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Cow genome map

           
Conread name:
           
Pig1-75G13
        

               
Conread position:
               
1-167
               

               
Cow position:
               
chr27:26909817-26909652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr27:26118268-26118451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr27:19576552-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr27:26400946-26400763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr27:24693189-24693377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:31386859-31386645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:26121529-26121746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr27:27740522-27740303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 214
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:23994644-23994414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr27:31210321-31210559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:12459059-12459297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:20897249-20897011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 145
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr27:11982877-11982635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr27:26437349-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
112, 211
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr27:19508783-19509029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 216
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:12425059-12425306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:11561546-11561797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:29593857-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr27:31151155-31151434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr27:23484987-23485276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr27:23560258-23559969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr27:22489043-22489341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
59, 217
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:26112147-26111842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:16965346-16965645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:6924853-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:5982986-5983298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr27:590998-590681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 227
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr27:26852811-26852507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:15865381-15865696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr27:23510746-23511083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 233
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr27:28896649-28896968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr27:22560055-22559725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr27:23594090-23594418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 141
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr27:4858848-4858542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr27:27695004-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:26226517-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr27:20749231-20748886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr27:19500465-19500103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 219
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr27:16103582-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr27:29816858-29816478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr27:7346441-7346822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr27:27438737-27438339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr27:16705024-16705439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr27:22547617-22547211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr27:18031299-18030862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr27:28002032-28001621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr27:30914778-30915199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr27:29086345-29085915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr27:20354371-20354785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr27:15669003-15668558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 234
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr27:10307532-10307080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr27:30764804-30765247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr27:18558129-18558581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr27:2592308-2592762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 269
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr27:4390486-4390030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr27:13639216-13638768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 200
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr27:23554558-23554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr27:10979631-10980106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 222
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr27:16284260-16284715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr27:26865337-26864877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr27:23452234-23452730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 159
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr27:12515965-12516448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr27:30890072-30890537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr27:20283415-20283882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr27:24331485-24331988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 163
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr27:22035600-22035113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr27:26999652-26999165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr27:7412165-7412646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 206
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr27:11435556-11435069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr27:14670609-14670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr27:21978372-21977874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr27:2957188-2957668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:1353351-1353860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 224
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:7959060-7958570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:8353266-8353729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:8630102-8629609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:13318206-13317700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 466
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:13875504-13875993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:15453984-15454478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:16786602-16787097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:17397680-17397190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:18543759-18544263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:19717669-19718181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 226
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:20637287-20636811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:22171073-22171564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:26424805-26424324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 65
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:26434042-26433549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 221
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:27020324-27019838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:28206575-28207063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:28932031-28931525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 229
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:29831937-29831423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 198
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:30407276-30406766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:30868980-30868475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 192
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr27:31373201-31372715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr27:27442388-27442057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
300, 61
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr27:26490133-26489726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr27:19660700-19661158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 219
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr27:22220322-22220796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 149
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr27:28518065-28518537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 212
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr27:28922123-28921641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr27:8962469-8962004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 19
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr27:19387793-19388282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr27:24477198-24477665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr27:6319696-6319904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr27:18646376-18646020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr27:426743-427116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr27:29431249-29431622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr27:23890706-23891104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 222
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr27:30872284-30871891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr27:13841140-13841566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr27:12596555-12596978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr27:27389254-27388786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
3-494
               

               
Cow position:
               
chr27:26509383-26508904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
3-495
               

               
Cow position:
               
chr27:435005-435502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr27:15867166-15867650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr27:1637153-1636681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr27:23128238-23128719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr27:23859937-23860221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr27:29380635-29381009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
4-439
               

               
Cow position:
               
chr27:27003485-27003079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
4-446
               

               
Cow position:
               
chr27:26238798-26239233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr27:27632819-27632394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr27:8168646-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr27:3306561-3306921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr27:7935383-7934931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 210
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr27:28478363-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr27:29613711-29613449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 208
               

               
Conread position:
               
10-477
               

               
Cow position:
               
chr27:6541415-6541865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
10-502
               

               
Cow position:
               
chr27:11536327-11535833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 208
               

               
Conread position:
               
10-502
               

               
Cow position:
               
chr27:22427055-22426565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
12-500
               

               
Cow position:
               
chr27:15925124-15925597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 201
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr27:31231295-31230834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr27:17995158-17994841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
18-502
               

               
Cow position:
               
chr27:1768834-1768373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr27:20514609-20514882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr27:13251813-13252195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
22-399
               

               
Cow position:
               
chr27:19896555-19896919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
28-502
               

               
Cow position:
               
chr27:26959817-26959358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
32-502
               

               
Cow position:
               
chr27:24227994-24227528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
34-347
               

               
Cow position:
               
chr27:23545524-23545206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
36-273
               

               
Cow position:
               
chr27:5553273-5553511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
36-502
               

               
Cow position:
               
chr27:15866025-15866486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
36-502
               

               
Cow position:
               
chr27:26807753-26807301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
40-299
               

               
Cow position:
               
chr27:7973984-7974240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
46-397
               

               
Cow position:
               
chr27:27270724-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr27:22225773-22225528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
53-464
               

               
Cow position:
               
chr27:20795619-20796011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
53-502
               

               
Cow position:
               
chr27:6550288-6550716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
60-389
               

               
Cow position:
               
chr27:28271319-28270994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
61-495
               

               
Cow position:
               
chr27:8942857-8942428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 163
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr27:21453259-21452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
68-502
               

               
Cow position:
               
chr27:4386222-4385800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 148
               

               
Conread position:
               
69-307
               

               
Cow position:
               
chr27:15215067-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
69-418
               

               
Cow position:
               
chr27:30988638-30988979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
69-460
               

               
Cow position:
               
chr27:27641170-27640769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
69-501
               

               
Cow position:
               
chr27:27038997-27038576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr27:536305-536718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr27:27064599-27064179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 146
               

               
Conread position:
               
70-411
               

               
Cow position:
               
chr27:9169796-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
230, 23
               

               
Conread position:
               
70-452
               

               
Cow position:
               
chr27:20553573-20553932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
71-446
               

               
Cow position:
               
chr27:22454934-22454570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
74-275
               

               
Cow position:
               
chr27:17918468-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
74-344
               

               
Cow position:
               
chr27:31148607-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr27:16589856-16589570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
74-452
               

               
Cow position:
               
chr27:26134997-26135375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
253, 25
               

               
Conread position:
               
74-460
               

               
Cow position:
               
chr27:12246499-12246881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
74-498
               

               
Cow position:
               
chr27:23483072-23483486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
75-333
               

               
Cow position:
               
chr27:8263492-8263235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
77-359
               

               
Cow position:
               
chr27:20092986-20092712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 170
               

               
Conread position:
               
78-404
               

               
Cow position:
               
chr27:15643024-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
80-484
               

               
Cow position:
               
chr27:30354493-30354100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
81-474
               

               
Cow position:
               
chr27:18593125-18593503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr27:7731392-7731099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
99-410
               

               
Cow position:
               
chr27:6159851-6160155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
99-502
               

               
Cow position:
               
chr27:7212843-7212457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 117
               

               
Conread position:
               
111-374
               

               
Cow position:
               
chr27:20918774-20919030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
62, 58
               

               
Conread position:
               
120-502
               

               
Cow position:
               
chr27:12429299-12429677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
120-502
               

               
Cow position:
               
chr27:21351129-21350750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 28
               

               
Conread position:
               
124-377
               

               
Cow position:
               
chr27:20789483-20789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
135-502
               

               
Cow position:
               
chr27:24999833-24999471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 80
               

               
Conread position:
               
137-441
               

               
Cow position:
               
chr27:2683236-2682939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
163, 79
               

               
Conread position:
               
155-382
               

               
Cow position:
               
chr27:7538150-7537927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
157-434
               

               
Cow position:
               
chr27:21569911-21569646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
170-405
               

               
Cow position:
               
chr27:22268443-22268673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
170-458
               

               
Cow position:
               
chr27:1183942-1183655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr27:31147727-31147422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr27:8292059-8291745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
266, 25
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr27:16237851-16238161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
237, 45
               

               
Conread position:
               
171-347
               

               
Cow position:
               
chr27:4011622-4011793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
171-454
               

               
Cow position:
               
chr27:1058738-1058463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
171-502
               

               
Cow position:
               
chr27:30362189-30362508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr27:29236522-29236682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
172-337
               

               
Cow position:
               
chr27:20570064-20570226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr27:23070413-23070100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
175-359
               

               
Cow position:
               
chr27:10395312-10395135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
175-448
               

               
Cow position:
               
chr27:706897-707158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
181-448
               

               
Cow position:
               
chr27:16871963-16871708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
194-425
               

               
Cow position:
               
chr27:20591945-20592172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
195-502
               

               
Cow position:
               
chr27:13197883-13198171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
196-448
               

               
Cow position:
               
chr27:28164435-28164200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
196-498
               

               
Cow position:
               
chr27:5915714-5915414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
202-502
               

               
Cow position:
               
chr27:29399784-29400081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
205-458
               

               
Cow position:
               
chr27:6620118-6620367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
207-497
               

               
Cow position:
               
chr27:21138797-21139087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
209-457
               

               
Cow position:
               
chr27:20369007-20369259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
211-419
               

               
Cow position:
               
chr27:27550763-27550565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
211-443
               

               
Cow position:
               
chr27:18215031-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
211-458
               

               
Cow position:
               
chr27:28038362-28038116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
211-502
               

               
Cow position:
               
chr27:9090822-9090536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
211-502
               

               
Cow position:
               
chr27:28190236-28189952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
213-432
               

               
Cow position:
               
chr27:18434489-18434278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
217-389
               

               
Cow position:
               
chr27:14343481-14343315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
217-425
               

               
Cow position:
               
chr27:31499048-31499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
220-487
               

               
Cow position:
               
chr27:23455167-23454900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
221-452
               

               
Cow position:
               
chr27:22498546-22498768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
189, 42
               

               
Conread position:
               
226-440
               

               
Cow position:
               
chr27:27055568-27055781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
235-502
               

               
Cow position:
               
chr27:16619991-16620253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
251-452
               

               
Cow position:
               
chr27:22179775-22179582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
266-502
               

               
Cow position:
               
chr27:14632870-14633103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
42, 51
               
Show alignments to all cow chromosomes.