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Cow genome map

           
Conread name:
           
Pig1-75G13
        

               
Conread position:
               
1-151
               

               
Cow position:
               
chr29:34359642-34359790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr29:14746962-14746796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 129
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr29:22576994-22577166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr29:16200292-16200494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:26540356-26540569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr29:17804714-17804504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:4070804-4070583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr29:22166903-22167138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr29:43544421-43544661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr29:23812864-23813102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr29:36632676-36632927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 217
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr29:44139061-44139311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 150
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr29:32656620-32656358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 234
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr29:18449954-18450210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr29:32894441-32894184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr29:15947353-15947083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 212
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr29:1615111-1614818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr29:5520300-5520612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 279
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr29:5046837-5046544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr29:30227096-30227407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr29:35084039-35084370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr29:31674815-31674471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 215
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr29:4085480-4085146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr29:37618492-37618123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 226
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr29:25092288-25091910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr29:26259660-26259276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr29:22690411-22690014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 214
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr29:6337835-6337450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr29:30441123-30440711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr29:31489508-31489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 222
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr29:3711560-3711161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr29:25268322-25267887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 273
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr29:19949489-19949073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 157
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr29:34773565-34773964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr29:4520516-4520098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr29:23698154-23697740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr29:11916005-11915574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr29:12783771-12784211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 168
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr29:34297387-34297821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr29:17222600-17222151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr29:22613605-22613175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr29:31929170-31928716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr29:40891523-40891965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr29:29769170-29769610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr29:41531035-41530585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr29:12680342-12679888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr29:17462595-17463045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr29:22068557-22069013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr29:39111140-39111586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr29:18878298-18878782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr29:699444-699898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 66
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr29:22162080-22162547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr29:35405606-35406085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr29:20933899-20933402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 259
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr29:2644137-2644613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr29:35292270-35291792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr29:35501481-35501952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr29:4479983-4480482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 176
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr29:9709877-9709390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr29:19428835-19428364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr29:26017316-26017820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr29:28195349-28195825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:732794-732316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:2744085-2744582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:4121040-4120542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 266
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:10058359-10058837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:16609934-16609430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 269
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:16657875-16657381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 71
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:19762447-19761965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:23874646-23874147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 222
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:32799519-32800017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 159
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:35458585-35459069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:36531050-36530553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr29:40117749-40117261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr29:17110136-17109672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr29:5893029-5892540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr29:43328815-43328327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr29:14577039-14576859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr29:36952130-36952372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr29:5408960-5409321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr29:26275783-26275403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr29:42363837-42364301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr29:26779058-26778581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr29:22723777-22723576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr29:23825031-23825260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr29:1007999-1007708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr29:34358797-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr29:17154943-17154622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
213, 63
               

               
Conread position:
               
6-502
               

               
Cow position:
               
chr29:465219-465709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
9-252
               

               
Cow position:
               
chr29:32733472-32733233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr29:7621382-7621716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr29:28739803-28739408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 203
               

               
Conread position:
               
9-461
               

               
Cow position:
               
chr29:8669531-8669087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
9-500
               

               
Cow position:
               
chr29:29057352-29056875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr29:17168580-17168295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr29:20910515-20910891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 170
               

               
Conread position:
               
10-452
               

               
Cow position:
               
chr29:19389655-19389226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 206
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr29:28674528-28674814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 217
               

               
Conread position:
               
13-252
               

               
Cow position:
               
chr29:38347855-38348096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
18-501
               

               
Cow position:
               
chr29:21443169-21443653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
19-405
               

               
Cow position:
               
chr29:22778012-22778395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
19-488
               

               
Cow position:
               
chr29:45589434-45589881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
22-346
               

               
Cow position:
               
chr29:12025313-12025629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
25-502
               

               
Cow position:
               
chr29:24624407-24623931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
36-502
               

               
Cow position:
               
chr29:34745508-34745964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
37-464
               

               
Cow position:
               
chr29:7966393-7965981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 218
               

               
Conread position:
               
50-502
               

               
Cow position:
               
chr29:31926155-31926600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
53-461
               

               
Cow position:
               
chr29:19339129-19338710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
53-479
               

               
Cow position:
               
chr29:749775-750185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
53-502
               

               
Cow position:
               
chr29:40097092-40096655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
62-461
               

               
Cow position:
               
chr29:25333340-25333722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
68-502
               

               
Cow position:
               
chr29:4874765-4875213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
69-267
               

               
Cow position:
               
chr29:13867096-13867291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 147
               

               
Conread position:
               
69-334
               

               
Cow position:
               
chr29:36220648-36220382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
69-380
               

               
Cow position:
               
chr29:11647208-11646915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
69-458
               

               
Cow position:
               
chr29:22175795-22175427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
69-488
               

               
Cow position:
               
chr29:26991356-26990947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
69-498
               

               
Cow position:
               
chr29:22936385-22935975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
69-502
               

               
Cow position:
               
chr29:86898-87323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
70-259
               

               
Cow position:
               
chr29:7103671-7103483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
73-347
               

               
Cow position:
               
chr29:26416461-26416201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr29:43008975-43009285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
74-417
               

               
Cow position:
               
chr29:38581088-38580752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
74-452
               

               
Cow position:
               
chr29:16195949-16195592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
74-458
               

               
Cow position:
               
chr29:9912284-9911913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
74-465
               

               
Cow position:
               
chr29:1022404-1022005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
74-491
               

               
Cow position:
               
chr29:40583894-40583498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr29:13372772-13372356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr29:17409444-17409024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
75-502
               

               
Cow position:
               
chr29:45005521-45005926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
77-307
               

               
Cow position:
               
chr29:21941707-21941480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
78-291
               

               
Cow position:
               
chr29:24578968-24578755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
79-333
               

               
Cow position:
               
chr29:44008681-44008927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr29:12625873-12626098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 142
               

               
Conread position:
               
80-403
               

               
Cow position:
               
chr29:26653941-26654252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
80-502
               

               
Cow position:
               
chr29:32290713-32290292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
81-326
               

               
Cow position:
               
chr29:27329994-27329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
82-502
               

               
Cow position:
               
chr29:28868744-28868321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
89-357
               

               
Cow position:
               
chr29:29942633-29942902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
94-398
               

               
Cow position:
               
chr29:41365198-41364903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
94-440
               

               
Cow position:
               
chr29:23983866-23984212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
95-319
               

               
Cow position:
               
chr29:8176743-8176517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr29:4051904-4052128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
99-454
               

               
Cow position:
               
chr29:5098682-5099024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
99-502
               

               
Cow position:
               
chr29:39567766-39567376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
102-323
               

               
Cow position:
               
chr29:29795301-29795523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
107-502
               

               
Cow position:
               
chr29:6293402-6293774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
111-425
               

               
Cow position:
               
chr29:24103470-24103782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
115-461
               

               
Cow position:
               
chr29:40166311-40165973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 99
               

               
Conread position:
               
115-501
               

               
Cow position:
               
chr29:26615653-26616045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 100
               

               
Conread position:
               
117-380
               

               
Cow position:
               
chr29:27652563-27652818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
120-343
               

               
Cow position:
               
chr29:29314590-29314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
121-502
               

               
Cow position:
               
chr29:2071510-2071878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
125-502
               

               
Cow position:
               
chr29:17131562-17131927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
127-427
               

               
Cow position:
               
chr29:22585346-22585643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
158, 89
               

               
Conread position:
               
129-433
               

               
Cow position:
               
chr29:24119686-24119978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
147-488
               

               
Cow position:
               
chr29:17071-17400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
148-407
               

               
Cow position:
               
chr29:14484503-14484761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr29:41811553-41811884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
157-383
               

               
Cow position:
               
chr29:17301559-17301333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
186, 104
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr29:21534647-21534996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
158-461
               

               
Cow position:
               
chr29:2984915-2984618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
164-425
               

               
Cow position:
               
chr29:42886407-42886147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr29:40615506-40615693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chr29:35636444-35636147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
173-428
               

               
Cow position:
               
chr29:1395607-1395369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
175-422
               

               
Cow position:
               
chr29:39643183-39642946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
185-356
               

               
Cow position:
               
chr29:25432396-25432235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
185-409
               

               
Cow position:
               
chr29:28446251-28446477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
192-502
               

               
Cow position:
               
chr29:9686009-9686319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 27
               

               
Conread position:
               
194-501
               

               
Cow position:
               
chr29:44310031-44310337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
197-476
               

               
Cow position:
               
chr29:27726472-27726210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
205-455
               

               
Cow position:
               
chr29:4194136-4194384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
205-502
               

               
Cow position:
               
chr29:13554118-13553835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
209-424
               

               
Cow position:
               
chr29:43496026-43495827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
210-336
               

               
Cow position:
               
chr29:26411781-26411906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr29:28979510-28979674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
210-502
               

               
Cow position:
               
chr29:17668466-17668196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
211-458
               

               
Cow position:
               
chr29:94578-94811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
211-501
               

               
Cow position:
               
chr29:29551291-29551014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
212-439
               

               
Cow position:
               
chr29:36183256-36183029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
212-502
               

               
Cow position:
               
chr29:32963532-32963230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
213-334
               

               
Cow position:
               
chr29:29263004-29262886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
214-384
               

               
Cow position:
               
chr29:6870816-6870977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
214-458
               

               
Cow position:
               
chr29:6217575-6217814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr29:19821258-19821068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
217-502
               

               
Cow position:
               
chr29:4066055-4065780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
224-502
               

               
Cow position:
               
chr29:12798882-12798622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
227-502
               

               
Cow position:
               
chr29:20178173-20178440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
229-501
               

               
Cow position:
               
chr29:29477076-29477341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
234-500
               

               
Cow position:
               
chr29:13615684-13615957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
242-456
               

               
Cow position:
               
chr29:4691733-4691950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
245-433
               

               
Cow position:
               
chr29:10659396-10659589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr29:26519522-26519770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
262-471
               

               
Cow position:
               
chr29:17135772-17135572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
264-502
               

               
Cow position:
               
chr29:686262-686501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
278-502
               

               
Cow position:
               
chr29:37470654-37470879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
179, 0
               
Show alignments to all cow chromosomes.