Cow genome map
| Conread name: | Pig1-70J06 |
| Conread position: | 248-557 |
| Cow position: | chr24:40056163-40055858 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 252-550 |
| Cow position: | chr24:42908143-42907840 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 257-556 |
| Cow position: | chr24:5849849-5849535 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 143 |
| Conread position: | 257-556 |
| Cow position: | chr24:39500721-39500416 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 257-558 |
| Cow position: | chr24:29845703-29845406 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 257-560 |
| Cow position: | chr24:18075697-18076019 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 258-557 |
| Cow position: | chr24:32370352-32370055 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 263-555 |
| Cow position: | chr24:28067330-28067622 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 186 |
| Conread position: | 266-453 |
| Cow position: | chr24:6416245-6416429 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 275-556 |
| Cow position: | chr24:27720172-27719892 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 275-558 |
| Cow position: | chr24:21264931-21264646 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 162 |
| Conread position: | 275-560 |
| Cow position: | chr24:1272293-1271996 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 75, 114 |
| Conread position: | 277-561 |
| Cow position: | chr24:32205217-32204925 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 285-553 |
| Cow position: | chr24:31811774-31812048 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 285-554 |
| Cow position: | chr24:28303763-28303492 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 240 |
| Conread position: | 285-554 |
| Cow position: | chr24:29064056-29063787 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 104 |
| Conread position: | 285-554 |
| Cow position: | chr24:29180488-29180749 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 212 |
| Conread position: | 286-515 |
| Cow position: | chr24:27754284-27754514 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 286-517 |
| Cow position: | chr24:32693294-32693524 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 286-522 |
| Cow position: | chr24:32054259-32054499 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 286-522 |
| Cow position: | chr24:32456016-32456253 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 111 |
| Conread position: | 286-522 |
| Cow position: | chr24:35572075-35572311 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 141 |
| Conread position: | 286-537 |
| Cow position: | chr24:27763390-27763646 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 286-554 |
| Cow position: | chr24:7001480-7001203 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 286-554 |
| Cow position: | chr24:17999460-17999719 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 286-554 |
| Cow position: | chr24:27844932-27844661 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 63, 258 |
| Conread position: | 286-554 |
| Cow position: | chr24:28721468-28721752 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 186 |
| Conread position: | 286-555 |
| Cow position: | chr24:18485412-18485135 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 286-555 |
| Cow position: | chr24:27148995-27149257 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 286-555 |
| Cow position: | chr24:41333289-41333016 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 286-556 |
| Cow position: | chr24:25677621-25677900 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 286-556 |
| Cow position: | chr24:30766462-30766740 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 286-556 |
| Cow position: | chr24:32759197-32758897 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 286-556 |
| Cow position: | chr24:33730453-33730718 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 94 |
| Conread position: | 286-556 |
| Cow position: | chr24:35568776-35569047 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 286-556 |
| Cow position: | chr24:37205285-37205016 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 286-557 |
| Cow position: | chr24:18741982-18741707 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 286-557 |
| Cow position: | chr24:27906016-27906302 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 286-557 |
| Cow position: | chr24:28029116-28028840 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 286-557 |
| Cow position: | chr24:35986124-35985859 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 286-558 |
| Cow position: | chr24:11839769-11840043 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 286-558 |
| Cow position: | chr24:27052902-27052631 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 286-558 |
| Cow position: | chr24:27874195-27874464 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 286-558 |
| Cow position: | chr24:44987785-44987518 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 156, 199 |
| Conread position: | 286-559 |
| Cow position: | chr24:23616284-23616558 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 286-559 |
| Cow position: | chr24:39219254-39218977 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 286-560 |
| Cow position: | chr24:6341756-6342041 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 286-561 |
| Cow position: | chr24:3631105-3631378 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 204 |
| Conread position: | 287-519 |
| Cow position: | chr24:814673-814441 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 287-522 |
| Cow position: | chr24:6067427-6067192 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 98 |
| Conread position: | 287-554 |
| Cow position: | chr24:20862373-20862097 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 234 |
| Conread position: | 287-555 |
| Cow position: | chr24:18025376-18025106 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 287-557 |
| Cow position: | chr24:15508946-15508674 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 288-554 |
| Cow position: | chr24:2402785-2402513 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 288-559 |
| Cow position: | chr24:42581241-42580964 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 292-556 |
| Cow position: | chr24:2674926-2675185 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 295-561 |
| Cow position: | chr24:6161248-6160979 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 93 |
| Conread position: | 339-552 |
| Cow position: | chr24:29027693-29027903 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 361-556 |
| Cow position: | chr24:39258824-39259028 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 383-558 |
| Cow position: | chr24:8886602-8886776 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 392-561 |
| Cow position: | chr24:6508068-6507896 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.