Cow genome map

Conread name: Pig1-62K19

Conread position: 2-136
Cow position: chr20:33976577-33976436 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 2-165
Cow position: chr20:4334439-4334599 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 70

Conread position: 4-137
Cow position: chr20:7442047-7442174 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 4-137
Cow position: chr20:14572274-14572406 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 70

Conread position: 4-137
Cow position: chr20:22484948-22484816 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 82

Conread position: 4-137
Cow position: chr20:28067334-28067473 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 110

Conread position: 4-165
Cow position: chr20:35797698-35797534 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 4-166
Cow position: chr20:24902204-24902374 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 4-169
Cow position: chr20:6096406-6096573 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 78

Conread position: 7-137
Cow position: chr20:6424053-6423925 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 115
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 7-169
Cow position: chr20:14879875-14879710 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 139

Conread position: 8-120
Cow position: chr20:3599315-3599424 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 8-137
Cow position: chr20:17765246-17765375 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 64

Conread position: 8-137
Cow position: chr20:18392186-18392307 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 8-137
Cow position: chr20:23064750-23064877 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 8-137
Cow position: chr20:39728535-39728402 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 8-169
Cow position: chr20:15565742-15565907 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 77

Conread position: 8-170
Cow position: chr20:11188720-11188878 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 8-170
Cow position: chr20:13795066-13794908 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 66

Conread position: 8-209
Cow position: chr20:11359547-11359749 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 63

Conread position: 9-137
Cow position: chr20:33067280-33067412 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 9-165
Cow position: chr20:36633897-36633744 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 10-137
Cow position: chr20:16548199-16548324 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 10-137
Cow position: chr20:19751387-19751261 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 64

Conread position: 10-165
Cow position: chr20:22313080-22313233 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 93

Conread position: 10-182
Cow position: chr20:30119492-30119663 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 65

Conread position: 11-137
Cow position: chr20:36741554-36741429 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 11-164
Cow position: chr20:30817618-30817461 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 12-137
Cow position: chr20:6890791-6890670 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 12-137
Cow position: chr20:24000720-24000844 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 12-137
Cow position: chr20:36040551-36040427 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 90

Conread position: 12-143
Cow position: chr20:11135684-11135814 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 12-159
Cow position: chr20:16941211-16941358 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 16

Conread position: 12-161
Cow position: chr20:10200423-10200272 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 12-165
Cow position: chr20:23541080-23541232 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 58

Conread position: 12-165
Cow position: chr20:34001312-34001465 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 121

Conread position: 12-176
Cow position: chr20:21714833-21714672 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 12-176
Cow position: chr20:35146098-35145938 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 12-177
Cow position: chr20:16492150-16491985 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 70

Conread position: 12-187
Cow position: chr20:23506393-23506564 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 13-130
Cow position: chr20:34777256-34777140 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 13-135
Cow position: chr20:20056409-20056529 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 45

Conread position: 13-136
Cow position: chr20:11482058-11482180 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 13-137
Cow position: chr20:5078703-5078577 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 13-137
Cow position: chr20:6240444-6240568 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr20:6603117-6602993 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 27

Conread position: 13-137
Cow position: chr20:7659137-7659265 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 59

Conread position: 13-137
Cow position: chr20:9537215-9537090 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 55

Conread position: 13-137
Cow position: chr20:10772282-10772157 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 13-137
Cow position: chr20:13025538-13025656 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 13-137
Cow position: chr20:13967180-13967306 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 13-137
Cow position: chr20:14980433-14980560 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 13-137
Cow position: chr20:21019643-21019518 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 43

Conread position: 13-137
Cow position: chr20:23103299-23103173 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 13-137
Cow position: chr20:34901648-34901522 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 13-137
Cow position: chr20:35009661-35009790 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 13-137
Cow position: chr20:35958724-35958599 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 13-138
Cow position: chr20:6903390-6903269 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 13-138
Cow position: chr20:9267028-9267153 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 102

Conread position: 13-139
Cow position: chr20:33144477-33144601 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 62

Conread position: 13-139
Cow position: chr20:39016796-39016925 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 13-140
Cow position: chr20:9473538-9473664 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 15

Conread position: 13-159
Cow position: chr20:42197389-42197251 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 13-165
Cow position: chr20:5636555-5636409 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 13-165
Cow position: chr20:20359706-20359859 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 13-169
Cow position: chr20:29805582-29805739 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 120

Conread position: 13-169
Cow position: chr20:29845127-29844974 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-170
Cow position: chr20:21928981-21928823 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 132, 67

Conread position: 13-170
Cow position: chr20:40511680-40511838 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 47

Conread position: 13-172
Cow position: chr20:17251793-17251634 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 17

Conread position: 14-137
Cow position: chr20:4621268-4621391 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 18

Conread position: 16-137
Cow position: chr20:7622991-7623110 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 17-135
Cow position: chr20:12995933-12996055 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 17-165
Cow position: chr20:24711912-24711761 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 17-171
Cow position: chr20:15568877-15569028 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 51

Conread position: 18-130
Cow position: chr20:31261796-31261683 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 18-137
Cow position: chr20:10348822-10348700 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 18-137
Cow position: chr20:22704366-22704245 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 18-137
Cow position: chr20:28594357-28594236 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 65

Conread position: 18-152
Cow position: chr20:21428233-21428098 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 115

Conread position: 18-169
Cow position: chr20:33435093-33435248 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 18-170
Cow position: chr20:9433658-9433506 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 58

Conread position: 18-183
Cow position: chr20:5078269-5078107 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 19-166
Cow position: chr20:17904229-17904084 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 19-177
Cow position: chr20:41403647-41403493 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 19-182
Cow position: chr20:37357678-37357517 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 0

Conread position: 21-165
Cow position: chr20:18185635-18185494 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 54

Conread position: 23-137
Cow position: chr20:28832037-28831922 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 32-137
Cow position: chr20:21345486-21345381 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 33-137
Cow position: chr20:396573-396466 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 33-137
Cow position: chr20:37272771-37272667 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 48

Conread position: 33-176
Cow position: chr20:23936348-23936493 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 58

Conread position: 40-136
Cow position: chr20:3781374-3781472 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.