Cow genome map

Conread name: Pig1-63I11

Conread position: 2-148
Cow position: chr12:23916810-23916666 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 2-154
Cow position: chr12:18420436-18420288 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 2-162
Cow position: chr12:7191298-7191452 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 2-168
Cow position: chr12:23855803-23855638 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 160, 31

Conread position: 2-172
Cow position: chr12:10491236-10491077 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 2-173
Cow position: chr12:6121327-6121153 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 50

Conread position: 2-198
Cow position: chr12:22540171-22539979 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 37

Conread position: 2-202
Cow position: chr12:44559552-44559360 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 148, 30

Conread position: 2-206
Cow position: chr12:38511872-38512072 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 40

Conread position: 2-207
Cow position: chr12:29899465-29899668 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 24

Conread position: 2-216
Cow position: chr12:43582739-43582538 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 80, 56

Conread position: 2-217
Cow position: chr12:35136623-35136409 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 79, 151

Conread position: 2-229
Cow position: chr12:35779961-35780180 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 2-233
Cow position: chr12:40028790-40029012 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 2-237
Cow position: chr12:4182727-4182957 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 182, 30

Conread position: 2-239
Cow position: chr12:3994922-3994686 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-251
Cow position: chr12:30661986-30662226 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 225, 36

Conread position: 2-264
Cow position: chr12:22047434-22047182 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-276
Cow position: chr12:7000639-7000890 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 2-280
Cow position: chr12:25456083-25455809 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 2-281
Cow position: chr12:8868911-8869188 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 39

Conread position: 2-281
Cow position: chr12:41474053-41473788 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 243, 39

Conread position: 2-290
Cow position: chr12:35771057-35771348 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 2-290
Cow position: chr12:42254632-42254343 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 2-292
Cow position: chr12:941604-941313 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 243, 124

Conread position: 2-295
Cow position: chr12:2286547-2286261 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 28

Conread position: 2-297
Cow position: chr12:44595846-44596136 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 37

Conread position: 2-298
Cow position: chr12:1773701-1773986 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-298
Cow position: chr12:18937370-18937064 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-298
Cow position: chr12:19866203-19865919 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 35

Conread position: 2-298
Cow position: chr12:27563413-27563700 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 2-298
Cow position: chr12:33323532-33323821 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-298
Cow position: chr12:40807361-40807073 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 24

Conread position: 2-298
Cow position: chr12:40910325-40910613 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 39

Conread position: 2-298
Cow position: chr12:47804121-47803832 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 43, 30

Conread position: 2-303
Cow position: chr12:36012649-36012936 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 2-307
Cow position: chr12:31228536-31228247 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-311
Cow position: chr12:46143786-46143486 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 30

Conread position: 2-331
Cow position: chr12:3950381-3950710 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 39

Conread position: 3-281
Cow position: chr12:3056096-3055830 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 242, 36

Conread position: 3-290
Cow position: chr12:26782847-26782566 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 36

Conread position: 4-170
Cow position: chr12:7299500-7299666 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 114, 34

Conread position: 4-178
Cow position: chr12:2670228-2670057 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 4-272
Cow position: chr12:26223025-26223281 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 28

Conread position: 5-190
Cow position: chr12:33851322-33851141 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 5-210
Cow position: chr12:1030941-1030746 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 21

Conread position: 5-222
Cow position: chr12:23574724-23574524 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 5-222
Cow position: chr12:24211374-24211170 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 5-238
Cow position: chr12:18766012-18766243 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 107

Conread position: 5-268
Cow position: chr12:5714591-5714336 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 5-278
Cow position: chr12:6410774-6411031 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 33

Conread position: 5-286
Cow position: chr12:30805814-30805543 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 233, 33

Conread position: 5-296
Cow position: chr12:42966961-42966680 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 27

Conread position: 5-297
Cow position: chr12:6241280-6240985 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 68

Conread position: 5-298
Cow position: chr12:31959847-31959570 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 232, 28

Conread position: 5-298
Cow position: chr12:35368603-35368314 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 27

Conread position: 6-163
Cow position: chr12:11587734-11587576 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 36

Conread position: 6-268
Cow position: chr12:9914749-9914496 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 211, 26

Conread position: 6-296
Cow position: chr12:31429608-31429877 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 6-298
Cow position: chr12:17881821-17881549 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 9-199
Cow position: chr12:3906430-3906245 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 9-243
Cow position: chr12:17702269-17702500 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 32

Conread position: 9-268
Cow position: chr12:5906013-5905764 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 236, 24

Conread position: 9-339
Cow position: chr12:1246260-1245928 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 175, 42

Conread position: 10-229
Cow position: chr12:23798057-23797850 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 163, 28

Conread position: 11-301
Cow position: chr12:3039465-3039188 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 132

Conread position: 13-268
Cow position: chr12:29694093-29694330 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 14-202
Cow position: chr12:25452495-25452673 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 18

Conread position: 14-204
Cow position: chr12:28748894-28748706 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 14-236
Cow position: chr12:46673278-46673489 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 14-268
Cow position: chr12:32391800-32391552 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 133, 18

Conread position: 14-290
Cow position: chr12:15938311-15938582 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 146

Conread position: 15-207
Cow position: chr12:12579074-12579256 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 16-214
Cow position: chr12:35378151-35377961 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 16

Conread position: 21-298
Cow position: chr12:34385562-34385837 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 100

Conread position: 23-337
Cow position: chr12:34466058-34466358 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 75

Conread position: 26-314
Cow position: chr12:5800976-5800701 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 27-212
Cow position: chr12:5459207-5459027 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 52

Conread position: 28-293
Cow position: chr12:42181198-42181459 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 13

Conread position: 33-281
Cow position: chr12:28650892-28650651 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 96

Conread position: 34-241
Cow position: chr12:42282898-42283102 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 92, 0

Conread position: 39-298
Cow position: chr12:11583325-11583083 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 50

Conread position: 41-249
Cow position: chr12:29779979-29780175 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 41-273
Cow position: chr12:34007233-34007001 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 47

Conread position: 41-280
Cow position: chr12:6720251-6720017 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 41-281
Cow position: chr12:20479401-20479618 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 41-290
Cow position: chr12:20326702-20326456 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 84

Conread position: 42-197
Cow position: chr12:18021523-18021372 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 87

Conread position: 42-235
Cow position: chr12:17774722-17774546 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 27

Conread position: 42-250
Cow position: chr12:12699838-12700049 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 86

Conread position: 42-255
Cow position: chr12:25320849-25320643 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 201, 83

Conread position: 42-268
Cow position: chr12:3510491-3510272 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 17

Conread position: 42-280
Cow position: chr12:40110310-40110079 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 203, 30

Conread position: 42-281
Cow position: chr12:8943294-8943526 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 14

Conread position: 42-290
Cow position: chr12:3568872-3568632 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 83

Conread position: 42-290
Cow position: chr12:19691307-19691550 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 164, 83

Conread position: 42-290
Cow position: chr12:31060046-31060298 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 42-297
Cow position: chr12:44013909-44014162 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 42-298
Cow position: chr12:10461927-10461683 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 202, 26

Conread position: 42-323
Cow position: chr12:2805120-2805394 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 43

Conread position: 42-324
Cow position: chr12:22260895-22261163 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 70

Conread position: 43-168
Cow position: chr12:27639172-27639297 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 43-236
Cow position: chr12:5940275-5940083 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 84

Conread position: 43-239
Cow position: chr12:28804922-28804730 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 0

Conread position: 43-250
Cow position: chr12:28559222-28559021 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 43-259
Cow position: chr12:3473061-3473274 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 45

Conread position: 43-267
Cow position: chr12:18040670-18040883 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 201, 58

Conread position: 43-275
Cow position: chr12:1443813-1444048 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 43-276
Cow position: chr12:42160620-42160854 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 165, 213

Conread position: 43-298
Cow position: chr12:9710283-9710528 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 201, 67

Conread position: 43-298
Cow position: chr12:18076460-18076213 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 202, 124

Conread position: 43-328
Cow position: chr12:9465536-9465815 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 30

Conread position: 44-298
Cow position: chr12:24440744-24440489 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 137, 82

Conread position: 45-238
Cow position: chr12:29161891-29162073 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 45-267
Cow position: chr12:14523866-14523632 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 45-268
Cow position: chr12:40270168-40270379 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 200, 83

Conread position: 45-276
Cow position: chr12:37993799-37994026 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 45-280
Cow position: chr12:16543652-16543875 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 223, 55

Conread position: 45-281
Cow position: chr12:3757113-3757343 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 57

Conread position: 45-281
Cow position: chr12:18769149-18769382 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 199, 57

Conread position: 45-281
Cow position: chr12:45820444-45820663 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 200, 50

Conread position: 45-282
Cow position: chr12:33458069-33457843 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 45-294
Cow position: chr12:30753647-30753408 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 111

Conread position: 45-298
Cow position: chr12:3071034-3070787 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 200, 65

Conread position: 45-298
Cow position: chr12:6226726-6226954 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 45-298
Cow position: chr12:25561294-25561048 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 56

Conread position: 45-314
Cow position: chr12:16851085-16851345 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 48

Conread position: 46-210
Cow position: chr12:15163073-15162915 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 161, 64

Conread position: 46-240
Cow position: chr12:24107622-24107802 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 46-275
Cow position: chr12:1848611-1848838 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 199, 62

Conread position: 46-290
Cow position: chr12:36568137-36568366 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 198, 74

Conread position: 47-185
Cow position: chr12:25444847-25444708 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 16

Conread position: 47-266
Cow position: chr12:31841364-31841150 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 47-336
Cow position: chr12:41581040-41580754 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 72

Conread position: 48-290
Cow position: chr12:40158317-40158554 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 48-301
Cow position: chr12:19869390-19869145 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 77

Conread position: 49-290
Cow position: chr12:29483971-29484206 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 61

Conread position: 50-248
Cow position: chr12:28257130-28257318 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 80, 98

Conread position: 50-297
Cow position: chr12:35218485-35218726 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 50-298
Cow position: chr12:1223424-1223665 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 53

Conread position: 50-298
Cow position: chr12:19039690-19039940 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 50-323
Cow position: chr12:35807599-35807330 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 52

Conread position: 51-194
Cow position: chr12:19243761-19243903 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 52-265
Cow position: chr12:4134588-4134375 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 68

Conread position: 53-217
Cow position: chr12:24180812-24180656 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 7

Conread position: 54-213
Cow position: chr12:20071660-20071822 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 125

Conread position: 54-225
Cow position: chr12:1092849-1093023 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 125

Conread position: 54-290
Cow position: chr12:19154700-19154926 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 189, 113

Conread position: 54-290
Cow position: chr12:19508650-19508887 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 54-291
Cow position: chr12:30596384-30596147 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 73

Conread position: 54-298
Cow position: chr12:28010984-28011222 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 56

Conread position: 54-320
Cow position: chr12:30728320-30728587 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 47

Conread position: 56-301
Cow position: chr12:3880339-3880586 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 63

Conread position: 57-278
Cow position: chr12:4866734-4866513 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 58, 125

Conread position: 58-222
Cow position: chr12:37190224-37190072 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 63-230
Cow position: chr12:42412308-42412474 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 65-262
Cow position: chr12:12178826-12178634 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 177, 55

Conread position: 68-298
Cow position: chr12:19420030-19420255 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 12

Conread position: 69-196
Cow position: chr12:17636533-17636410 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 70-197
Cow position: chr12:16310335-16310208 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 73-283
Cow position: chr12:3076720-3076931 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 76-213
Cow position: chr12:24577352-24577491 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 76-262
Cow position: chr12:23154569-23154753 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 13

Conread position: 76-289
Cow position: chr12:19124932-19125141 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 29, 18

Conread position: 76-298
Cow position: chr12:20316619-20316829 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 76-302
Cow position: chr12:31925542-31925326 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 169, 25

Conread position: 76-319
Cow position: chr12:43476251-43476014 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 169, 25

Conread position: 84-298
Cow position: chr12:45160619-45160832 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 196

Conread position: 86-297
Cow position: chr12:37123394-37123191 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 41

Show alignments to all cow chromosomes.