Cow genome map
| Conread name: | Pig1-70J06 |
| Conread position: | 252-554 |
| Cow position: | chr23:16610231-16609921 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 257-552 |
| Cow position: | chr23:11010085-11009790 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 257-555 |
| Cow position: | chr23:37190992-37190690 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 257-556 |
| Cow position: | chr23:1924249-1923947 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 189 |
| Conread position: | 257-557 |
| Cow position: | chr23:30656572-30656285 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 257-558 |
| Cow position: | chr23:9641833-9641525 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 257-561 |
| Cow position: | chr23:24504833-24505143 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 205 |
| Conread position: | 258-513 |
| Cow position: | chr23:497014-496756 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 247 |
| Conread position: | 258-555 |
| Cow position: | chr23:11434682-11434372 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 265 |
| Conread position: | 258-556 |
| Cow position: | chr23:20586129-20585826 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 229 |
| Conread position: | 258-558 |
| Cow position: | chr23:19002483-19002175 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 21, 137 |
| Conread position: | 259-554 |
| Cow position: | chr23:361325-361028 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 165 |
| Conread position: | 270-555 |
| Cow position: | chr23:2370977-2371263 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 273-557 |
| Cow position: | chr23:40526370-40526079 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 276-557 |
| Cow position: | chr23:14566119-14565826 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 278-555 |
| Cow position: | chr23:19636657-19636372 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 72, 121 |
| Conread position: | 283-517 |
| Cow position: | chr23:35375009-35374786 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 285-522 |
| Cow position: | chr23:1719128-1719374 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 232 |
| Conread position: | 285-522 |
| Cow position: | chr23:26319032-26319270 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 285-553 |
| Cow position: | chr23:1721389-1721098 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 268 |
| Conread position: | 285-554 |
| Cow position: | chr23:1696442-1696712 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 285-554 |
| Cow position: | chr23:7844902-7845180 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 92 |
| Conread position: | 285-554 |
| Cow position: | chr23:8698059-8698334 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 151 |
| Conread position: | 285-554 |
| Cow position: | chr23:9268202-9268480 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 285-554 |
| Cow position: | chr23:14191164-14191440 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 133 |
| Conread position: | 285-554 |
| Cow position: | chr23:26322812-26322545 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 221 |
| Conread position: | 285-560 |
| Cow position: | chr23:20744976-20744700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 267 |
| Conread position: | 286-480 |
| Cow position: | chr23:35941841-35942047 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 286-517 |
| Cow position: | chr23:772265-772497 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 286-517 |
| Cow position: | chr23:7835879-7835651 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 286-519 |
| Cow position: | chr23:16072844-16073080 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 286-522 |
| Cow position: | chr23:25565816-25566056 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 286-524 |
| Cow position: | chr23:25669452-25669215 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 286-550 |
| Cow position: | chr23:9712727-9712998 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 286-552 |
| Cow position: | chr23:18698413-18698143 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 286-553 |
| Cow position: | chr23:1430186-1429908 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 286-554 |
| Cow position: | chr23:344561-344287 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 99 |
| Conread position: | 286-554 |
| Cow position: | chr23:3167856-3168136 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 286-554 |
| Cow position: | chr23:9595215-9594943 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 286-554 |
| Cow position: | chr23:22530792-22530527 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 286-554 |
| Cow position: | chr23:31493498-31493759 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 286-556 |
| Cow position: | chr23:666494-666221 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 286-556 |
| Cow position: | chr23:14839119-14838851 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 286-557 |
| Cow position: | chr23:35926211-35926482 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 286-557 |
| Cow position: | chr23:40777877-40778156 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 286-558 |
| Cow position: | chr23:15710462-15710187 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 286-558 |
| Cow position: | chr23:21336875-21336600 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 230 |
| Conread position: | 286-559 |
| Cow position: | chr23:29441386-29441104 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 286-561 |
| Cow position: | chr23:14739067-14739343 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 287-517 |
| Cow position: | chr23:35070099-35070331 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 287-522 |
| Cow position: | chr23:9517847-9517609 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 287-556 |
| Cow position: | chr23:26003679-26003953 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 287-557 |
| Cow position: | chr23:30663009-30662735 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 287-558 |
| Cow position: | chr23:8959213-8959492 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 9, 165 |
| Conread position: | 287-558 |
| Cow position: | chr23:26741835-26741568 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 288-554 |
| Cow position: | chr23:20001692-20001952 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 297-556 |
| Cow position: | chr23:9294128-9293861 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 299-561 |
| Cow position: | chr23:25408464-25408727 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 30, 142 |
| Conread position: | 301-561 |
| Cow position: | chr23:16058228-16058496 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 335-559 |
| Cow position: | chr23:37065504-37065733 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 353-554 |
| Cow position: | chr23:1905710-1905917 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 406-554 |
| Cow position: | chr23:3918363-3918210 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-556 |
| Cow position: | chr23:35363037-35362884 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.