• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig1-75G13
        

               
Conread position:
               
1-136
               

               
Cow position:
               
chr28:21263344-21263210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr28:16200550-16200704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr28:2077691-2077530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr28:32014975-32014806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:5188240-5188432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:5674062-5673872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr28:15362768-15362575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr28:8304432-8304224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr28:5255061-5254846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr28:11398604-11398824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr28:4013273-4013050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr28:17740015-17739788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr28:3726018-3726262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr28:3445290-3445533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr28:11814889-11815136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr28:10978028-10977784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr28:20397176-20397429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 217
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr28:5630289-5630017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr28:3410799-3411066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr28:4046034-4045770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 158
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr28:7350840-7350575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr28:777866-777580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr28:11197482-11197771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 157
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr28:5138809-5139097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr28:17071530-17071232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 228
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr28:19564045-19564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr28:3011077-3011385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr28:12933546-12933845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr28:3484776-3484461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
67, 190
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr28:6358220-6358530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 200
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:11079490-11079185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:5193513-5193193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:12672271-12672587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr28:5273237-5273567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 230
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr28:11346299-11346614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr28:8140674-8140351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr28:3449499-3449164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr28:13245754-13245402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 218
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr28:24082460-24082117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 266
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr28:8291603-8291271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr28:5200017-5199662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 218
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr28:4643580-4643939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr28:14720594-14720953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 194
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:6091546-6091174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:4834653-4835041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr28:4884063-4884476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr28:5436896-5437301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr28:10053142-10053565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:751418-750997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:9100118-9099704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:12951606-12951202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 145
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:9285187-9285613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr28:9636267-9636696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 217
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr28:11422629-11423045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr28:5074331-5074746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr28:3078506-3078930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr28:29416535-29416972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr28:16369899-16370328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr28:27218515-27218065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr28:21502572-21502137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 21
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr28:3492597-3493043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr28:16204140-16204592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 220
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr28:23460334-23459876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr28:23410144-23410596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr28:616559-616127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
469, 57
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr28:15263528-15263999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr28:26743821-26743340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr28:7144990-7144505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 229
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr28:24966576-24966093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr28:5204375-5203899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr28:3143695-3144188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr28:25057146-25056670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr28:9426162-9426644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr28:21845141-21844654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:3023726-3024212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:3746387-3745900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:3914895-3914407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:4071148-4070661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:4282299-4282795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:4307703-4308201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 267
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:7697789-7698280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:8347924-8347419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 215
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:8787729-8787247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:10606448-10606915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:10615760-10616253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:10669777-10669271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 236
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:15601464-15600961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:20124971-20124486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:21363930-21363455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:21868647-21868148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 216
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:22133098-22132623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:23616595-23616099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:25400057-25399587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:25700680-25701163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr28:34877782-34878273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr28:23296508-23296212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr28:18369824-18370123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr28:23724280-23724643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr28:4016712-4016304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr28:26719519-26719107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr28:23007553-23008027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr28:22323448-22322962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 78
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr28:17680813-17680584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr28:31223369-31223671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr28:26055666-26055366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr28:29988921-29989282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 216
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr28:26982548-26982938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr28:5144326-5144754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 219
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr28:5684888-5684402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr28:5827119-5826645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 64
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr28:12430795-12430306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr28:16346350-16346819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr28:20409579-20409079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr28:30326913-30327387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr28:7131904-7132120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr28:8147678-8147953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
6-501
               

               
Cow position:
               
chr28:16210916-16211399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
9-502
               

               
Cow position:
               
chr28:11527077-11527557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
9-502
               

               
Cow position:
               
chr28:22332712-22332247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
10-202
               

               
Cow position:
               
chr28:13048100-13048296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
10-482
               

               
Cow position:
               
chr28:30303027-30303476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 54
               

               
Conread position:
               
10-500
               

               
Cow position:
               
chr28:4138486-4138979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
10-502
               

               
Cow position:
               
chr28:10745396-10744902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
11-502
               

               
Cow position:
               
chr28:7512401-7512893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 164
               

               
Conread position:
               
19-257
               

               
Cow position:
               
chr28:33322629-33322390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
19-285
               

               
Cow position:
               
chr28:11559461-11559724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
19-359
               

               
Cow position:
               
chr28:13527371-13527039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
19-388
               

               
Cow position:
               
chr28:30937506-30937856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
144, 43
               

               
Conread position:
               
19-502
               

               
Cow position:
               
chr28:25727545-25727078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
22-392
               

               
Cow position:
               
chr28:4881074-4881439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
22-448
               

               
Cow position:
               
chr28:26103867-26103466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
22-462
               

               
Cow position:
               
chr28:3408053-3408480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 44
               

               
Conread position:
               
22-502
               

               
Cow position:
               
chr28:16085483-16085022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
23-440
               

               
Cow position:
               
chr28:22346193-22345778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 217
               

               
Conread position:
               
36-336
               

               
Cow position:
               
chr28:9812427-9812142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
36-456
               

               
Cow position:
               
chr28:23793156-23793558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
36-461
               

               
Cow position:
               
chr28:26533701-26533280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
37-502
               

               
Cow position:
               
chr28:28765746-28766213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
44-345
               

               
Cow position:
               
chr28:25728341-25728049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
45-498
               

               
Cow position:
               
chr28:25249495-25249057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
48-470
               

               
Cow position:
               
chr28:23676284-23675873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
54-448
               

               
Cow position:
               
chr28:22321556-22321173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
59-502
               

               
Cow position:
               
chr28:7865464-7865028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 166
               

               
Conread position:
               
69-339
               

               
Cow position:
               
chr28:27161206-27161474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
69-452
               

               
Cow position:
               
chr28:33052157-33051767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
69-457
               

               
Cow position:
               
chr28:8408845-8408479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
69-458
               

               
Cow position:
               
chr28:19025884-19026262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr28:29199851-29199419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
72-334
               

               
Cow position:
               
chr28:22571550-22571804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr28:2752378-2752681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
74-398
               

               
Cow position:
               
chr28:14512649-14512326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 195
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr28:19222035-19222448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr28:20313393-20312971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr28:21598134-21598556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
75-494
               

               
Cow position:
               
chr28:26922253-26922667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
77-368
               

               
Cow position:
               
chr28:32365956-32365675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
78-502
               

               
Cow position:
               
chr28:21380992-21380578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
80-441
               

               
Cow position:
               
chr28:4841280-4841639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 173
               

               
Conread position:
               
84-347
               

               
Cow position:
               
chr28:2873025-2872765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
99-337
               

               
Cow position:
               
chr28:18186647-18186412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
99-456
               

               
Cow position:
               
chr28:18934545-18934195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
99-502
               

               
Cow position:
               
chr28:18591361-18590967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
102-502
               

               
Cow position:
               
chr28:12947037-12946642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
105-481
               

               
Cow position:
               
chr28:18354249-18354602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
197, 43
               

               
Conread position:
               
107-304
               

               
Cow position:
               
chr28:12363075-12363270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
147, 107
               

               
Conread position:
               
111-486
               

               
Cow position:
               
chr28:31987692-31987318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
115-502
               

               
Cow position:
               
chr28:25806647-25806294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
187, 99
               

               
Conread position:
               
116-420
               

               
Cow position:
               
chr28:18625307-18625001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
116-500
               

               
Cow position:
               
chr28:17637792-17638165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
132-409
               

               
Cow position:
               
chr28:3714858-3714591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr28:4058039-4057733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
135-334
               

               
Cow position:
               
chr28:23447770-23447962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
183, 80
               

               
Conread position:
               
144-493
               

               
Cow position:
               
chr28:9390321-9390659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
148-461
               

               
Cow position:
               
chr28:16252815-16253117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 81
               

               
Conread position:
               
151-382
               

               
Cow position:
               
chr28:28903624-28903850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
162-348
               

               
Cow position:
               
chr28:7607949-7608133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
162-502
               

               
Cow position:
               
chr28:5552913-5553229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
246, 7
               

               
Conread position:
               
170-388
               

               
Cow position:
               
chr28:118031-118245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
170-389
               

               
Cow position:
               
chr28:19024164-19023942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 91
               

               
Conread position:
               
170-433
               

               
Cow position:
               
chr28:19394638-19394395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
255, 48
               

               
Conread position:
               
170-501
               

               
Cow position:
               
chr28:4022407-4022080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
170-501
               

               
Cow position:
               
chr28:10900836-10900518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
170-502
               

               
Cow position:
               
chr28:4880245-4880567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
171-404
               

               
Cow position:
               
chr28:22739810-22739595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
171-500
               

               
Cow position:
               
chr28:8681821-8682152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr28:19515373-19515695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
175-348
               

               
Cow position:
               
chr28:7542068-7542238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
175-486
               

               
Cow position:
               
chr28:22170695-22171006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr28:657439-657625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
178-307
               

               
Cow position:
               
chr28:7644465-7644336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
178-451
               

               
Cow position:
               
chr28:13607900-13607633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
240, 42
               

               
Conread position:
               
183-377
               

               
Cow position:
               
chr28:13290123-13290313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
184-457
               

               
Cow position:
               
chr28:6861960-6861695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
222, 17
               

               
Conread position:
               
184-498
               

               
Cow position:
               
chr28:27428752-27428455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
287, 40
               

               
Conread position:
               
192-492
               

               
Cow position:
               
chr28:7228381-7228677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
195-502
               

               
Cow position:
               
chr28:34082018-34082321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
201-461
               

               
Cow position:
               
chr28:16243765-16244021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
205-502
               

               
Cow position:
               
chr28:2124416-2124136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
208-458
               

               
Cow position:
               
chr28:6051719-6051477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
209-426
               

               
Cow position:
               
chr28:13447682-13447481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
210-501
               

               
Cow position:
               
chr28:13356592-13356884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
210-501
               

               
Cow position:
               
chr28:23840185-23839910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
210-502
               

               
Cow position:
               
chr28:31971770-31972055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr28:1837976-1837767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
214-428
               

               
Cow position:
               
chr28:8656762-8656965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr28:15008140-15007861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 47
               

               
Conread position:
               
217-461
               

               
Cow position:
               
chr28:24996612-24996851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
224-419
               

               
Cow position:
               
chr28:5188435-5188622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
224-502
               

               
Cow position:
               
chr28:11451494-11451778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
224-502
               

               
Cow position:
               
chr28:17288188-17287925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 37
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr28:17738113-17738382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
236-451
               

               
Cow position:
               
chr28:16354648-16354872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
240-502
               

               
Cow position:
               
chr28:22304799-22304554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr28:16441323-16441087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 9
               
Show alignments to all cow chromosomes.