Cow genome map
| Conread name: | Pig1-70J06 |
| Conread position: | 250-557 |
| Cow position: | chr27:30783712-30784027 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 252-553 |
| Cow position: | chr27:28106758-28107062 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 257-518 |
| Cow position: | chr27:12191075-12191340 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 257-554 |
| Cow position: | chr27:20510566-20510265 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 257-556 |
| Cow position: | chr27:9090427-9090734 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 257-556 |
| Cow position: | chr27:20765578-20765892 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 257-556 |
| Cow position: | chr27:25471533-25471205 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 257-557 |
| Cow position: | chr27:6523428-6523111 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 257-557 |
| Cow position: | chr27:30583112-30582808 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 257-561 |
| Cow position: | chr27:8430053-8430378 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 259-556 |
| Cow position: | chr27:30702717-30703006 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 275-554 |
| Cow position: | chr27:12282498-12282795 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 277-556 |
| Cow position: | chr27:30561269-30560982 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 278-544 |
| Cow position: | chr27:22394529-22394249 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 284-554 |
| Cow position: | chr27:19718265-19717993 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 285-522 |
| Cow position: | chr27:23511464-23511227 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 285-554 |
| Cow position: | chr27:815710-815437 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 68, 114 |
| Conread position: | 285-554 |
| Cow position: | chr27:4673360-4673090 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 286-519 |
| Cow position: | chr27:17645853-17646092 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 286-519 |
| Cow position: | chr27:23595614-23595381 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 286-522 |
| Cow position: | chr27:2298756-2298517 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 286-522 |
| Cow position: | chr27:16984131-16983894 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 203 |
| Conread position: | 286-522 |
| Cow position: | chr27:20828363-20828601 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 286-522 |
| Cow position: | chr27:27521660-27521899 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 286-551 |
| Cow position: | chr27:1768290-1768553 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 286-553 |
| Cow position: | chr27:22418423-22418695 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 286-554 |
| Cow position: | chr27:14670037-14670313 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 286-554 |
| Cow position: | chr27:15319794-15319518 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 286-556 |
| Cow position: | chr27:25970853-25970577 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 169 |
| Conread position: | 286-556 |
| Cow position: | chr27:27141936-27141663 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 286-557 |
| Cow position: | chr27:5990224-5989950 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 286-557 |
| Cow position: | chr27:10582707-10582433 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 286-557 |
| Cow position: | chr27:11434987-11435253 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 286-557 |
| Cow position: | chr27:25809179-25809447 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 286-558 |
| Cow position: | chr27:11413059-11412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 286-558 |
| Cow position: | chr27:15866565-15866291 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 137 |
| Conread position: | 286-558 |
| Cow position: | chr27:23632940-23632665 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 111 |
| Conread position: | 286-558 |
| Cow position: | chr27:24227449-24227725 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 286-559 |
| Cow position: | chr27:15867731-15867464 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 149 |
| Conread position: | 286-559 |
| Cow position: | chr27:21393163-21393435 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 287-507 |
| Cow position: | chr27:21283417-21283198 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 288-554 |
| Cow position: | chr27:16620330-16620059 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 55, 101 |
| Conread position: | 288-558 |
| Cow position: | chr27:12277938-12278200 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 293-557 |
| Cow position: | chr27:23070026-23070293 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 294-554 |
| Cow position: | chr27:25411179-25411446 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 299-554 |
| Cow position: | chr27:6074247-6073992 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 383-560 |
| Cow position: | chr27:29019504-29019688 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 387-558 |
| Cow position: | chr27:795024-794851 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 394-555 |
| Cow position: | chr27:2592776-2592619 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 406-555 |
| Cow position: | chr27:25783825-25783674 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 406-559 |
| Cow position: | chr27:28921673-28921832 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 433-558 |
| Cow position: | chr27:6037318-6037192 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.