Cow genome map
| Conread name: | Pig1-62K19 |
| Conread position: | 1-137 |
| Cow position: | chr11:57873856-57873722 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 2-130 |
| Cow position: | chr11:22499336-22499464 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 2-137 |
| Cow position: | chr11:46999009-46998877 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 2-169 |
| Cow position: | chr11:42043965-42044128 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 4-128 |
| Cow position: | chr11:42083497-42083374 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-130 |
| Cow position: | chr11:83230373-83230497 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 4-131 |
| Cow position: | chr11:39060573-39060702 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 4-135 |
| Cow position: | chr11:14470394-14470265 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 4-136 |
| Cow position: | chr11:23586667-23586531 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 4-137 |
| Cow position: | chr11:8147870-8148006 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 4-137 |
| Cow position: | chr11:36658794-36658928 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 4-137 |
| Cow position: | chr11:40573306-40573440 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-137 |
| Cow position: | chr11:59872955-59872824 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-137 |
| Cow position: | chr11:77705783-77705648 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-137 |
| Cow position: | chr11:81174913-81174783 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 4-138 |
| Cow position: | chr11:83033210-83033345 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 4-165 |
| Cow position: | chr11:7590217-7590058 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-165 |
| Cow position: | chr11:55494708-55494544 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 4-165 |
| Cow position: | chr11:67600813-67600649 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 5-165 |
| Cow position: | chr11:67246814-67246657 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-137 |
| Cow position: | chr11:57170804-57170937 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 7-169 |
| Cow position: | chr11:33341119-33341286 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-135 |
| Cow position: | chr11:82940600-82940727 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 8-135 |
| Cow position: | chr11:84385614-84385741 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 8-136 |
| Cow position: | chr11:249457-249591 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-137 |
| Cow position: | chr11:377617-377751 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-137 |
| Cow position: | chr11:1362443-1362583 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-137 |
| Cow position: | chr11:34144895-34145022 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 8-137 |
| Cow position: | chr11:36238801-36238676 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 8-137 |
| Cow position: | chr11:71501107-71501239 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 8-145 |
| Cow position: | chr11:80412989-80413127 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 8-156 |
| Cow position: | chr11:61858878-61859030 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 8-162 |
| Cow position: | chr11:9221707-9221859 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 8-164 |
| Cow position: | chr11:36112444-36112287 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 72 |
| Conread position: | 8-165 |
| Cow position: | chr11:18572825-18572666 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 8-168 |
| Cow position: | chr11:30934441-30934288 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-168 |
| Cow position: | chr11:71009153-71009002 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 59 |
| Conread position: | 8-169 |
| Cow position: | chr11:16907026-16907183 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 8-169 |
| Cow position: | chr11:48697469-48697312 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 8-170 |
| Cow position: | chr11:13500040-13499878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 8-170 |
| Cow position: | chr11:70756502-70756343 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 9-118 |
| Cow position: | chr11:35926885-35926995 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 9-120 |
| Cow position: | chr11:33527071-33526963 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-136 |
| Cow position: | chr11:63482406-63482532 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-137 |
| Cow position: | chr11:34032181-34032309 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 10-115 |
| Cow position: | chr11:27565352-27565250 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 10-130 |
| Cow position: | chr11:22931951-22932079 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-135 |
| Cow position: | chr11:8988211-8988334 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 10-135 |
| Cow position: | chr11:32436353-32436226 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 10-137 |
| Cow position: | chr11:5031756-5031881 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 10-137 |
| Cow position: | chr11:14094400-14094531 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 10-137 |
| Cow position: | chr11:33348167-33348291 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 10-137 |
| Cow position: | chr11:63435540-63435410 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 10-137 |
| Cow position: | chr11:65607669-65607798 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 10-137 |
| Cow position: | chr11:71492839-71492962 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 10-139 |
| Cow position: | chr11:85703722-85703597 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 10-157 |
| Cow position: | chr11:17493498-17493353 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 12-130 |
| Cow position: | chr11:6633727-6633605 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-135 |
| Cow position: | chr11:13043129-13043251 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 12-136 |
| Cow position: | chr11:70273323-70273199 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-137 |
| Cow position: | chr11:21427976-21428100 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-137 |
| Cow position: | chr11:53778633-53778508 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 12-159 |
| Cow position: | chr11:71341448-71341593 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 12-168 |
| Cow position: | chr11:17860139-17860290 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 12-172 |
| Cow position: | chr11:41175932-41176090 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 12-176 |
| Cow position: | chr11:33310990-33310829 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 12-177 |
| Cow position: | chr11:40478836-40478995 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-178 |
| Cow position: | chr11:42002931-42003089 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 12-204 |
| Cow position: | chr11:50472333-50472144 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 185, 27 |
| Conread position: | 13-118 |
| Cow position: | chr11:32398654-32398548 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-130 |
| Cow position: | chr11:12111437-12111554 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-130 |
| Cow position: | chr11:42359130-42359012 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-132 |
| Cow position: | chr11:58990518-58990401 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-133 |
| Cow position: | chr11:63434042-63434159 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-135 |
| Cow position: | chr11:2811714-2811836 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-135 |
| Cow position: | chr11:4652957-4653083 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:2309889-2309764 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:6233864-6233987 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:9270708-9270833 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:18341025-18341148 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:18698895-18698770 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 13-137 |
| Cow position: | chr11:28993722-28993839 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:33345461-33345336 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:38874386-38874510 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:39118771-39118645 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 13-137 |
| Cow position: | chr11:42066875-42066753 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 13-137 |
| Cow position: | chr11:48932571-48932692 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:52690504-52690629 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:55761884-55761763 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:58588362-58588240 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:66188301-66188430 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:72375667-72375793 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-137 |
| Cow position: | chr11:75965636-75965757 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 13-137 |
| Cow position: | chr11:76114662-76114547 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-145 |
| Cow position: | chr11:6194421-6194292 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 13-162 |
| Cow position: | chr11:16540878-16540727 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 13-164 |
| Cow position: | chr11:80530382-80530234 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 13-165 |
| Cow position: | chr11:10076784-10076631 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 13-165 |
| Cow position: | chr11:11752501-11752652 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 57 |
| Conread position: | 13-165 |
| Cow position: | chr11:30597009-30596852 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 13-165 |
| Cow position: | chr11:38194173-38194019 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 13-165 |
| Cow position: | chr11:43430438-43430586 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 112 |
| Conread position: | 13-165 |
| Cow position: | chr11:51626980-51626831 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 13-165 |
| Cow position: | chr11:67804765-67804619 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 13-165 |
| Cow position: | chr11:77683185-77683032 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 13-168 |
| Cow position: | chr11:17831206-17831359 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 13-168 |
| Cow position: | chr11:48474719-48474567 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 13-169 |
| Cow position: | chr11:52983691-52983536 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 13-173 |
| Cow position: | chr11:43360762-43360924 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 13-175 |
| Cow position: | chr11:23138039-23138202 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 13-175 |
| Cow position: | chr11:31506865-31506702 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 126 |
| Conread position: | 13-175 |
| Cow position: | chr11:62979506-62979345 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 123 |
| Conread position: | 14-137 |
| Cow position: | chr11:27719304-27719430 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-137 |
| Cow position: | chr11:34829764-34829888 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 14-162 |
| Cow position: | chr11:65843080-65843229 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 14-165 |
| Cow position: | chr11:53130828-53130676 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 16-137 |
| Cow position: | chr11:45898043-45898160 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 16-162 |
| Cow position: | chr11:83000520-83000667 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 16-169 |
| Cow position: | chr11:8846480-8846635 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 17-137 |
| Cow position: | chr11:23232504-23232623 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 18-123 |
| Cow position: | chr11:34622967-34622860 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 18-130 |
| Cow position: | chr11:21398973-21398859 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-135 |
| Cow position: | chr11:51729297-51729183 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-136 |
| Cow position: | chr11:14466476-14466595 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 18-137 |
| Cow position: | chr11:2084154-2084034 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 18-137 |
| Cow position: | chr11:6202453-6202339 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-137 |
| Cow position: | chr11:36286706-36286589 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-137 |
| Cow position: | chr11:49057414-49057295 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-138 |
| Cow position: | chr11:49152960-49152843 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-140 |
| Cow position: | chr11:11125674-11125552 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-165 |
| Cow position: | chr11:8339395-8339541 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 18-172 |
| Cow position: | chr11:68913151-68913000 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-176 |
| Cow position: | chr11:27386328-27386486 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 18-178 |
| Cow position: | chr11:31526456-31526614 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 19-137 |
| Cow position: | chr11:65435864-65435747 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 19-140 |
| Cow position: | chr11:64638515-64638639 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 19-169 |
| Cow position: | chr11:62880616-62880763 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 20-138 |
| Cow position: | chr11:41986037-41986152 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 20-169 |
| Cow position: | chr11:48042026-48042175 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-137 |
| Cow position: | chr11:8545009-8545120 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 21-137 |
| Cow position: | chr11:83066504-83066387 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 21-180 |
| Cow position: | chr11:36672036-36672192 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 23-137 |
| Cow position: | chr11:49149045-49148932 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 24-172 |
| Cow position: | chr11:15525972-15525818 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 26-135 |
| Cow position: | chr11:30110965-30110857 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 28-135 |
| Cow position: | chr11:10837525-10837634 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 33-137 |
| Cow position: | chr11:47586354-47586455 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 33-137 |
| Cow position: | chr11:63516823-63516719 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 49 |
Show alignments to all cow chromosomes.