Cow genome map

Conread name: Pig1-70J06

Conread position: 253-556
Cow position: chr19:29627799-29627503 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 115

Conread position: 254-558
Cow position: chr19:39661970-39661662 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 22

Conread position: 257-501
Cow position: chr19:39623211-39622966 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 130

Conread position: 257-518
Cow position: chr19:9293835-9294105 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 257-522
Cow position: chr19:30435783-30436061 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 186

Conread position: 257-556
Cow position: chr19:2821149-2821458 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 257-556
Cow position: chr19:3177684-3177976 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 113

Conread position: 257-556
Cow position: chr19:33280949-33281241 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 128

Conread position: 257-556
Cow position: chr19:48409088-48409387 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 180

Conread position: 258-556
Cow position: chr19:2771439-2771137 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 232

Conread position: 259-528
Cow position: chr19:33674776-33674499 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 104

Conread position: 259-544
Cow position: chr19:46873120-46872818 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 26, 273

Conread position: 259-556
Cow position: chr19:48478539-48478854 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 9

Conread position: 259-557
Cow position: chr19:37654388-37654700 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 264-556
Cow position: chr19:3124474-3124174 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 10

Conread position: 269-561
Cow position: chr19:47773320-47773038 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 75

Conread position: 273-556
Cow position: chr19:39876927-39876644 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 126

Conread position: 275-483
Cow position: chr19:55011492-55011704 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 283-561
Cow position: chr19:5656514-5656224 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 284-556
Cow position: chr19:36977316-36977038 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 154

Conread position: 285-482
Cow position: chr19:36189814-36190009 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 114

Conread position: 285-507
Cow position: chr19:34287411-34287638 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 174

Conread position: 285-517
Cow position: chr19:37647240-37647004 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 78

Conread position: 285-554
Cow position: chr19:15068393-15068128 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 195

Conread position: 285-554
Cow position: chr19:18786724-18786446 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 78

Conread position: 285-554
Cow position: chr19:20671304-20671022 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 96

Conread position: 285-554
Cow position: chr19:35018645-35018370 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 209

Conread position: 285-554
Cow position: chr19:38392399-38392676 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 152, 66

Conread position: 285-554
Cow position: chr19:38755901-38756170 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 46

Conread position: 285-557
Cow position: chr19:35380945-35380672 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 69, 106

Conread position: 286-517
Cow position: chr19:1901402-1901166 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 286-519
Cow position: chr19:35539907-35540143 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 30

Conread position: 286-522
Cow position: chr19:44488974-44489202 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 45

Conread position: 286-554
Cow position: chr19:12697928-12698198 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 102

Conread position: 286-554
Cow position: chr19:23222245-23222510 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 84

Conread position: 286-554
Cow position: chr19:33033851-33033567 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 286-554
Cow position: chr19:36721936-36722198 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 91

Conread position: 286-554
Cow position: chr19:39077929-39078199 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 235

Conread position: 286-554
Cow position: chr19:56382750-56383015 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 67, 99

Conread position: 286-555
Cow position: chr19:4446015-4445745 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 7

Conread position: 286-555
Cow position: chr19:33932542-33932273 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 212

Conread position: 286-556
Cow position: chr19:4340308-4340032 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 286-556
Cow position: chr19:30746003-30746280 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 84

Conread position: 286-556
Cow position: chr19:36125189-36125464 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 149

Conread position: 286-556
Cow position: chr19:39697674-39697947 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 286-556
Cow position: chr19:43431717-43431446 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 99

Conread position: 286-556
Cow position: chr19:52305318-52305028 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 64, 209

Conread position: 286-556
Cow position: chr19:54984677-54984945 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 6

Conread position: 286-557
Cow position: chr19:6688404-6688124 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 99

Conread position: 286-557
Cow position: chr19:10948012-10947729 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 286-557
Cow position: chr19:19804931-19804655 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 286-557
Cow position: chr19:23908539-23908261 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 145

Conread position: 286-557
Cow position: chr19:33306702-33306977 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 8

Conread position: 286-558
Cow position: chr19:8127918-8128196 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 94

Conread position: 286-558
Cow position: chr19:20699687-20699971 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 286-558
Cow position: chr19:25054070-25053797 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 82

Conread position: 286-558
Cow position: chr19:46918443-46918724 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 58

Conread position: 286-559
Cow position: chr19:11395360-11395079 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 7

Conread position: 286-561
Cow position: chr19:8839199-8839485 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 286-561
Cow position: chr19:21285497-21285197 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 286-561
Cow position: chr19:42205532-42205815 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 32

Conread position: 287-484
Cow position: chr19:11488000-11487803 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 156, 58

Conread position: 287-515
Cow position: chr19:42609316-42609546 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 7

Conread position: 287-517
Cow position: chr19:25955237-25955007 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 98

Conread position: 287-522
Cow position: chr19:19500759-19500523 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 287-522
Cow position: chr19:20612136-20612374 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 287-522
Cow position: chr19:21348747-21348985 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 287-554
Cow position: chr19:42240687-42240417 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 81

Conread position: 287-555
Cow position: chr19:1582285-1582011 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 176
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 174

Conread position: 288-517
Cow position: chr19:46822046-46822274 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 103

Conread position: 288-554
Cow position: chr19:7065812-7066061 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 50

Conread position: 288-554
Cow position: chr19:44144302-44144038 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 97

Conread position: 288-556
Cow position: chr19:42647457-42647181 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 80

Conread position: 288-557
Cow position: chr19:55725093-55724824 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 79

Conread position: 288-561
Cow position: chr19:47109635-47109921 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 168

Conread position: 292-554
Cow position: chr19:35621975-35622233 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 68

Conread position: 293-554
Cow position: chr19:16566767-16567032 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 106

Conread position: 293-554
Cow position: chr19:34956088-34955819 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 6

Conread position: 293-556
Cow position: chr19:15437717-15437979 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 234

Conread position: 294-561
Cow position: chr19:47727959-47727690 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 157

Conread position: 360-556
Cow position: chr19:5648976-5648776 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 182

Conread position: 376-554
Cow position: chr19:27612475-27612296 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 165

Conread position: 383-556
Cow position: chr19:7492134-7492311 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 109

Conread position: 406-557
Cow position: chr19:36461804-36461650 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 406-557
Cow position: chr19:53645692-53645538 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 413-558
Cow position: chr19:53372166-53372018 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 10

Show alignments to all cow chromosomes.