172-22498792 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 72 |
| Conread position: | 20-400 |
| Cow position: | chr17:22552209-22551829 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 20-401 |
| Cow position: | chr17:22452410-22452029 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 183, 192 |
| Conread position: | 21-390 |
| Cow position: | chr17:22551872-22551501 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 178, 165 |
| Conread position: | 21-394 |
| Cow position: | chr17:22590214-22589841 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 86, 71 |
| Conread position: | 21-396 |
| Cow position: | chr17:22551956-22551581 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 21-396 |
| Cow position: | chr17:22552712-22552336 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 21-398 |
| Cow position: | chr17:22452157-22451780 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 169, 144 |
| Conread position: | 21-399 |
| Cow position: | chr17:22552544-22552166 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 21-400 |
| Cow position: | chr17:22552460-22552081 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 169, 150 |
| Conread position: | 21-400 |
| Cow position: | chr17:22553048-22552669 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 26-400 |
| Cow position: | chr17:22590293-22589919 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 29-333 |
| Cow position: | chr17:22451981-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 281, 290 |
| Conread position: | 29-397 |
| Cow position: | chr17:22552032-22551664 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 29-399 |
| Cow position: | chr17:22552368-22551998 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 161, 142 |
| Conread position: | 30-398 |
| Cow position: | chr17:22590037-22589669 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 191 |
| Conread position: | 30-400 |
| Cow position: | chr17:22452316-22451946 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 160, 152 |
| Conread position: | 41-400 |
| Cow position: | chr17:22473410-22473769 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 134 |
| Conread position: | 42-390 |
| Cow position: | chr17:22589521-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 42-399 |
| Cow position: | chr17:22552775-22552418 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 42-400 |
| Cow position: | chr17:22589773-22589415 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 157, 144 |
| Conread position: | 50-401 |
| Cow position: | chr17:22552598-22552248 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 52-414 |
| Cow position: | chr17:22552261-22551900 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 54-399 |
| Cow position: | chr17:22499390-22499045 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 149 |
| Conread position: | 57-399 |
| Cow position: | chr17:22589926-22589584 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 128, 133 |
| Conread position: | 60-399 |
| Cow position: | chr17:22553093-22552754 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 134, 126 |
| Conread position: | 63-400 |
| Cow position: | chr17:22473264-22473601 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 114, 124 |
| Conread position: | 145-414 |
| Cow position: | chr17:22473262-22473530 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 67 |
Show alignments to all cow chromosomes.