Cow genome map

Conread name: Pig1-70J06

Conread position: 91-206
Cow position: chr12:29691228-29691117 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 253-554
Cow position: chr12:19869012-19869316 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 146

Conread position: 257-552
Cow position: chr12:27563833-27563539 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 189

Conread position: 257-558
Cow position: chr12:18233353-18233049 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 146

Conread position: 257-561
Cow position: chr12:44766632-44766937 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 131

Conread position: 258-519
Cow position: chr12:26203414-26203673 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 87

Conread position: 258-556
Cow position: chr12:27808928-27808621 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 124

Conread position: 258-558
Cow position: chr12:10461551-10461854 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 205

Conread position: 258-561
Cow position: chr12:17716624-17716934 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 186

Conread position: 259-554
Cow position: chr12:47800266-47799975 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 127

Conread position: 259-558
Cow position: chr12:5146381-5146677 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 127

Conread position: 275-518
Cow position: chr12:4657008-4656764 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 68, 88

Conread position: 276-557
Cow position: chr12:11539606-11539313 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 40

Conread position: 279-521
Cow position: chr12:21497095-21496853 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 215

Conread position: 284-554
Cow position: chr12:39486006-39486280 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 159, 10

Conread position: 285-557
Cow position: chr12:19040044-19039761 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 204

Conread position: 286-515
Cow position: chr12:18011012-18011240 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 7

Conread position: 286-517
Cow position: chr12:38678266-38678506 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 286-519
Cow position: chr12:3160642-3160873 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 88

Conread position: 286-520
Cow position: chr12:38010480-38010238 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 174

Conread position: 286-522
Cow position: chr12:7206029-7205792 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 7

Conread position: 286-522
Cow position: chr12:15089065-15089307 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 92

Conread position: 286-522
Cow position: chr12:38774817-38775062 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 7

Conread position: 286-527
Cow position: chr12:38111305-38111546 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 7

Conread position: 286-536
Cow position: chr12:23446006-23446253 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 113

Conread position: 286-553
Cow position: chr12:4593669-4593950 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 96

Conread position: 286-553
Cow position: chr12:15530620-15530904 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 77

Conread position: 286-554
Cow position: chr12:19691664-19691387 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 105

Conread position: 286-554
Cow position: chr12:27055180-27055457 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 186

Conread position: 286-554
Cow position: chr12:30170236-30170515 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 286-555
Cow position: chr12:747818-748090 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 62, 94

Conread position: 286-555
Cow position: chr12:36118547-36118822 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 7

Conread position: 286-556
Cow position: chr12:1223755-1223496 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 77

Conread position: 286-556
Cow position: chr12:2711062-2711341 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 96

Conread position: 286-556
Cow position: chr12:4008706-4008428 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 18

Conread position: 286-557
Cow position: chr12:2286154-2286434 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 117

Conread position: 286-557
Cow position: chr12:3196827-3197105 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 206

Conread position: 286-557
Cow position: chr12:7977627-7977892 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 83

Conread position: 286-557
Cow position: chr12:29969153-29969430 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 108

Conread position: 286-557
Cow position: chr12:42602662-42602387 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 149

Conread position: 286-558
Cow position: chr12:8487754-8487478 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 7

Conread position: 286-558
Cow position: chr12:19865817-19866087 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 7

Conread position: 286-558
Cow position: chr12:40428744-40428471 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 101

Conread position: 286-560
Cow position: chr12:36501372-36501097 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 18

Conread position: 287-511
Cow position: chr12:1883932-1883704 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 287-522
Cow position: chr12:21212609-21212847 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 287-554
Cow position: chr12:6489398-6489137 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 98

Conread position: 287-554
Cow position: chr12:18421351-18421076 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 287-554
Cow position: chr12:34673754-34673493 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 191

Conread position: 287-557
Cow position: chr12:37770446-37770726 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 112

Conread position: 287-560
Cow position: chr12:25312802-25312519 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 288-557
Cow position: chr12:40158660-40158389 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 55

Conread position: 293-559
Cow position: chr12:26777571-26777304 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 227

Conread position: 305-556
Cow position: chr12:25364988-25364731 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 149

Conread position: 320-557
Cow position: chr12:32987305-32987540 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 60

Conread position: 349-558
Cow position: chr12:15938626-15938423 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 96, 55

Conread position: 349-560
Cow position: chr12:47803793-47804008 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 392-554
Cow position: chr12:37270583-37270747 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 406-558
Cow position: chr12:44905332-44905495 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 422-556
Cow position: chr12:16851298-16851160 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 429-560
Cow position: chr12:5797826-5797693 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 117

Show alignments to all cow chromosomes.