Cow genome map

Conread name: Pig1-70J06

Conread position: 241-521
Cow position: chr6:48946757-48946479 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 16

Conread position: 248-522
Cow position: chr6:4164771-4164508 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 11

Conread position: 252-559
Cow position: chr6:61575215-61575538 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 140

Conread position: 253-552
Cow position: chr6:34075650-34075941 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 30

Conread position: 253-555
Cow position: chr6:55608189-55607887 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 112

Conread position: 257-519
Cow position: chr6:64895710-64895971 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 96

Conread position: 257-552
Cow position: chr6:11789024-11789324 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 291

Conread position: 257-552
Cow position: chr6:39358707-39358420 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 24

Conread position: 257-554
Cow position: chr6:19427072-19427378 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 143

Conread position: 257-554
Cow position: chr6:29077354-29077654 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 29

Conread position: 257-554
Cow position: chr6:33852161-33851866 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 143

Conread position: 257-554
Cow position: chr6:59507969-59508284 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 181

Conread position: 257-555
Cow position: chr6:47026105-47026407 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 48

Conread position: 257-556
Cow position: chr6:12387697-12387397 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 93, 121

Conread position: 257-557
Cow position: chr6:31688758-31688458 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 122

Conread position: 257-558
Cow position: chr6:24781941-24781630 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 257-560
Cow position: chr6:50422462-50422145 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 247

Conread position: 257-561
Cow position: chr6:6944051-6943746 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 82

Conread position: 257-561
Cow position: chr6:31636066-31635757 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 185

Conread position: 257-561
Cow position: chr6:36652052-36652352 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 114

Conread position: 258-557
Cow position: chr6:10612486-10612786 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 120

Conread position: 259-512
Cow position: chr6:50527283-50527536 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 177

Conread position: 259-561
Cow position: chr6:50800787-50800479 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 286

Conread position: 259-561
Cow position: chr6:58594487-58594172 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 156

Conread position: 267-554
Cow position: chr6:16675459-16675735 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 111

Conread position: 275-556
Cow position: chr6:28343290-28343574 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 148

Conread position: 275-561
Cow position: chr6:28084372-28084079 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 105

Conread position: 276-522
Cow position: chr6:28811353-28811105 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 209

Conread position: 276-556
Cow position: chr6:2640479-2640187 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 173

Conread position: 276-561
Cow position: chr6:16518214-16517926 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 168

Conread position: 280-557
Cow position: chr6:57474026-57474307 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 101

Conread position: 285-524
Cow position: chr6:32287271-32287508 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 177

Conread position: 285-537
Cow position: chr6:1944381-1944632 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 69, 105

Conread position: 285-553
Cow position: chr6:12550919-12551194 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 198

Conread position: 285-553
Cow position: chr6:56842811-56843080 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 114

Conread position: 285-554
Cow position: chr6:8209934-8209666 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 100

Conread position: 285-557
Cow position: chr6:54806874-54807155 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 286-515
Cow position: chr6:68252436-68252668 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 286-522
Cow position: chr6:61443448-61443212 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 64, 99

Conread position: 286-549
Cow position: chr6:16706662-16706922 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 99

Conread position: 286-553
Cow position: chr6:12623124-12623396 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 7

Conread position: 286-554
Cow position: chr6:14958690-14958420 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 52

Conread position: 286-554
Cow position: chr6:23695650-23695919 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 62, 113

Conread position: 286-554
Cow position: chr6:40031845-40032118 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 197

Conread position: 286-554
Cow position: chr6:44372286-44372019 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 77

Conread position: 286-554
Cow position: chr6:60456483-60456756 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 113

Conread position: 286-555
Cow position: chr6:16765740-16765471 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 132

Conread position: 286-555
Cow position: chr6:24327483-24327213 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 165

Conread position: 286-556
Cow position: chr6:4864886-4864621 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 154

Conread position: 286-556
Cow position: chr6:5958363-5958092 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 77

Conread position: 286-556
Cow position: chr6:48169597-48169872 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 213

Conread position: 286-556
Cow position: chr6:48807336-48807069 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 67

Conread position: 286-556
Cow position: chr6:52002022-52002295 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 114

Conread position: 286-556
Cow position: chr6:58073695-58073975 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 286-557
Cow position: chr6:6343080-6343354 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 86

Conread position: 286-557
Cow position: chr6:10253873-10254169 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 67, 18

Conread position: 286-557
Cow position: chr6:12927775-12928046 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 102

Conread position: 286-557
Cow position: chr6:24652528-24652260 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 99

Conread position: 286-557
Cow position: chr6:25358729-25359003 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 113

Conread position: 286-557
Cow position: chr6:44098740-44099014 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 99

Conread position: 286-557
Cow position: chr6:53345448-53345724 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 286-557
Cow position: chr6:54647873-54647594 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 88

Conread position: 286-557
Cow position: chr6:55474902-55475174 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 148

Conread position: 286-558
Cow position: chr6:12844962-12845239 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 204

Conread position: 286-558
Cow position: chr6:13741350-13741624 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 112

Conread position: 286-558
Cow position: chr6:21312102-21311825 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 7

Conread position: 286-558
Cow position: chr6:33302064-33302337 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 7

Conread position: 286-558
Cow position: chr6:41824176-41823893 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 101

Conread position: 286-558
Cow position: chr6:46205671-46205939 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 7

Conread position: 286-558
Cow position: chr6:48468454-48468734 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 58

Conread position: 286-558
Cow position: chr6:55842508-55842230 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 113

Conread position: 286-558
Cow position: chr6:66363592-66363317 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 246

Conread position: 286-560
Cow position: chr6:8318513-8318233 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 71, 67

Conread position: 286-561
Cow position: chr6:16625600-16625879 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 92

Conread position: 287-480
Cow position: chr6:55763043-55763236 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 108

Conread position: 287-515
Cow position: chr6:6068035-6067793 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 287-520
Cow position: chr6:31548776-31548540 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 287-553
Cow position: chr6:18977272-18977551 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 71, 58

Conread position: 287-554
Cow position: chr6:49398964-49398689 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 56, 113

Conread position: 287-557
Cow position: chr6:39088425-39088700 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 288-555
Cow position: chr6:10649364-10649099 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 167

Conread position: 288-560
Cow position: chr6:456835-457116 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 302-556
Cow position: chr6:60152704-60152963 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 93

Conread position: 302-558
Cow position: chr6:10176630-10176372 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 83

Conread position: 317-556
Cow position: chr6:47625275-47625036 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 28

Conread position: 370-558
Cow position: chr6:64436589-64436398 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 19

Conread position: 378-556
Cow position: chr6:20420115-20420301 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 133

Conread position: 379-560
Cow position: chr6:9026262-9026448 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 401-557
Cow position: chr6:52401629-52401786 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 105

Conread position: 414-557
Cow position: chr6:51398582-51398729 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 420-556
Cow position: chr6:35769695-35769555 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 427-555
Cow position: chr6:6098488-6098358 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.