Cow genome map

Conread name: Pig1-62K19

Conread position: 2-137
Cow position: chr19:6687966-6688098 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 2-137
Cow position: chr19:26754073-26753938 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 77

Conread position: 2-165
Cow position: chr19:42205963-42205806 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 66

Conread position: 2-165
Cow position: chr19:51185461-51185298 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 77

Conread position: 4-129
Cow position: chr19:15092101-15092226 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 115

Conread position: 4-135
Cow position: chr19:14348048-14347914 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 4-136
Cow position: chr19:43441203-43441066 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 4-137
Cow position: chr19:7637200-7637339 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 4-137
Cow position: chr19:11191585-11191717 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 4-137
Cow position: chr19:15863016-15863142 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 4-137
Cow position: chr19:41946218-41946085 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 68

Conread position: 6-137
Cow position: chr19:14928626-14928756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 56

Conread position: 7-137
Cow position: chr19:10173084-10173216 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 42

Conread position: 7-165
Cow position: chr19:10172033-10171874 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 7-165
Cow position: chr19:50682414-50682568 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 8-131
Cow position: chr19:51400983-51401107 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 60

Conread position: 8-137
Cow position: chr19:729715-729845 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 8-137
Cow position: chr19:22153818-22153951 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 105

Conread position: 8-137
Cow position: chr19:25652729-25652853 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 8-137
Cow position: chr19:34166398-34166270 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 115

Conread position: 8-137
Cow position: chr19:38339953-38340080 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 60

Conread position: 8-137
Cow position: chr19:47118469-47118596 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 8-143
Cow position: chr19:53243448-53243583 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 116, 66

Conread position: 8-165
Cow position: chr19:4503251-4503088 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 97

Conread position: 8-165
Cow position: chr19:19662075-19661918 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 142

Conread position: 8-165
Cow position: chr19:21816994-21816835 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 60

Conread position: 8-165
Cow position: chr19:31824982-31825139 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 135

Conread position: 8-166
Cow position: chr19:22134121-22134274 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 61

Conread position: 8-168
Cow position: chr19:18788077-18788237 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 141, 55

Conread position: 8-172
Cow position: chr19:6516298-6516131 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 9-146
Cow position: chr19:4329023-4329159 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 10-129
Cow position: chr19:3870633-3870511 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 10-130
Cow position: chr19:10676835-10676952 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 60

Conread position: 10-137
Cow position: chr19:39254420-39254552 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 10-165
Cow position: chr19:31595327-31595171 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 11-169
Cow position: chr19:53542867-53543021 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 58

Conread position: 12-129
Cow position: chr19:30910167-30910049 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 12-137
Cow position: chr19:268377-268253 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 12-137
Cow position: chr19:39649052-39649176 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 57

Conread position: 12-137
Cow position: chr19:47859292-47859415 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 56

Conread position: 12-169
Cow position: chr19:11424292-11424442 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 12-170
Cow position: chr19:52185742-52185904 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 12-171
Cow position: chr19:55475619-55475468 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 12-184
Cow position: chr19:10971074-10971240 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 13-130
Cow position: chr19:7884602-7884485 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 76

Conread position: 13-130
Cow position: chr19:39385019-39385132 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 13-135
Cow position: chr19:2221053-2221177 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 13-135
Cow position: chr19:15887298-15887423 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 13-136
Cow position: chr19:2577588-2577467 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 101

Conread position: 13-136
Cow position: chr19:17273711-17273829 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 13-136
Cow position: chr19:19919439-19919561 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 13-136
Cow position: chr19:25526306-25526180 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 13-136
Cow position: chr19:32451107-32450981 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 13-136
Cow position: chr19:41024246-41024124 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 13-137
Cow position: chr19:4800764-4800642 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 13-137
Cow position: chr19:6079336-6079460 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr19:6531909-6531789 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 13-137
Cow position: chr19:15442783-15442664 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 24

Conread position: 13-137
Cow position: chr19:16694009-16694143 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 13-137
Cow position: chr19:20935776-20935653 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 13-137
Cow position: chr19:25807278-25807403 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 13-137
Cow position: chr19:52750736-52750860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-140
Cow position: chr19:40450041-40449912 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 13-140
Cow position: chr19:47986881-47986752 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 13-155
Cow position: chr19:32506095-32506241 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 58

Conread position: 13-162
Cow position: chr19:42695018-42694863 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 13-165
Cow position: chr19:7404354-7404507 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 13-165
Cow position: chr19:33116619-33116468 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 55

Conread position: 13-165
Cow position: chr19:46094614-46094768 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 13-168
Cow position: chr19:43058556-43058407 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 50

Conread position: 13-169
Cow position: chr19:35540317-35540161 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 128, 55

Conread position: 13-171
Cow position: chr19:12094033-12093870 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 129

Conread position: 13-207
Cow position: chr19:22449904-22450101 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 132

Conread position: 16-137
Cow position: chr19:25673503-25673620 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 17-160
Cow position: chr19:47727555-47727701 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 18-136
Cow position: chr19:8864766-8864648 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 18-136
Cow position: chr19:14992907-14993022 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 18-136
Cow position: chr19:46822473-46822359 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 18-137
Cow position: chr19:2734467-2734350 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 18-137
Cow position: chr19:4511496-4511617 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 18-137
Cow position: chr19:25825505-25825387 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 18-137
Cow position: chr19:31536144-31536025 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 18-137
Cow position: chr19:52215178-52215063 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 18-165
Cow position: chr19:11443006-11442854 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 18-168
Cow position: chr19:56063412-56063563 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 126

Conread position: 18-172
Cow position: chr19:21335588-21335740 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 71

Conread position: 18-178
Cow position: chr19:46918867-46918710 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 19-137
Cow position: chr19:7492845-7492729 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 23-137
Cow position: chr19:13121262-13121374 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 80

Conread position: 24-190
Cow position: chr19:21043379-21043214 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 30-137
Cow position: chr19:50849826-50849719 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 33-136
Cow position: chr19:6417599-6417495 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 33-137
Cow position: chr19:19174154-19174044 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 33-137
Cow position: chr19:33932146-33932249 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 33-169
Cow position: chr19:39587523-39587653 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 36-137
Cow position: chr19:43877393-43877492 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 36-165
Cow position: chr19:10786369-10786496 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 36-168
Cow position: chr19:1898238-1898367 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 38-136
Cow position: chr19:35808139-35808238 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.