Cow genome map

Conread name: Pig1-62K19

Conread position: 3-165
Cow position: chr12:8868870-8869033 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 4-120
Cow position: chr12:7978045-7977924 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 4-122
Cow position: chr12:33851365-33851245 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 4-135
Cow position: chr12:44595802-44595937 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 4-136
Cow position: chr12:18943650-18943785 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 68

Conread position: 4-137
Cow position: chr12:6410727-6410860 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 74

Conread position: 4-139
Cow position: chr12:22882064-22881923 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 4-165
Cow position: chr12:19691226-19691390 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 91

Conread position: 4-165
Cow position: chr12:30210491-30210326 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 99

Conread position: 4-176
Cow position: chr12:41215877-41216051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 6-137
Cow position: chr12:23798104-23797975 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 76

Conread position: 8-135
Cow position: chr12:18420474-18420345 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 102

Conread position: 8-136
Cow position: chr12:4162359-4162494 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 8-137
Cow position: chr12:3906477-3906345 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 8-137
Cow position: chr12:23855840-23855709 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 8-137
Cow position: chr12:23916846-23916715 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 8-137
Cow position: chr12:24107545-24107673 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 8-137
Cow position: chr12:37137522-37137651 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 31

Conread position: 8-139
Cow position: chr12:28582504-28582634 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 114
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 8-140
Cow position: chr12:42966999-42966867 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 16

Conread position: 8-165
Cow position: chr12:31429567-31429726 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 27

Conread position: 8-169
Cow position: chr12:34007305-34007147 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 10

Conread position: 8-178
Cow position: chr12:4596468-4596298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 66

Conread position: 9-169
Cow position: chr12:3623693-3623536 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 10-134
Cow position: chr12:19715038-19715165 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 10-137
Cow position: chr12:37008705-37008832 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 10-169
Cow position: chr12:9914787-9914631 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 10-176
Cow position: chr12:4820952-4820788 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 129, 14

Conread position: 11-170
Cow position: chr12:38484391-38484555 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 12-137
Cow position: chr12:4719943-4719818 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 92

Conread position: 12-137
Cow position: chr12:8943228-8943346 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 12-137
Cow position: chr12:11587770-11587645 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 105, 99

Conread position: 12-137
Cow position: chr12:20326770-20326646 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 58

Conread position: 12-137
Cow position: chr12:29995468-29995588 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 12-137
Cow position: chr12:38184590-38184469 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 12-164
Cow position: chr12:27563381-27563532 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 90

Conread position: 12-164
Cow position: chr12:44013844-44013991 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 56

Conread position: 12-165
Cow position: chr12:42181133-42181294 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 12-175
Cow position: chr12:31517175-31517338 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 121

Conread position: 12-176
Cow position: chr12:35771025-35771184 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 13-130
Cow position: chr12:1030975-1030857 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 13-136
Cow position: chr12:18963933-18964054 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 13-136
Cow position: chr12:25452452-25452574 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 55

Conread position: 13-136
Cow position: chr12:30805848-30805727 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr12:5714625-5714500 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 13-137
Cow position: chr12:6241314-6241184 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 97

Conread position: 13-137
Cow position: chr12:7000608-7000732 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr12:7110192-7110072 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 13-137
Cow position: chr12:12304382-12304259 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 107

Conread position: 13-137
Cow position: chr12:15050621-15050745 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr12:20479336-20479451 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 13-137
Cow position: chr12:26217829-26217954 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 62

Conread position: 13-137
Cow position: chr12:33976194-33976072 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 13-138
Cow position: chr12:25193045-25192923 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 13-138
Cow position: chr12:44517743-44517865 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 13-157
Cow position: chr12:17881856-17881716 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 13-165
Cow position: chr12:10491267-10491116 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 54

Conread position: 13-165
Cow position: chr12:24559353-24559202 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 74

Conread position: 13-165
Cow position: chr12:29921790-29921937 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 70

Conread position: 13-165
Cow position: chr12:40910294-40910445 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 89

Conread position: 13-165
Cow position: chr12:44920030-44919880 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 13-168
Cow position: chr12:12030833-12030990 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 131

Conread position: 13-168
Cow position: chr12:29969574-29969424 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 55

Conread position: 13-172
Cow position: chr12:15938266-15938429 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 13-172
Cow position: chr12:30753715-30753563 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 13-178
Cow position: chr12:3197264-3197101 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 158, 54

Conread position: 13-183
Cow position: chr12:19258275-19258105 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 122

Conread position: 14-137
Cow position: chr12:25188180-25188056 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 70

Conread position: 14-165
Cow position: chr12:3950351-3950501 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 100

Conread position: 18-137
Cow position: chr12:4341754-4341867 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 18-137
Cow position: chr12:6210168-6210285 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 50

Conread position: 18-137
Cow position: chr12:42254657-42254539 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 18-168
Cow position: chr12:43582765-43582615 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 81

Conread position: 18-172
Cow position: chr12:42234050-42233896 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 66

Conread position: 18-178
Cow position: chr12:10942277-10942120 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 131

Conread position: 18-185
Cow position: chr12:43551267-43551446 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 20-172
Cow position: chr12:27562840-27562990 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 23

Conread position: 22-137
Cow position: chr12:30590750-30590639 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 22-162
Cow position: chr12:11583376-11583242 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 22-165
Cow position: chr12:38774257-38774395 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 23-136
Cow position: chr12:30476467-30476355 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 24-161
Cow position: chr12:36012629-36012767 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 25-137
Cow position: chr12:22047453-22047344 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 28-131
Cow position: chr12:31959866-31959765 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 29-144
Cow position: chr12:24211392-24211278 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 34-187
Cow position: chr12:13017601-13017751 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 34

Conread position: 37-169
Cow position: chr12:32391819-32391688 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 31

Show alignments to all cow chromosomes.