Cow genome map

Conread name: Pig1-62K19

Conread position: 1-172
Cow position: chr24:11840212-11840039 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 71

Conread position: 2-137
Cow position: chr24:34565143-34565011 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 2-145
Cow position: chr24:27900755-27900606 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 3-137
Cow position: chr24:43364384-43364246 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 110

Conread position: 3-177
Cow position: chr24:40850180-40850010 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 4-135
Cow position: chr24:31036368-31036237 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 63

Conread position: 4-136
Cow position: chr24:17104548-17104685 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 4-136
Cow position: chr24:31324307-31324169 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 4-137
Cow position: chr24:6102849-6102715 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 114

Conread position: 4-137
Cow position: chr24:15508522-15508652 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 36

Conread position: 4-137
Cow position: chr24:20943186-20943053 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 85

Conread position: 4-137
Cow position: chr24:24061785-24061924 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 4-161
Cow position: chr24:19769511-19769351 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 132

Conread position: 4-168
Cow position: chr24:30544844-30545007 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 58

Conread position: 4-185
Cow position: chr24:29606011-29606205 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 86

Conread position: 6-134
Cow position: chr24:6957517-6957391 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 50

Conread position: 8-129
Cow position: chr24:27418084-27418207 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 8-136
Cow position: chr24:43200256-43200390 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 113

Conread position: 8-137
Cow position: chr24:18484976-18485111 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 8-137
Cow position: chr24:35074107-35073979 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 8-137
Cow position: chr24:35576521-35576648 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 8-137
Cow position: chr24:40837790-40837663 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 32

Conread position: 8-169
Cow position: chr24:27052479-27052638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 68

Conread position: 9-130
Cow position: chr24:3493897-3493779 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 9-137
Cow position: chr24:19634086-19633958 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 83

Conread position: 9-137
Cow position: chr24:35150535-35150408 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 111
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 59

Conread position: 9-169
Cow position: chr24:29679296-29679454 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 72

Conread position: 9-169
Cow position: chr24:44040992-44041155 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 131

Conread position: 10-118
Cow position: chr24:7046737-7046843 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 10-137
Cow position: chr24:24755459-24755331 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 60

Conread position: 10-137
Cow position: chr24:27906451-27906324 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 59

Conread position: 10-140
Cow position: chr24:31159631-31159500 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 58

Conread position: 10-160
Cow position: chr24:19736321-19736471 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 63

Conread position: 10-174
Cow position: chr24:41986008-41985841 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 95

Conread position: 11-137
Cow position: chr24:28721903-28721777 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 60

Conread position: 12-120
Cow position: chr24:39911023-39911134 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 12-134
Cow position: chr24:28553544-28553663 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 12-135
Cow position: chr24:19800857-19800735 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 63

Conread position: 12-135
Cow position: chr24:38006698-38006818 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 12-137
Cow position: chr24:10125884-10125758 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 12-137
Cow position: chr24:16895427-16895550 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 12-137
Cow position: chr24:42007750-42007626 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 12-140
Cow position: chr24:17943162-17943291 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 61

Conread position: 12-165
Cow position: chr24:29170973-29170830 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 12-168
Cow position: chr24:17752102-17752255 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 56

Conread position: 12-168
Cow position: chr24:27290881-27290726 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 102

Conread position: 12-169
Cow position: chr24:33944411-33944257 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 12-176
Cow position: chr24:10841197-10841363 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 127

Conread position: 12-176
Cow position: chr24:39905446-39905600 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 12-180
Cow position: chr24:27874605-27874448 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 56

Conread position: 13-129
Cow position: chr24:18615010-18614893 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 13-130
Cow position: chr24:10300092-10299974 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 13-137
Cow position: chr24:7917352-7917476 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr24:16645311-16645437 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 13-137
Cow position: chr24:18970499-18970621 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 69

Conread position: 13-137
Cow position: chr24:24457241-24457359 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 13-137
Cow position: chr24:28690694-28690574 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 13-137
Cow position: chr24:30483939-30484064 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 108
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 60

Conread position: 13-137
Cow position: chr24:39523440-39523561 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 13-145
Cow position: chr24:16895122-16895251 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 13-165
Cow position: chr24:17955435-17955583 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 13-165
Cow position: chr24:26732460-26732310 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 126, 55

Conread position: 13-165
Cow position: chr24:32054670-32054518 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-178
Cow position: chr24:24662122-24662284 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 16-138
Cow position: chr24:41405895-41405782 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 16-165
Cow position: chr24:35794729-35794878 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 105

Conread position: 18-121
Cow position: chr24:28045756-28045653 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 18-133
Cow position: chr24:18741568-18741680 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 18-165
Cow position: chr24:29595805-29595952 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 50

Conread position: 18-165
Cow position: chr24:32204791-32204936 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 18-165
Cow position: chr24:32369911-32370058 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 55

Conread position: 18-170
Cow position: chr24:40130133-40129982 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 130

Conread position: 20-137
Cow position: chr24:43432792-43432679 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 20-140
Cow position: chr24:34782786-34782902 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 20-142
Cow position: chr24:27968086-27967958 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 21-137
Cow position: chr24:42103375-42103262 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 21-169
Cow position: chr24:39218839-39218985 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 76

Conread position: 22-137
Cow position: chr24:15861598-15861714 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 22-161
Cow position: chr24:27040048-27039910 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 38

Conread position: 24-137
Cow position: chr24:16625488-16625602 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 24-137
Cow position: chr24:27552892-27552782 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 28-169
Cow position: chr24:36554839-36554979 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 101

Conread position: 33-165
Cow position: chr24:18695608-18695478 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 33-169
Cow position: chr24:31382890-31382751 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 34-169
Cow position: chr24:30226928-30226798 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 119, 45

Conread position: 43-135
Cow position: chr24:16509949-16509859 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.