Cow genome map

Conread name: Pig1-58H01

Conread position: 1-400
Cow position: chr25:33157439-33157040 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 106, 99

Conread position: 1-401
Cow position: chr25:33127752-33128152 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 253
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 105, 90

Conread position: 2-324
Cow position: chr25:33157102-33156781 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 98

Conread position: 2-405
Cow position: chr25:34769669-34769266 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 252
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 104, 90

Conread position: 2-407
Cow position: chr25:34770005-34769600 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 90

Conread position: 5-400
Cow position: chr25:33298770-33299164 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 244
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 10-400
Cow position: chr25:33299026-33299416 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 238
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 90

Conread position: 10-401
Cow position: chr25:34447149-34447540 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 189, 172

Conread position: 10-407
Cow position: chr25:33157262-33156865 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 166

Conread position: 12-388
Cow position: chr25:33145059-33145435 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 156, 160

Conread position: 12-396
Cow position: chr25:33157176-33156792 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 170

Conread position: 16-400
Cow position: chr25:36800847-36801232 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 76

Conread position: 18-397
Cow position: chr25:34769905-34769526 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-401
Cow position: chr25:33299202-33299585 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 231
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 63

Conread position: 19-255
Cow position: chr25:36801103-36801339 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 77

Conread position: 19-375
Cow position: chr25:23420519-23420875 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 223
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 171, 152

Conread position: 19-401
Cow position: chr25:33298699-33299081 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 81

Conread position: 20-387
Cow position: chr25:33299456-33299823 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 80

Conread position: 20-397
Cow position: chr25:34769819-34769442 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 174, 192

Conread position: 20-400
Cow position: chr25:33157336-33156956 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 86, 72

Conread position: 20-400
Cow position: chr25:33298868-33299248 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 232
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 80

Conread position: 20-400
Cow position: chr25:33299288-33299668 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 234
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 79

Conread position: 20-405
Cow position: chr25:23420436-23420821 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 72

Conread position: 20-405
Cow position: chr25:33305349-33304968 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 245
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 28

Conread position: 21-397
Cow position: chr25:34714088-34714464 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 230
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 279, 292

Conread position: 21-398
Cow position: chr25:23420353-23420730 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 158, 187

Conread position: 22-397
Cow position: chr25:36800686-36801061 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 236
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 100

Conread position: 22-407
Cow position: chr25:33305909-33305528 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 233
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 353, 77

Conread position: 26-398
Cow position: chr25:34770149-34769777 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 241
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 65

Conread position: 27-399
Cow position: chr25:34447502-34447867 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 63

Conread position: 28-397
Cow position: chr25:34447335-34447704 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 29-396
Cow position: chr25:34447252-34447619 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 231
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 77, 71

Conread position: 29-399
Cow position: chr25:34770062-34769692 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 159, 142

Conread position: 30-342
Cow position: chr25:36801030-36801343 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 198
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 157, 138

Conread position: 30-380
Cow position: chr25:33298626-33298976 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 154

Conread position: 40-399
Cow position: chr25:34447095-34447454 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 217
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 67, 60

Conread position: 42-406
Cow position: chr25:33127877-33128241 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 50

Conread position: 48-379
Cow position: chr25:366722-367053 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 25

Conread position: 49-397
Cow position: chr25:346446-346794 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 57, 42

Conread position: 52-397
Cow position: chr25:22235830-22236175 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 138, 125

Conread position: 54-397
Cow position: chr25:33157470-33157127 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 30, 37

Conread position: 56-400
Cow position: chr25:36801380-36801724 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 217
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 35

Conread position: 57-397
Cow position: chr25:33298569-33298909 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 211
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 150

Conread position: 57-397
Cow position: chr25:36800805-36801145 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 35

Conread position: 57-400
Cow position: chr25:33298485-33298828 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 213
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 39

Conread position: 57-400
Cow position: chr25:36801549-36801892 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 277, 285

Conread position: 58-394
Cow position: chr25:34713873-34714209 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 149, 154

Conread position: 65-400
Cow position: chr25:34446952-34447287 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 111

Conread position: 68-414
Cow position: chr25:23420316-23420661 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 104

Conread position: 70-407
Cow position: chr25:33145033-33145370 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 21

Conread position: 72-407
Cow position: chr25:33127739-33128074 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 94-401
Cow position: chr25:34770167-34769858 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 84

Conread position: 119-400
Cow position: chr25:33127703-33127983 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 9

Conread position: 135-397
Cow position: chr25:22235829-22236091 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 33

Conread position: 221-401
Cow position: chr25:34770122-34769942 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.