Cow genome map
| Conread name: | Pig1-58H01 |
| Conread position: | 2-398 |
| Cow position: | chrX:25325300-25324904 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 196, 181 |
| Conread position: | 3-339 |
| Cow position: | chrX:13826744-13826407 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 3-400 |
| Cow position: | chrX:25325551-25325154 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 103, 97 |
| Conread position: | 9-331 |
| Cow position: | chrX:14181264-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-400 |
| Cow position: | chrX:25310026-25310407 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 19-400 |
| Cow position: | chrX:25310194-25310575 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-408 |
| Cow position: | chrX:29045040-29044651 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 20-398 |
| Cow position: | chrX:25309859-25310237 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 181, 202 |
| Conread position: | 20-407 |
| Cow position: | chrX:25324862-25324475 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 179, 163 |
| Conread position: | 20-411 |
| Cow position: | chrX:25309775-25310166 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 21-307 |
| Cow position: | chrX:25324525-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 102 |
| Conread position: | 21-390 |
| Cow position: | chrX:25324777-25324408 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 21-394 |
| Cow position: | chrX:25324945-25324572 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 21-399 |
| Cow position: | chrX:25325029-25324651 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 85, 71 |
| Conread position: | 22-399 |
| Cow position: | chrX:25324692-25324315 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 160, 149 |
| Conread position: | 22-400 |
| Cow position: | chrX:25325196-25324818 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 23-407 |
| Cow position: | chrX:29045288-29044904 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 30-400 |
| Cow position: | chrX:29045197-29044827 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 40-391 |
| Cow position: | chrX:25324590-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 40-397 |
| Cow position: | chrX:25325094-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 40-400 |
| Cow position: | chrX:25325766-25325406 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 66 |
| Conread position: | 40-400 |
| Cow position: | chrX:29045103-29044743 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 42-400 |
| Cow position: | chrX:25309713-25310071 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 157, 133 |
| Conread position: | 54-397 |
| Cow position: | chrX:13826945-13826602 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 57-407 |
| Cow position: | chrX:25310148-25310498 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 63-398 |
| Cow position: | chrX:29045332-29044997 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 71-400 |
| Cow position: | chrX:29045723-29045394 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 151 |
| Conread position: | 120-399 |
| Cow position: | chrX:29045758-29045479 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 130-400 |
| Cow position: | chrX:29045832-29045562 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 47 |
Show alignments to all cow chromosomes.