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Cow genome map

           
Conread name:
           
Pig1-75G13
        

               
Conread position:
               
1-141
               

               
Cow position:
               
chr12:22048071-22047926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr12:4512304-4512470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 145
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr12:43474905-43474730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr12:39149902-39150094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr12:14986894-14986704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 84
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr12:43974439-43974236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr12:36261841-36261627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr12:45092587-45092381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr12:6187962-6188180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr12:12233028-12232811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr12:6206481-6206261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr12:5839514-5839737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr12:5554190-5554425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr12:42749590-42749341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr12:4954968-4954728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr12:9130050-9129794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr12:31269305-31269041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr12:18582852-18583106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr12:23939366-23939105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr12:26749803-26750077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr12:14223130-14222852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 189
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr12:18563309-18563019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
114, 281
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr12:24152489-24152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 214
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr12:37008563-37008839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr12:10942441-10942146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr12:16670413-16670124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr12:29674992-29675279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr12:42286594-42286897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr12:9766734-9767019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr12:26576039-26575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr12:13988521-13988216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 229
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:3623838-3623538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr12:25027609-25027928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 275
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr12:19258423-19258122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr12:36790666-36790973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 188
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr12:37169802-37170107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr12:42784454-42784139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr12:15703348-15703672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:38774098-38774422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr12:46714524-46714184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr12:28131740-28131398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 221
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:11587916-11587578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr12:12637038-12637379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr12:4769066-4768729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr12:17879158-17879499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr12:25280356-25280690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr12:15050478-15050815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr12:33976350-33975998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
65, 215
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr12:30194840-30194501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr12:36544498-36544857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr12:13643382-13643024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 220
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr12:33129401-33129038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr12:30210617-30210249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr12:29899273-29899668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr12:23574917-23574527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr12:35669325-35669711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr12:5635305-5635705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 153
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr12:45363509-45363095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:42282692-42283102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr12:42879846-42879429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 225
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr12:18388140-18388566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr12:17031755-17031329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr12:31532262-31532694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr12:5714765-5714332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr12:6688032-6687572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr12:9914928-9914483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr12:30590916-30590471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr12:30805999-30805543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr12:20776782-20777241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr12:35770877-35771348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr12:34465871-34466329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
191, 54
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr12:6410589-6411064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr12:30919581-30919096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr12:27802911-27803389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr12:42180981-42181483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 270
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr12:21393857-21393352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:4371395-4370889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 276
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:6241471-6240960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:7884533-7884999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 213
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:9143531-9143045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:15089663-15089144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:18123813-18123340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:18577974-18577499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:27563232-27563724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:30170799-30170315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:35310535-35311020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr12:40910138-40910637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr12:25343930-25343680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr12:4596619-4596224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr12:48415374-48415808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr12:19866390-19865895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr12:19261340-19261074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr12:24116228-24116509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr12:6242030-6242348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 204
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr12:23916984-23916667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr12:18103472-18103830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr12:24023666-24024045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr12:39465710-39465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-470
               

               
Cow position:
               
chr12:30745861-30745398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 166
               

               
Conread position:
               
3-486
               

               
Cow position:
               
chr12:42684794-42685280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 170
               

               
Conread position:
               
3-499
               

               
Cow position:
               
chr12:35368789-35368295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr12:22515593-22516082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr12:11836373-11835900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr12:15122470-15121995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 86
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr12:15938125-15938611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr12:19697539-19697065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr12:33323349-33323845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 219
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr12:17269945-17269673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 212
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr12:23446860-23446567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr12:33851500-33851140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 163
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr12:41091678-41091233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 223
               

               
Conread position:
               
5-465
               

               
Cow position:
               
chr12:18518815-18518361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr12:24663262-24662883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
8-456
               

               
Cow position:
               
chr12:4866954-4866515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
8-502
               

               
Cow position:
               
chr12:5631744-5632221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr12:21780303-21780046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr12:4720083-4719773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr12:33298322-33298034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr12:25917138-25917483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
10-383
               

               
Cow position:
               
chr12:28749082-28748706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
10-453
               

               
Cow position:
               
chr12:22882191-22881754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr12:38154931-38155133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
13-295
               

               
Cow position:
               
chr12:24032626-24032357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
13-432
               

               
Cow position:
               
chr12:15784059-15783656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 179
               

               
Conread position:
               
13-502
               

               
Cow position:
               
chr12:10895415-10895895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
13-502
               

               
Cow position:
               
chr12:37771001-37770524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
14-395
               

               
Cow position:
               
chr12:22287410-22287038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 193
               

               
Conread position:
               
18-472
               

               
Cow position:
               
chr12:11057001-11056559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
19-431
               

               
Cow position:
               
chr12:30661820-30662226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
19-452
               

               
Cow position:
               
chr12:41084177-41083769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
21-296
               

               
Cow position:
               
chr12:3371733-3372004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
22-436
               

               
Cow position:
               
chr12:43942598-43942198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
22-491
               

               
Cow position:
               
chr12:4008154-4008621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 173
               

               
Conread position:
               
23-452
               

               
Cow position:
               
chr12:6210040-6210454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
26-501
               

               
Cow position:
               
chr12:7000482-7000950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
26-502
               

               
Cow position:
               
chr12:42254791-42254314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr12:3599648-3599924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
39-502
               

               
Cow position:
               
chr12:30753828-30753379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr12:42174519-42174264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
46-458
               

               
Cow position:
               
chr12:37993629-37994028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr12:33458245-33457843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
53-328
               

               
Cow position:
               
chr12:44920122-44919857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
53-376
               

               
Cow position:
               
chr12:15762822-15763131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
53-432
               

               
Cow position:
               
chr12:29779819-29780179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
68-497
               

               
Cow position:
               
chr12:7978116-7977708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
69-285
               

               
Cow position:
               
chr12:44733014-44733225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
69-294
               

               
Cow position:
               
chr12:15700158-15699931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 198
               

               
Conread position:
               
69-401
               

               
Cow position:
               
chr12:27037372-27037692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
69-425
               

               
Cow position:
               
chr12:25177520-25177864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr12:17001336-17000915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr12:31959957-31959546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr12:44595732-44596161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
70-449
               

               
Cow position:
               
chr12:46314627-46314989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
74-310
               

               
Cow position:
               
chr12:38184667-38184439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
74-368
               

               
Cow position:
               
chr12:45680350-45680054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 145
               

               
Conread position:
               
74-398
               

               
Cow position:
               
chr12:29770506-29770816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr12:24211480-24211163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
74-448
               

               
Cow position:
               
chr12:3950272-3950644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
74-452
               

               
Cow position:
               
chr12:5906129-5905760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
74-452
               

               
Cow position:
               
chr12:19714967-19715324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr12:31429498-31429901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
74-501
               

               
Cow position:
               
chr12:19869533-19869126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
74-501
               

               
Cow position:
               
chr12:29969652-29969233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
74-501
               

               
Cow position:
               
chr12:45820293-45820703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr12:19691161-19691579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr12:30438310-30437904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr12:45814189-45814611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
77-414
               

               
Cow position:
               
chr12:17774864-17774546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
78-502
               

               
Cow position:
               
chr12:21486645-21486249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr12:46120765-46120986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
81-461
               

               
Cow position:
               
chr12:15531120-15530759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
89-384
               

               
Cow position:
               
chr12:3906530-3906239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
216, 73
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr12:25452393-25452655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
95-307
               

               
Cow position:
               
chr12:6102776-6102983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
99-479
               

               
Cow position:
               
chr12:8868834-8869206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
102-306
               

               
Cow position:
               
chr12:7882339-7882138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
103-392
               

               
Cow position:
               
chr12:5658033-5658313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr12:10491312-10491089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr12:28582477-28582785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
115-470
               

               
Cow position:
               
chr12:19664501-19664830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
185, 80
               

               
Conread position:
               
120-412
               

               
Cow position:
               
chr12:40028728-40029012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
120-453
               

               
Cow position:
               
chr12:34007326-34007001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 5
               

               
Conread position:
               
140-502
               

               
Cow position:
               
chr12:1246305-1245947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
148-386
               

               
Cow position:
               
chr12:38454907-38454687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
150-434
               

               
Cow position:
               
chr12:27562831-27563116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr12:26317455-26317162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
249, 63
               

               
Conread position:
               
156-480
               

               
Cow position:
               
chr12:3579276-3578955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
164-432
               

               
Cow position:
               
chr12:12699782-12700052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 48
               

               
Conread position:
               
168-502
               

               
Cow position:
               
chr12:18937384-18937042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
170-310
               

               
Cow position:
               
chr12:17666279-17666141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
170-381
               

               
Cow position:
               
chr12:44559562-44559360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
170-384
               

               
Cow position:
               
chr12:25820454-25820662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
170-385
               

               
Cow position:
               
chr12:38511860-38512072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
170-461
               

               
Cow position:
               
chr12:28650933-28650651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
171-347
               

               
Cow position:
               
chr12:5639122-5638947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
171-425
               

               
Cow position:
               
chr12:12030853-12031106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
171-502
               

               
Cow position:
               
chr12:3568916-3568603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr12:35136630-35136414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
177-423
               

               
Cow position:
               
chr12:17702257-17702501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
185-452
               

               
Cow position:
               
chr12:24032966-24032709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
194-495
               

               
Cow position:
               
chr12:34473670-34473947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
201-502
               

               
Cow position:
               
chr12:5800982-5800691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
204-452
               

               
Cow position:
               
chr12:29694102-29694334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr12:37732842-37733064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
208-480
               

               
Cow position:
               
chr12:47929155-47928886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
209-487
               

               
Cow position:
               
chr12:20326713-20326442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
209-502
               

               
Cow position:
               
chr12:28010961-28011246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr12:19039670-19039961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr12:2805109-2805389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
246, 50
               

               
Conread position:
               
211-501
               

               
Cow position:
               
chr12:32391788-32391498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
212-443
               

               
Cow position:
               
chr12:40110322-40110101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr12:24107610-24107802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
213-500
               

               
Cow position:
               
chr12:44013900-44014185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
217-501
               

               
Cow position:
               
chr12:17982552-17982286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
221-482
               

               
Cow position:
               
chr12:22260894-22261141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
224-417
               

               
Cow position:
               
chr12:29161889-29162073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
224-452
               

               
Cow position:
               
chr12:40270166-40270383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
224-502
               

               
Cow position:
               
chr12:11583321-11583059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
225-501
               

               
Cow position:
               
chr12:26868869-26869142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
233-443
               

               
Cow position:
               
chr12:4134588-4134377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
234-392
               

               
Cow position:
               
chr12:24180812-24180660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
237-425
               

               
Cow position:
               
chr12:8710739-8710561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
244-461
               

               
Cow position:
               
chr12:46635038-46635251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
248-376
               

               
Cow position:
               
chr12:16310338-16310208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
248-500
               

               
Cow position:
               
chr12:44273939-44274189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
262-448
               

               
Cow position:
               
chr12:25805221-25805403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
264-445
               

               
Cow position:
               
chr12:12178809-12178631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.