Cow genome map

Conread name: Pig1-70J06

Conread position: 252-502
Cow position: chr13:34190805-34191059 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 255-556
Cow position: chr13:24285957-24285657 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 86

Conread position: 257-522
Cow position: chr13:11316144-11316422 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 78

Conread position: 257-551
Cow position: chr13:185907-185612 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 143

Conread position: 257-554
Cow position: chr13:10928595-10928893 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 24

Conread position: 257-554
Cow position: chr13:14716933-14717237 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 31

Conread position: 257-555
Cow position: chr13:41607972-41608268 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 129

Conread position: 257-556
Cow position: chr13:10755316-10755013 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 142

Conread position: 257-556
Cow position: chr13:12233055-12233360 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 129

Conread position: 257-556
Cow position: chr13:21402393-21402701 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 257-556
Cow position: chr13:26079848-26079550 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 43

Conread position: 258-558
Cow position: chr13:25882824-25883130 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 127

Conread position: 259-519
Cow position: chr13:37558702-37558441 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 179

Conread position: 260-556
Cow position: chr13:38897857-38898153 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 90, 125

Conread position: 260-557
Cow position: chr13:9803457-9803168 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 140

Conread position: 270-556
Cow position: chr13:1767158-1766869 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 167

Conread position: 275-471
Cow position: chr13:54864682-54864875 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 11

Conread position: 275-517
Cow position: chr13:1232035-1231790 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 125

Conread position: 277-558
Cow position: chr13:51856256-51856544 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 168, 0

Conread position: 281-555
Cow position: chr13:7010847-7010564 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 285-537
Cow position: chr13:57493810-57494066 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 285-553
Cow position: chr13:18215804-18215528 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 115

Conread position: 285-553
Cow position: chr13:47007365-47007629 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 114

Conread position: 285-554
Cow position: chr13:971522-971793 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 232

Conread position: 285-554
Cow position: chr13:20820464-20820736 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 232

Conread position: 285-554
Cow position: chr13:34263008-34263269 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 78

Conread position: 285-554
Cow position: chr13:34282054-34281776 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 89

Conread position: 285-557
Cow position: chr13:25453544-25453263 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 286-510
Cow position: chr13:42085181-42084957 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 100

Conread position: 286-511
Cow position: chr13:9900677-9900447 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 286-517
Cow position: chr13:24695736-24695506 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 47

Conread position: 286-518
Cow position: chr13:21135359-21135593 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 165

Conread position: 286-522
Cow position: chr13:6054749-6054511 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 286-522
Cow position: chr13:26073302-26073069 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 99

Conread position: 286-522
Cow position: chr13:50690020-50690258 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 8

Conread position: 286-528
Cow position: chr13:62169171-62169412 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 99

Conread position: 286-538
Cow position: chr13:33347439-33347179 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 90

Conread position: 286-554
Cow position: chr13:31814238-31813971 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 103

Conread position: 286-554
Cow position: chr13:43762544-43762269 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 82

Conread position: 286-554
Cow position: chr13:47313269-47313019 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 286-555
Cow position: chr13:36771049-36771320 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 113

Conread position: 286-556
Cow position: chr13:34728467-34728739 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 114

Conread position: 286-556
Cow position: chr13:43802863-43803134 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 65

Conread position: 286-557
Cow position: chr13:1170839-1170566 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 7

Conread position: 286-557
Cow position: chr13:20377969-20378238 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 84

Conread position: 286-557
Cow position: chr13:34941284-34941556 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 113

Conread position: 286-557
Cow position: chr13:44278725-44278449 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 83

Conread position: 286-557
Cow position: chr13:46182146-46181889 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 82

Conread position: 286-557
Cow position: chr13:47215881-47216159 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 8

Conread position: 286-558
Cow position: chr13:60436505-60436787 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 286-559
Cow position: chr13:6606647-6606927 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 286-560
Cow position: chr13:22774927-22775212 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 251

Conread position: 286-561
Cow position: chr13:51941102-51940828 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 113

Conread position: 287-522
Cow position: chr13:9974694-9974934 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 80

Conread position: 287-554
Cow position: chr13:38283612-38283886 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 112

Conread position: 287-556
Cow position: chr13:6945745-6945466 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 63, 112

Conread position: 287-557
Cow position: chr13:11834111-11834377 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 178

Conread position: 288-557
Cow position: chr13:23444440-23444716 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 61, 103

Conread position: 290-554
Cow position: chr13:24767781-24767485 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 292-554
Cow position: chr13:21235325-21235587 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 42

Conread position: 293-513
Cow position: chr13:12875618-12875839 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 192

Conread position: 293-561
Cow position: chr13:25434763-25435028 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 219

Conread position: 294-554
Cow position: chr13:19426333-19426596 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 296-558
Cow position: chr13:32717510-32717779 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 10

Conread position: 297-557
Cow position: chr13:16015177-16014912 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 220

Conread position: 300-517
Cow position: chr13:1042597-1042818 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 300-554
Cow position: chr13:33876022-33875764 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 301-558
Cow position: chr13:41360107-41359845 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 86

Conread position: 302-554
Cow position: chr13:21175966-21176222 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 144

Conread position: 335-558
Cow position: chr13:4208494-4208722 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 60

Conread position: 345-556
Cow position: chr13:55843798-55843581 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 368-557
Cow position: chr13:29671152-29671342 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 155, 17

Conread position: 376-556
Cow position: chr13:14227209-14227027 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 392-559
Cow position: chr13:52879676-52879503 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 405-556
Cow position: chr13:6759537-6759695 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 62

Conread position: 409-553
Cow position: chr13:44323152-44323001 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 410-555
Cow position: chr13:24715485-24715343 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 414-556
Cow position: chr13:24539739-24539590 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 418-558
Cow position: chr13:7076496-7076353 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.