Cow genome map
| Conread name: | Pig1-62K19 | 
| Conread position: | 1-137 | 
| Cow position: | chr7:18253588-18253454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 1-137 | 
| Cow position: | chr7:41879402-41879543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 1-137 | 
| Cow position: | chr7:44986745-44986604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 1-170 | 
| Cow position: | chr7:35286549-35286716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 21, 59 | 
| Conread position: | 1-184 | 
| Cow position: | chr7:40308432-40308610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 2-135 | 
| Cow position: | chr7:40051669-40051801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 18, 62 | 
| Conread position: | 2-136 | 
| Cow position: | chr7:48721813-48721949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 2-169 | 
| Cow position: | chr7:67873283-67873110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 3-136 | 
| Cow position: | chr7:32710892-32711022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 65, 76 | 
| Conread position: | 3-138 | 
| Cow position: | chr7:53989142-53989005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 67, 78 | 
| Conread position: | 4-125 | 
| Cow position: | chr7:29505203-29505077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 4-134 | 
| Cow position: | chr7:48714942-48714807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 4-135 | 
| Cow position: | chr7:39838794-39838925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:3336462-3336599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:18947659-18947793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 18, 37 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:27283762-27283635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:33720123-33719986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 17, 68 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:35274992-35275128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 4-137 | 
| Cow position: | chr7:64364440-64364574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 18, 80 | 
| Conread position: | 4-168 | 
| Cow position: | chr7:11066567-11066399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 64, 137 | 
| Conread position: | 4-174 | 
| Cow position: | chr7:68857500-68857671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 20, 132 | 
| Conread position: | 6-137 | 
| Cow position: | chr7:44589771-44589898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 7-136 | 
| Cow position: | chr7:41327953-41328087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 7-137 | 
| Cow position: | chr7:35893500-35893369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 15, 115 | 
| Conread position: | 7-137 | 
| Cow position: | chr7:40067746-40067612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 15, 68 | 
| Conread position: | 7-137 | 
| Cow position: | chr7:40952779-40952909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 60, 26 | 
| Conread position: | 8-130 | 
| Cow position: | chr7:20176624-20176751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 8-136 | 
| Cow position: | chr7:58862800-58862933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:2172828-2172702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:3283443-3283316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:3311923-3311796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:11869756-11869886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 71, 17 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:23251482-23251610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 76, 60 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:23636787-23636659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 11, 60 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:30931893-30932023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 70, 79 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:32372941-32372811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:34412194-34412321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:44596618-44596747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 69, 56 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:51638483-51638615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 70, 52 | 
| Conread position: | 8-137 | 
| Cow position: | chr7:63679157-63679030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 8-138 | 
| Cow position: | chr7:52758554-52758428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 8, 61 | 
| Conread position: | 8-138 | 
| Cow position: | chr7:58428159-58428023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 8-139 | 
| Cow position: | chr7:36774451-36774317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 14, 116 | 
| Conread position: | 8-160 | 
| Cow position: | chr7:39518377-39518223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 23, 126 | 
| Conread position: | 8-164 | 
| Cow position: | chr7:2816346-2816197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 106, 20 | 
| Conread position: | 8-164 | 
| Cow position: | chr7:39823517-39823674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 6, 135 | 
| Conread position: | 8-164 | 
| Cow position: | chr7:68315321-68315170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 8-165 | 
| Cow position: | chr7:33698039-33697880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 14, 27 | 
| Conread position: | 8-165 | 
| Cow position: | chr7:45747761-45747918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 13, 80 | 
| Conread position: | 9-137 | 
| Cow position: | chr7:19267287-19267416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 73 | 
| Conread position: | 9-137 | 
| Cow position: | chr7:40189635-40189506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 10, 77 | 
| Conread position: | 9-137 | 
| Cow position: | chr7:51673500-51673625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 71 | 
| Conread position: | 9-171 | 
| Cow position: | chr7:9146726-9146564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 64, 15 | 
| Conread position: | 9-190 | 
| Cow position: | chr7:9108543-9108362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 60, 75 | 
| Conread position: | 10-130 | 
| Cow position: | chr7:2884419-2884299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 10-136 | 
| Cow position: | chr7:23568654-23568783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 14, 114 | 
| Conread position: | 10-137 | 
| Cow position: | chr7:14536199-14536328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 10-137 | 
| Cow position: | chr7:15855244-15855366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 10-137 | 
| Cow position: | chr7:19981768-19981892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 10-160 | 
| Cow position: | chr7:15566831-15566682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 9, 98 | 
| Conread position: | 10-171 | 
| Cow position: | chr7:53269278-53269113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 58, 29 | 
| Conread position: | 10-184 | 
| Cow position: | chr7:56081674-56081506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 65, 80 | 
| Conread position: | 11-170 | 
| Cow position: | chr7:24932335-24932494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 89, 65 | 
| Conread position: | 12-130 | 
| Cow position: | chr7:19797852-19797975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 12-136 | 
| Cow position: | chr7:4129704-4129830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 56, 70 | 
| Conread position: | 12-137 | 
| Cow position: | chr7:168590-168716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 12-137 | 
| Cow position: | chr7:24220744-24220623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 12-137 | 
| Cow position: | chr7:40008905-40008773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 12-137 | 
| Cow position: | chr7:48020497-48020373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 57 | 
| Conread position: | 12-137 | 
| Cow position: | chr7:48406419-48406543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 12-165 | 
| Cow position: | chr7:61790276-61790430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 72, 61 | 
| Conread position: | 12-170 | 
| Cow position: | chr7:41293670-41293830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 70, 61 | 
| Conread position: | 12-171 | 
| Cow position: | chr7:25195618-25195463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 12-173 | 
| Cow position: | chr7:11783352-11783516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 69, 56 | 
| Conread position: | 12-177 | 
| Cow position: | chr7:54513329-54513500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 12-180 | 
| Cow position: | chr7:63112699-63112862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 13-135 | 
| Cow position: | chr7:58923473-58923352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 69, 55 | 
| Conread position: | 13-136 | 
| Cow position: | chr7:38696918-38696801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-136 | 
| Cow position: | chr7:63946511-63946630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-136 | 
| Cow position: | chr7:64135392-64135511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 13-137 | 
| Cow position: | chr7:147489-147364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 69, 30 | 
| Conread position: | 13-137 | 
| Cow position: | chr7:17757109-17756991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 13-137 | 
| Cow position: | chr7:34223769-34223643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-137 | 
| Cow position: | chr7:38429636-38429759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 38, 56 | 
| Conread position: | 13-137 | 
| Cow position: | chr7:45593114-45592992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 13-138 | 
| Cow position: | chr7:7506056-7506183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-139 | 
| Cow position: | chr7:6058203-6058075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 60, 104 | 
| Conread position: | 13-140 | 
| Cow position: | chr7:9136913-9136783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 13-140 | 
| Cow position: | chr7:57258948-57259078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-146 | 
| Cow position: | chr7:33914046-33913909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 13-165 | 
| Cow position: | chr7:13593844-13593693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 73, 127 | 
| Conread position: | 13-165 | 
| Cow position: | chr7:58953750-58953603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 74, 55 | 
| Conread position: | 13-167 | 
| Cow position: | chr7:42894519-42894370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 13-168 | 
| Cow position: | chr7:37952254-37952107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-168 | 
| Cow position: | chr7:40303190-40303341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 13-169 | 
| Cow position: | chr7:41745390-41745550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 55, 135 | 
| Conread position: | 13-170 | 
| Cow position: | chr7:34554341-34554184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 55, 102 | 
| Conread position: | 13-172 | 
| Cow position: | chr7:44454205-44454361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 13-184 | 
| Cow position: | chr7:40894617-40894449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 28, 56 | 
| Conread position: | 15-165 | 
| Cow position: | chr7:9800433-9800278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 17, 65 | 
| Conread position: | 16-137 | 
| Cow position: | chr7:26861377-26861256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 52, 13 | 
| Conread position: | 17-139 | 
| Cow position: | chr7:53606254-53606372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 18-136 | 
| Cow position: | chr7:9193167-9193290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 18-137 | 
| Cow position: | chr7:14524549-14524432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 18-137 | 
| Cow position: | chr7:15755376-15755497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 50, 87 | 
| Conread position: | 18-137 | 
| Cow position: | chr7:31694569-31694682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 18-137 | 
| Cow position: | chr7:64572989-64573110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 18-161 | 
| Cow position: | chr7:32079522-32079378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 18-163 | 
| Cow position: | chr7:39042668-39042527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 18-168 | 
| Cow position: | chr7:5212406-5212554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 18-171 | 
| Cow position: | chr7:47931726-47931877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 67, 55 | 
| Conread position: | 20-137 | 
| Cow position: | chr7:16022363-16022247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 20-169 | 
| Cow position: | chr7:60547595-60547745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 13, 118 | 
| Conread position: | 21-137 | 
| Cow position: | chr7:600403-600287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 21-137 | 
| Cow position: | chr7:22624035-22624151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 47 | 
| Conread position: | 21-137 | 
| Cow position: | chr7:54054656-54054540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 57, 47 | 
| Conread position: | 22-179 | 
| Cow position: | chr7:31882019-31881864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 137, 67 | 
| Conread position: | 23-137 | 
| Cow position: | chr7:44094869-44094989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 25-137 | 
| Cow position: | chr7:43103377-43103489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 29-168 | 
| Cow position: | chr7:5300332-5300466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 29-170 | 
| Cow position: | chr7:58350896-58351037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 49, 114 | 
| Conread position: | 33-137 | 
| Cow position: | chr7:7476392-7476499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 33-137 | 
| Cow position: | chr7:44942510-44942406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 33-165 | 
| Cow position: | chr7:12212544-12212675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 35, 71 | 
| Conread position: | 33-175 | 
| Cow position: | chr7:33805025-33804880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 33-182 | 
| Cow position: | chr7:27472754-27472904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 34 | 
| Conread position: | 37-172 | 
| Cow position: | chr7:39528940-39529073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 54, 0 | 
Show alignments to all cow chromosomes.
