Cow genome map

Conread name: Pig1-62K19

Conread position: 1-137
Cow position: chr28:20409443-20409308 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 113

Conread position: 2-136
Cow position: chr28:5931405-5931269 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 2-137
Cow position: chr28:8147810-8147946 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 70

Conread position: 4-137
Cow position: chr28:7549007-7549144 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 4-137
Cow position: chr28:19025954-19026096 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 4-137
Cow position: chr28:25806624-25806488 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 84

Conread position: 4-137
Cow position: chr28:26103753-26103624 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 66

Conread position: 4-165
Cow position: chr28:11426490-11426654 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 69

Conread position: 4-165
Cow position: chr28:18186607-18186442 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 60

Conread position: 7-136
Cow position: chr28:5792752-5792623 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-137
Cow position: chr28:7697935-7698064 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-137
Cow position: chr28:16252813-16252944 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 8-138
Cow position: chr28:5144474-5144603 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 74

Conread position: 8-140
Cow position: chr28:5193375-5193233 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 8-140
Cow position: chr28:27161279-27161415 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 8-166
Cow position: chr28:25728241-25728086 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 21

Conread position: 8-167
Cow position: chr28:3726931-3726770 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 136

Conread position: 9-137
Cow position: chr28:21598209-21598338 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 10-137
Cow position: chr28:11866624-11866751 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 71

Conread position: 10-137
Cow position: chr28:16407134-16407006 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 10-137
Cow position: chr28:26743667-26743539 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 79

Conread position: 10-164
Cow position: chr28:21502433-21502286 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 11-137
Cow position: chr28:18354288-18354407 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 12-131
Cow position: chr28:3160914-3161032 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 12-133
Cow position: chr28:19222112-19222230 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 12-137
Cow position: chr28:5166807-5166682 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 56

Conread position: 12-137
Cow position: chr28:8347770-8347647 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 12-137
Cow position: chr28:12363118-12363245 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 12-137
Cow position: chr28:21380920-21380794 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 12-137
Cow position: chr28:26922329-26922451 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 12-168
Cow position: chr28:20313316-20313160 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 12-169
Cow position: chr28:4881201-4881351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 12-169
Cow position: chr28:23410286-23410439 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 12-171
Cow position: chr28:17288255-17288102 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 12-171
Cow position: chr28:23447785-23447942 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 12-176
Cow position: chr28:26982699-26982860 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 12-189
Cow position: chr28:18625273-18625096 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 55

Conread position: 13-123
Cow position: chr28:17012256-17012362 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 13-136
Cow position: chr28:25249392-25249270 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 55

Conread position: 13-137
Cow position: chr28:3449341-3449217 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 13-137
Cow position: chr28:21355269-21355139 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 48

Conread position: 13-137
Cow position: chr28:21363785-21363661 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 55

Conread position: 13-137
Cow position: chr28:23007692-23007818 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 13-137
Cow position: chr28:32174667-32174545 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 42

Conread position: 13-137
Cow position: chr28:32365882-32365758 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 72

Conread position: 13-140
Cow position: chr28:8408772-8408647 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 13-165
Cow position: chr28:616424-616273 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 129

Conread position: 13-165
Cow position: chr28:30746692-30746840 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 13-170
Cow position: chr28:2752456-2752610 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 60

Conread position: 13-172
Cow position: chr28:4307859-4308021 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 125

Conread position: 13-178
Cow position: chr28:19564190-19564351 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 108

Conread position: 13-185
Cow position: chr28:3011231-3011402 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 128

Conread position: 16-136
Cow position: chr28:5297317-5297198 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 17-133
Cow position: chr28:13176647-13176762 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 51

Conread position: 18-137
Cow position: chr28:28903630-28903752 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 18-139
Cow position: chr28:30865452-30865333 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 50

Conread position: 18-140
Cow position: chr28:13865879-13865755 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 55

Conread position: 18-172
Cow position: chr28:5826983-5826833 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 19-135
Cow position: chr28:9099968-9099852 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-137
Cow position: chr28:33052068-33051944 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 22-165
Cow position: chr28:26269360-26269217 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 122

Conread position: 25-140
Cow position: chr28:8681813-8681929 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 26-136
Cow position: chr28:19394644-19394533 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 28-137
Cow position: chr28:10053306-10053417 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 28-162
Cow position: chr28:34877944-34878079 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 32-137
Cow position: chr28:22739811-22739708 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 33-137
Cow position: chr28:5773654-5773552 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 33-165
Cow position: chr28:118032-118164 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 33-176
Cow position: chr28:19024163-19024020 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 52

Conread position: 33-185
Cow position: chr28:20968842-20968991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 35

Show alignments to all cow chromosomes.