Cow genome map

Conread name: Pig1-62K19

Conread position: 2-127
Cow position: chr14:1796185-1796312 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 2-137
Cow position: chr14:4203104-4202962 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 2-137
Cow position: chr14:20600381-20600517 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 74

Conread position: 2-137
Cow position: chr14:33643782-33643650 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 2-165
Cow position: chr14:45605088-45605249 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 37

Conread position: 2-176
Cow position: chr14:14187326-14187501 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 142

Conread position: 4-133
Cow position: chr14:33338479-33338346 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 4-134
Cow position: chr14:35018757-35018626 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 4-136
Cow position: chr14:8786551-8786421 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 65

Conread position: 4-136
Cow position: chr14:23478823-23478951 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 4-137
Cow position: chr14:12511901-12511770 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 4-137
Cow position: chr14:19618755-19618619 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 68

Conread position: 4-137
Cow position: chr14:19951564-19951701 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 4-137
Cow position: chr14:23424257-23424389 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 67

Conread position: 4-137
Cow position: chr14:23443018-23443150 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 67

Conread position: 4-137
Cow position: chr14:28115191-28115054 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 4-177
Cow position: chr14:21284624-21284793 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 16

Conread position: 7-137
Cow position: chr14:41966247-41966372 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 7-166
Cow position: chr14:34331327-34331166 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 110

Conread position: 8-119
Cow position: chr14:43192845-43192952 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 8-130
Cow position: chr14:4282506-4282383 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 8-130
Cow position: chr14:33774047-33773925 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 73

Conread position: 8-137
Cow position: chr14:3564284-3564413 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 64

Conread position: 8-137
Cow position: chr14:12035410-12035539 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 61

Conread position: 8-137
Cow position: chr14:37422787-37422656 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 8-137
Cow position: chr14:37447463-37447338 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 8-137
Cow position: chr14:42437025-42437157 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 8-137
Cow position: chr14:47672881-47672754 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 31

Conread position: 8-139
Cow position: chr14:20712691-20712556 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 8-164
Cow position: chr14:36289797-36289642 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 112

Conread position: 8-168
Cow position: chr14:13809940-13810098 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 23

Conread position: 8-168
Cow position: chr14:36555151-36554995 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 8-177
Cow position: chr14:24981459-24981623 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 9-137
Cow position: chr14:33828163-33828292 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 76

Conread position: 9-137
Cow position: chr14:40165425-40165555 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 63

Conread position: 9-165
Cow position: chr14:45718259-45718108 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 10-125
Cow position: chr14:12954380-12954263 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 108

Conread position: 10-130
Cow position: chr14:7695273-7695392 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 10-135
Cow position: chr14:46654537-46654414 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 10-136
Cow position: chr14:25002040-25002168 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 10-136
Cow position: chr14:48740863-48740740 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 10-137
Cow position: chr14:14316889-14317014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 10-139
Cow position: chr14:16352350-16352479 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-182
Cow position: chr14:27275167-27275336 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 98, 57

Conread position: 12-126
Cow position: chr14:37883908-37883793 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 12-135
Cow position: chr14:35503370-35503494 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 12-136
Cow position: chr14:42419265-42419143 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 12-137
Cow position: chr14:1978062-1977939 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 57

Conread position: 12-137
Cow position: chr14:22966763-22966884 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 12-137
Cow position: chr14:27919731-27919606 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 57

Conread position: 12-137
Cow position: chr14:33341762-33341888 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 12-137
Cow position: chr14:49021891-49021771 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-163
Cow position: chr14:44257931-44258084 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 12-165
Cow position: chr14:7558433-7558275 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 12-169
Cow position: chr14:1868375-1868222 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 107, 55

Conread position: 12-173
Cow position: chr14:40754239-40754078 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 125

Conread position: 12-178
Cow position: chr14:6541716-6541553 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 13-133
Cow position: chr14:12127401-12127284 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 13-135
Cow position: chr14:38144098-38143979 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 66

Conread position: 13-136
Cow position: chr14:21933334-21933210 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 96

Conread position: 13-137
Cow position: chr14:4877222-4877100 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr14:5630171-5630293 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr14:16033014-16033140 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 55

Conread position: 13-137
Cow position: chr14:16834331-16834457 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr14:18309298-18309165 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr14:19129515-19129641 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 13-137
Cow position: chr14:20384976-20384853 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 55

Conread position: 13-137
Cow position: chr14:22473004-22472878 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 13-165
Cow position: chr14:8101799-8101949 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 55

Conread position: 13-165
Cow position: chr14:19863424-19863272 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 55

Conread position: 13-166
Cow position: chr14:48412873-48412719 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 13-168
Cow position: chr14:10858442-10858592 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 61

Conread position: 13-169
Cow position: chr14:25385878-25385723 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 13-171
Cow position: chr14:22941719-22941558 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 127

Conread position: 13-173
Cow position: chr14:23761880-23762040 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 19

Conread position: 13-176
Cow position: chr14:41302821-41302665 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 16-169
Cow position: chr14:41127909-41128058 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 17-137
Cow position: chr14:7482069-7482187 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 57

Conread position: 18-137
Cow position: chr14:1859599-1859484 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 18-137
Cow position: chr14:9020040-9020159 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 31

Conread position: 18-137
Cow position: chr14:33309489-33309375 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 18-137
Cow position: chr14:33457029-33456909 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 18-168
Cow position: chr14:33830315-33830457 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 19-138
Cow position: chr14:20361741-20361624 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 54

Conread position: 19-176
Cow position: chr14:37151645-37151491 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 54

Conread position: 20-165
Cow position: chr14:25231634-25231487 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 123

Conread position: 22-167
Cow position: chr14:41180694-41180546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 23-131
Cow position: chr14:8964567-8964672 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 32-137
Cow position: chr14:27312451-27312558 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 33-137
Cow position: chr14:24991851-24991954 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 33-165
Cow position: chr14:39422564-39422431 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 33-168
Cow position: chr14:23591263-23591394 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 33-169
Cow position: chr14:37435274-37435137 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 99

Conread position: 39-137
Cow position: chr14:19513378-19513280 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 29

Conread position: 43-169
Cow position: chr14:6419263-6419142 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.