Cow genome map
| Conread name: | Pig1-58H01 |
| Conread position: | 1-397 |
| Cow position: | chr8:48407008-48406612 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 90 |
| Conread position: | 2-397 |
| Cow position: | chr8:46816416-46816811 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-398 |
| Cow position: | chr8:46816081-46816476 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 87 |
| Conread position: | 11-398 |
| Cow position: | chr8:48406916-48406527 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 11-398 |
| Cow position: | chr8:55580950-55581337 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 171, 157 |
| Conread position: | 11-400 |
| Cow position: | chr8:55581202-55581591 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 190, 154 |
| Conread position: | 12-396 |
| Cow position: | chr8:48407417-48407033 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 20-394 |
| Cow position: | chr8:48407241-48406867 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 20-397 |
| Cow position: | chr8:55581043-55581420 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 20-398 |
| Cow position: | chr8:45201407-45201785 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-399 |
| Cow position: | chr8:45201323-45201702 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 169, 163 |
| Conread position: | 20-407 |
| Cow position: | chr8:46816938-46817325 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 21-397 |
| Cow position: | chr8:46816855-46817231 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 21-398 |
| Cow position: | chr8:46816015-46816392 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 21-398 |
| Cow position: | chr8:46816519-46816896 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 169, 163 |
| Conread position: | 21-400 |
| Cow position: | chr8:46816351-46816730 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 22-398 |
| Cow position: | chr8:48407575-48407199 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 26-398 |
| Cow position: | chr8:46816692-46817064 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 26-400 |
| Cow position: | chr8:46816188-46816562 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-401 |
| Cow position: | chr8:48406731-48406356 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 200, 193 |
| Conread position: | 26-401 |
| Cow position: | chr8:48407319-48406944 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 27-398 |
| Cow position: | chr8:45201078-45201449 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 28-390 |
| Cow position: | chr8:48407485-48407123 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 163, 137 |
| Conread position: | 28-391 |
| Cow position: | chr8:48406645-48406280 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 195, 187 |
| Conread position: | 28-398 |
| Cow position: | chr8:48407149-48406779 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 29-397 |
| Cow position: | chr8:45201500-45201868 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 29-398 |
| Cow position: | chr8:45201164-45201533 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 197, 186 |
| Conread position: | 29-398 |
| Cow position: | chr8:46816779-46817148 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 40-398 |
| Cow position: | chr8:55580895-55581253 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 41-379 |
| Cow position: | chr8:45201596-45201934 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 59 |
| Conread position: | 52-394 |
| Cow position: | chr8:46815962-46816304 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 119 |
| Conread position: | 65-400 |
| Cow position: | chr8:45200948-45201283 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 66-400 |
| Cow position: | chr8:46815889-46816226 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 72-399 |
| Cow position: | chr8:46816318-46816645 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 104 |
| Conread position: | 72-407 |
| Cow position: | chr8:48407609-48407274 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 107 |
| Conread position: | 73-398 |
| Cow position: | chr8:45201040-45201365 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 133-420 |
| Cow position: | chr8:48407630-48407346 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 14 |
Show alignments to all cow chromosomes.