Cow genome map
| Conread name: | Pig1-70J06 |
| Conread position: | 250-556 |
| Cow position: | chr20:12155485-12155175 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 257-471 |
| Cow position: | chr20:7527733-7527518 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 93, 180 |
| Conread position: | 257-484 |
| Cow position: | chr20:9267496-9267266 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 137 |
| Conread position: | 257-499 |
| Cow position: | chr20:19340442-19340197 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 257-554 |
| Cow position: | chr20:13048792-13048486 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 257-554 |
| Cow position: | chr20:18490818-18491113 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 118 |
| Conread position: | 257-556 |
| Cow position: | chr20:18413484-18413788 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 257-556 |
| Cow position: | chr20:23164247-23163941 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 296 |
| Conread position: | 257-556 |
| Cow position: | chr20:38028369-38028073 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 257-557 |
| Cow position: | chr20:4895271-4894958 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 257-557 |
| Cow position: | chr20:23679522-23679217 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 257-558 |
| Cow position: | chr20:13817476-13817778 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 257-560 |
| Cow position: | chr20:40423464-40423156 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 257-561 |
| Cow position: | chr20:27565646-27565958 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 259-556 |
| Cow position: | chr20:19352134-19351834 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 275-557 |
| Cow position: | chr20:13789954-13790240 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 276-554 |
| Cow position: | chr20:34375868-34376149 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 284-554 |
| Cow position: | chr20:10235505-10235784 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 284-557 |
| Cow position: | chr20:3659041-3658769 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 285-522 |
| Cow position: | chr20:32866692-32866452 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 285-552 |
| Cow position: | chr20:7756973-7756703 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 285-552 |
| Cow position: | chr20:22445983-22445709 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 285-553 |
| Cow position: | chr20:20202870-20203143 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 285-554 |
| Cow position: | chr20:11550020-11550294 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 285-554 |
| Cow position: | chr20:14806539-14806814 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 285-554 |
| Cow position: | chr20:18321140-18320863 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 285-554 |
| Cow position: | chr20:19363707-19363435 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 285-554 |
| Cow position: | chr20:24069469-24069732 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 114 |
| Conread position: | 285-554 |
| Cow position: | chr20:32847007-32847284 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 286-517 |
| Cow position: | chr20:7806906-7806673 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 286-517 |
| Cow position: | chr20:35889110-35888882 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 286-522 |
| Cow position: | chr20:6238992-6238753 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 286-522 |
| Cow position: | chr20:10859709-10859471 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 286-537 |
| Cow position: | chr20:26316158-26315904 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 286-537 |
| Cow position: | chr20:34001734-34001488 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 286-552 |
| Cow position: | chr20:9473957-9473694 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 286-553 |
| Cow position: | chr20:3501949-3502223 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 257 |
| Conread position: | 286-554 |
| Cow position: | chr20:3891705-3891969 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 286-554 |
| Cow position: | chr20:10913678-10913403 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 286-554 |
| Cow position: | chr20:18100074-18100345 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 178 |
| Conread position: | 286-555 |
| Cow position: | chr20:4756167-4755893 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 94 |
| Conread position: | 286-556 |
| Cow position: | chr20:4621686-4621415 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 286-556 |
| Cow position: | chr20:7110463-7110185 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 286-556 |
| Cow position: | chr20:26076743-26077014 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 286-557 |
| Cow position: | chr20:33531965-33532238 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 64, 95 |
| Conread position: | 286-558 |
| Cow position: | chr20:12442035-12441756 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 121, 112 |
| Conread position: | 286-558 |
| Cow position: | chr20:36374277-36373998 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 185 |
| Conread position: | 286-560 |
| Cow position: | chr20:13877054-13876771 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 67, 263 |
| Conread position: | 286-560 |
| Cow position: | chr20:32667645-32667928 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 108 |
| Conread position: | 286-561 |
| Cow position: | chr20:6570987-6571265 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 64, 220 |
| Conread position: | 286-561 |
| Cow position: | chr20:19313409-19313126 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 287-522 |
| Cow position: | chr20:20236448-20236683 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 108 |
| Conread position: | 297-555 |
| Cow position: | chr20:37190184-37190447 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 299-554 |
| Cow position: | chr20:9412164-9412418 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 299-554 |
| Cow position: | chr20:31740544-31740292 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 299-556 |
| Cow position: | chr20:15577223-15576958 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 312-558 |
| Cow position: | chr20:17251392-17251641 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 319-561 |
| Cow position: | chr20:32583818-32584066 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 46 |
Show alignments to all cow chromosomes.