Cow genome map

Conread name: Pig1-63I11

Conread position: 2-161
Cow position: chr9:47446001-47445847 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 2-163
Cow position: chr9:8901200-8901042 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 30

Conread position: 2-167
Cow position: chr9:31638616-31638455 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 2-176
Cow position: chr9:11123458-11123293 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-176
Cow position: chr9:49417014-49417182 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 2-176
Cow position: chr9:50543399-50543225 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 158, 123

Conread position: 2-179
Cow position: chr9:14358190-14358360 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 2-181
Cow position: chr9:8920017-8920198 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 112

Conread position: 2-181
Cow position: chr9:33237416-33237592 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 39

Conread position: 2-187
Cow position: chr9:47500185-47500001 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 2-195
Cow position: chr9:31270807-31270994 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 36

Conread position: 2-198
Cow position: chr9:11198316-11198129 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 193, 39

Conread position: 2-211
Cow position: chr9:27279336-27279544 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 35

Conread position: 2-214
Cow position: chr9:50667448-50667653 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 30

Conread position: 2-215
Cow position: chr9:6338820-6339032 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-228
Cow position: chr9:6840020-6840254 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 2-235
Cow position: chr9:18217072-18216850 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 2-241
Cow position: chr9:25921850-25922079 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 73

Conread position: 2-244
Cow position: chr9:55889838-55890068 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 2-248
Cow position: chr9:34902082-34901852 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 2-249
Cow position: chr9:6225428-6225188 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 2-252
Cow position: chr9:9753364-9753128 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 116, 35

Conread position: 2-255
Cow position: chr9:22638129-22638370 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 2-259
Cow position: chr9:40105494-40105751 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 125, 30

Conread position: 2-264
Cow position: chr9:28354545-28354813 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 31

Conread position: 2-265
Cow position: chr9:5531972-5532233 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 2-266
Cow position: chr9:41283042-41283310 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 30

Conread position: 2-268
Cow position: chr9:4861411-4861673 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 0

Conread position: 2-268
Cow position: chr9:9416369-9416123 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 243, 36

Conread position: 2-269
Cow position: chr9:24997492-24997231 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 2-276
Cow position: chr9:17310538-17310270 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 49, 39

Conread position: 2-276
Cow position: chr9:29684169-29684437 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 120

Conread position: 2-276
Cow position: chr9:35849931-35850190 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-276
Cow position: chr9:64517072-64516805 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-280
Cow position: chr9:25546667-25546930 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 272, 30

Conread position: 2-280
Cow position: chr9:48118663-48118407 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 239, 30

Conread position: 2-281
Cow position: chr9:32307206-32306943 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 2-281
Cow position: chr9:35533926-35533655 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-284
Cow position: chr9:22443600-22443312 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 31

Conread position: 2-284
Cow position: chr9:22696249-22696516 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-287
Cow position: chr9:8723820-8724104 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 239, 70

Conread position: 2-290
Cow position: chr9:18002927-18002643 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 39

Conread position: 2-290
Cow position: chr9:63745837-63746110 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 2-293
Cow position: chr9:59172355-59172069 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 36

Conread position: 2-294
Cow position: chr9:3387716-3388001 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 243, 36

Conread position: 2-295
Cow position: chr9:10092367-10092084 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 37

Conread position: 2-296
Cow position: chr9:34000593-34000300 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 31

Conread position: 2-297
Cow position: chr9:823987-824268 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 243, 31

Conread position: 2-297
Cow position: chr9:22114609-22114319 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 9

Conread position: 2-297
Cow position: chr9:39681366-39681671 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 37

Conread position: 2-298
Cow position: chr9:5509751-5510038 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 2-298
Cow position: chr9:7363051-7363349 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 37

Conread position: 2-298
Cow position: chr9:8998376-8998669 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 127

Conread position: 2-298
Cow position: chr9:19714107-19714384 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 242, 36

Conread position: 2-298
Cow position: chr9:22318377-22318652 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 243, 36

Conread position: 2-298
Cow position: chr9:25964806-25964510 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 37

Conread position: 2-298
Cow position: chr9:26403812-26404103 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 36

Conread position: 2-298
Cow position: chr9:31640298-31640004 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 49

Conread position: 2-298
Cow position: chr9:47906254-47905966 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 42, 72

Conread position: 2-298
Cow position: chr9:52407191-52407484 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 2-298
Cow position: chr9:61997571-61997282 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-298
Cow position: chr9:64050534-64050246 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 22

Conread position: 2-301
Cow position: chr9:29035009-29034711 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 125

Conread position: 2-302
Cow position: chr9:22152059-22151770 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 2-303
Cow position: chr9:6934047-6933752 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 2-308
Cow position: chr9:30402398-30402096 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 2-314
Cow position: chr9:35167203-35167499 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 36

Conread position: 2-318
Cow position: chr9:1949948-1950258 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 2-318
Cow position: chr9:6089115-6089439 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 83

Conread position: 2-336
Cow position: chr9:5433659-5433985 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 2-336
Cow position: chr9:49279491-49279805 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 130

Conread position: 2-339
Cow position: chr9:35375452-35375778 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 37

Conread position: 2-345
Cow position: chr9:15805896-15805564 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 49

Conread position: 3-290
Cow position: chr9:53602455-53602718 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 242, 34

Conread position: 3-298
Cow position: chr9:18163131-18162838 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 76

Conread position: 3-302
Cow position: chr9:45756391-45756674 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 30

Conread position: 5-162
Cow position: chr9:11168760-11168911 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 5-199
Cow position: chr9:43443831-43444009 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 5-205
Cow position: chr9:17799656-17799850 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 120, 0

Conread position: 5-211
Cow position: chr9:58734398-58734601 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 191, 32

Conread position: 5-228
Cow position: chr9:40603975-40604193 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 116, 28

Conread position: 5-258
Cow position: chr9:32732661-32732411 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 36

Conread position: 5-264
Cow position: chr9:17928787-17929053 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 36

Conread position: 5-278
Cow position: chr9:8338057-8338324 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 239, 28

Conread position: 5-281
Cow position: chr9:42445953-42445688 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 5-296
Cow position: chr9:50606918-50606641 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 240, 40

Conread position: 5-298
Cow position: chr9:1952240-1951956 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 5-298
Cow position: chr9:16300539-16300254 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 28, 59

Conread position: 5-298
Cow position: chr9:21888198-21888483 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 19

Conread position: 5-298
Cow position: chr9:26057411-26057138 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 240, 10

Conread position: 5-298
Cow position: chr9:38343917-38344209 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 120

Conread position: 5-336
Cow position: chr9:54528542-54528869 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 33

Conread position: 6-223
Cow position: chr9:58972468-58972255 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 54

Conread position: 6-229
Cow position: chr9:29091823-29092048 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 118, 33

Conread position: 6-300
Cow position: chr9:3070391-3070109 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 35

Conread position: 6-314
Cow position: chr9:5500884-5501177 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 9-244
Cow position: chr9:58979431-58979660 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 9-254
Cow position: chr9:16182453-16182221 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 9-255
Cow position: chr9:55118116-55118349 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 236, 50

Conread position: 9-274
Cow position: chr9:36066939-36067195 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 23

Conread position: 9-277
Cow position: chr9:55287858-55287600 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 30

Conread position: 9-290
Cow position: chr9:30664746-30664473 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 9-295
Cow position: chr9:26390802-26391075 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 14-216
Cow position: chr9:62724572-62724777 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 112, 139

Conread position: 14-275
Cow position: chr9:1984485-1984231 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 17

Conread position: 14-298
Cow position: chr9:42497860-42498143 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 14-318
Cow position: chr9:35904706-35904415 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 24

Conread position: 15-296
Cow position: chr9:42998431-42998150 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 111

Conread position: 16-273
Cow position: chr9:31588062-31587808 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 110

Conread position: 16-311
Cow position: chr9:54681548-54681830 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 17

Conread position: 16-323
Cow position: chr9:43871017-43871308 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 8

Conread position: 17-257
Cow position: chr9:41789326-41789551 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 228, 15

Conread position: 19-290
Cow position: chr9:36623405-36623146 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 56

Conread position: 21-290
Cow position: chr9:16218603-16218337 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 18

Conread position: 21-298
Cow position: chr9:31346995-31347267 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 22-265
Cow position: chr9:37069529-37069288 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 107

Conread position: 25-266
Cow position: chr9:14853403-14853172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 194, 75

Conread position: 25-298
Cow position: chr9:5319680-5319943 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 63

Conread position: 25-298
Cow position: chr9:11830057-11830322 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 25-318
Cow position: chr9:41416400-41416684 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 19

Conread position: 28-296
Cow position: chr9:54997980-54997713 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 28-298
Cow position: chr9:7409827-7410096 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 143

Conread position: 28-298
Cow position: chr9:31124880-31124609 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 171, 184

Conread position: 34-301
Cow position: chr9:14974878-14974609 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 38-249
Cow position: chr9:11068412-11068205 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 62

Conread position: 39-293
Cow position: chr9:33681743-33681987 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 72

Conread position: 41-160
Cow position: chr9:40215304-40215422 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 41-207
Cow position: chr9:1973004-1973164 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 41-247
Cow position: chr9:28391972-28391768 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 10

Conread position: 41-257
Cow position: chr9:41995772-41995987 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 79

Conread position: 41-273
Cow position: chr9:5399790-5400004 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 41-274
Cow position: chr9:41513686-41513909 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 204, 58

Conread position: 41-276
Cow position: chr9:64559822-64559597 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 203, 87

Conread position: 41-281
Cow position: chr9:40542183-40542410 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 202, 20

Conread position: 41-285
Cow position: chr9:11313449-11313204 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 193, 87

Conread position: 41-290
Cow position: chr9:48343664-48343907 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 41-298
Cow position: chr9:1520675-1520415 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 41-298
Cow position: chr9:9461593-9461343 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 86

Conread position: 41-298
Cow position: chr9:9490855-9491102 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 41-301
Cow position: chr9:4646266-4646017 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 88

Conread position: 41-314
Cow position: chr9:29840947-29841217 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 111

Conread position: 42-178
Cow position: chr9:1879444-1879573 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 42-227
Cow position: chr9:3186191-3186385 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 42-238
Cow position: chr9:31814313-31814125 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 21

Conread position: 42-238
Cow position: chr9:38614898-38614713 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 42-247
Cow position: chr9:38846280-38846087 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 42-252
Cow position: chr9:29578308-29578511 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 94

Conread position: 42-274
Cow position: chr9:17634770-17634541 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 46

Conread position: 42-277
Cow position: chr9:41781960-41782188 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 203, 68

Conread position: 42-280
Cow position: chr9:49764719-49764952 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 79

Conread position: 42-281
Cow position: chr9:15215623-15215384 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 113

Conread position: 42-290
Cow position: chr9:5245924-5246154 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 48

Conread position: 42-297
Cow position: chr9:49983035-49982784 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 9

Conread position: 42-298
Cow position: chr9:20738765-20739017 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 110

Conread position: 42-298
Cow position: chr9:38961371-38961123 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 42-298
Cow position: chr9:39152616-39152373 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 61

Conread position: 42-298
Cow position: chr9:52505246-52504990 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 42-298
Cow position: chr9:55075071-55074821 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 127

Conread position: 42-337
Cow position: chr9:9199718-9199429 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 70

Conread position: 43-204
Cow position: chr9:6118084-6117928 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 20

Conread position: 43-219
Cow position: chr9:52619710-52619886 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 47

Conread position: 43-258
Cow position: chr9:52001069-52001281 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 78, 122

Conread position: 43-259
Cow position: chr9:41412246-41412036 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 197, 8

Conread position: 43-280
Cow position: chr9:30138195-30138423 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 227, 18

Conread position: 43-280
Cow position: chr9:58673803-58674037 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 45

Conread position: 43-281
Cow position: chr9:27052273-27052036 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 202, 59

Conread position: 43-281
Cow position: chr9:30189161-30189394 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 43-281
Cow position: chr9:55084233-55084000 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 70

Conread position: 43-284
Cow position: chr9:15983018-15982778 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 18

Conread position: 43-290
Cow position: chr9:41679810-41680042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 227, 67

Conread position: 43-298
Cow position: chr9:3932026-3932279 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 84

Conread position: 43-298
Cow position: chr9:24726612-24726364 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 8

Conread position: 43-301
Cow position: chr9:9723819-9723566 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 78

Conread position: 43-341
Cow position: chr9:8997614-8997915 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 44-251
Cow position: chr9:34919198-34918999 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 83

Conread position: 44-298
Cow position: chr9:1855332-1855593 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 21

Conread position: 44-298
Cow position: chr9:21030373-21030631 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 45-199
Cow position: chr9:51011479-51011326 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 45-207
Cow position: chr9:43048562-43048404 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 45-217
Cow position: chr9:43623324-43623492 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 45-262
Cow position: chr9:23541341-23541141 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 45-266
Cow position: chr9:9823439-9823237 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 80

Conread position: 45-278
Cow position: chr9:5836221-5836458 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 99

Conread position: 45-287
Cow position: chr9:45171100-45170866 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 197, 80

Conread position: 45-294
Cow position: chr9:50080980-50080736 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 83

Conread position: 45-295
Cow position: chr9:44915020-44914787 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 45-298
Cow position: chr9:5393115-5393364 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 45-298
Cow position: chr9:42585564-42585312 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 87

Conread position: 45-298
Cow position: chr9:57951257-57951016 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 13

Conread position: 45-303
Cow position: chr9:11299624-11299377 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 200, 80

Conread position: 46-220
Cow position: chr9:15225231-15225055 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 114

Conread position: 46-243
Cow position: chr9:38875509-38875316 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 46-296
Cow position: chr9:28983252-28983496 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 199, 53

Conread position: 46-299
Cow position: chr9:20989388-20989140 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 47-207
Cow position: chr9:42264275-42264443 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 47-255
Cow position: chr9:23042845-23043046 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 57

Conread position: 47-290
Cow position: chr9:10010870-10011108 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 197, 122

Conread position: 47-298
Cow position: chr9:10308940-10308693 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 79

Conread position: 47-298
Cow position: chr9:44467282-44467035 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 14

Conread position: 48-265
Cow position: chr9:1712405-1712207 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 48-279
Cow position: chr9:33940674-33940902 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 197, 129

Conread position: 50-170
Cow position: chr9:62151175-62151290 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 50-181
Cow position: chr9:40543252-40543122 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 50-259
Cow position: chr9:4128712-4128508 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 194, 68

Conread position: 50-282
Cow position: chr9:50076129-50076363 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 50-298
Cow position: chr9:34697234-34696982 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 125

Conread position: 50-298
Cow position: chr9:56252969-56253215 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 220, 52

Conread position: 50-300
Cow position: chr9:31077609-31077362 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 117

Conread position: 50-315
Cow position: chr9:32266325-32266066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 144

Conread position: 51-298
Cow position: chr9:5227098-5226851 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-244
Cow position: chr9:28735553-28735738 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 185, 58

Conread position: 52-251
Cow position: chr9:43207306-43207112 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 193, 149

Conread position: 53-182
Cow position: chr9:37677959-37678088 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 47

Conread position: 53-293
Cow position: chr9:20681331-20681097 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 192, 110

Conread position: 54-195
Cow position: chr9:4512564-4512701 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 0

Conread position: 54-265
Cow position: chr9:47472766-47472977 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 191, 119

Conread position: 54-303
Cow position: chr9:19539165-19539417 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 56-307
Cow position: chr9:20318498-20318259 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 234, 10

Conread position: 57-229
Cow position: chr9:49709916-49710088 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 69

Conread position: 57-230
Cow position: chr9:52131096-52131263 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 116

Conread position: 59-266
Cow position: chr9:10877791-10877584 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 103

Conread position: 62-246
Cow position: chr9:3782443-3782624 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 62-337
Cow position: chr9:10666942-10666673 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 41

Conread position: 74-290
Cow position: chr9:31662559-31662775 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 77-298
Cow position: chr9:5268648-5268870 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 78-296
Cow position: chr9:1350347-1350134 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 80-298
Cow position: chr9:975107-975337 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 45

Conread position: 87-298
Cow position: chr9:37510121-37510331 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 124

Conread position: 89-308
Cow position: chr9:18140186-18139971 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 91-298
Cow position: chr9:13994296-13994502 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 76

Conread position: 93-302
Cow position: chr9:20237895-20237689 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 134, 79

Conread position: 104-298
Cow position: chr9:8418256-8418062 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 141, 115

Conread position: 104-298
Cow position: chr9:25969468-25969660 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 141, 75

Show alignments to all cow chromosomes.