Cow genome map

Conread name: Pig1-75G13

Conread position: 1-166
Cow position: chr5:24915313-24915483 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-179
Cow position: chr5:38040356-38040533 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 63

Conread position: 1-179
Cow position: chr5:53980540-53980723 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 1-191
Cow position: chr5:17828265-17828460 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-200
Cow position: chr5:64060658-64060456 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 147

Conread position: 1-204
Cow position: chr5:7177364-7177157 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-210
Cow position: chr5:61049546-61049332 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 1-212
Cow position: chr5:5760097-5760315 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 123

Conread position: 1-213
Cow position: chr5:30562140-30561929 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 63

Conread position: 1-213
Cow position: chr5:60514813-60515031 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 130

Conread position: 1-213
Cow position: chr5:69383463-69383252 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 73

Conread position: 1-216
Cow position: chr5:51065727-51065524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 156, 88

Conread position: 1-221
Cow position: chr5:48867258-48867476 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 111, 65

Conread position: 1-222
Cow position: chr5:57062316-57062541 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 69

Conread position: 1-223
Cow position: chr5:52853179-52852958 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 63

Conread position: 1-239
Cow position: chr5:69099931-69099693 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 221

Conread position: 1-244
Cow position: chr5:26548931-26549172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 111, 74

Conread position: 1-251
Cow position: chr5:50101166-50101415 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 112, 63

Conread position: 1-252
Cow position: chr5:20288046-20288302 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 226

Conread position: 1-258
Cow position: chr5:72006285-72006537 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 20

Conread position: 1-268
Cow position: chr5:63241191-63240923 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 222

Conread position: 1-277
Cow position: chr5:7012637-7012910 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 101

Conread position: 1-277
Cow position: chr5:11769484-11769206 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 160

Conread position: 1-277
Cow position: chr5:20843186-20843462 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 38

Conread position: 1-277
Cow position: chr5:59626760-59627036 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 90

Conread position: 1-294
Cow position: chr5:19752513-19752226 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 146

Conread position: 1-296
Cow position: chr5:65140512-65140206 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 88

Conread position: 1-303
Cow position: chr5:43403121-43402812 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 96

Conread position: 1-304
Cow position: chr5:57526715-57527007 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 116

Conread position: 1-307
Cow position: chr5:17554823-17555123 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 88

Conread position: 1-307
Cow position: chr5:31475896-31475592 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 219

Conread position: 1-310
Cow position: chr5:56613351-56613669 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 261

Conread position: 1-312
Cow position: chr5:30233122-30232802 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 65

Conread position: 1-312
Cow position: chr5:33834252-33833948 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 113

Conread position: 1-316
Cow position: chr5:36650767-36650448 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 214

Conread position: 1-320
Cow position: chr5:53947111-53946790 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 221

Conread position: 1-322
Cow position: chr5:57767776-57768090 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 17

Conread position: 1-324
Cow position: chr5:14920714-14921039 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 198

Conread position: 1-330
Cow position: chr5:12902131-12901800 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 157

Conread position: 1-340
Cow position: chr5:19335565-19335912 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 229

Conread position: 1-343
Cow position: chr5:49474342-49474670 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 65

Conread position: 1-351
Cow position: chr5:18289330-18288993 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 58

Conread position: 1-359
Cow position: chr5:70951681-70952020 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 67

Conread position: 1-360
Cow position: chr5:7057185-7057542 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 136

Conread position: 1-373
Cow position: chr5:35246895-35247265 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 202

Conread position: 1-374
Cow position: chr5:47696248-47696598 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 57

Conread position: 1-379
Cow position: chr5:45397777-45397418 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 111, 20

Conread position: 1-381
Cow position: chr5:12673268-12673627 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 145

Conread position: 1-381
Cow position: chr5:29097574-29097193 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 114, 53

Conread position: 1-384
Cow position: chr5:55956122-55955740 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 1-384
Cow position: chr5:66972642-66972257 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 1-385
Cow position: chr5:30628941-30629324 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 94

Conread position: 1-388
Cow position: chr5:11539840-11540213 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 113

Conread position: 1-389
Cow position: chr5:56014934-56014564 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 111, 57

Conread position: 1-396
Cow position: chr5:41452479-41452844 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 1-397
Cow position: chr5:34625160-34624790 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 60

Conread position: 1-403
Cow position: chr5:46512556-46512951 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 69, 20

Conread position: 1-408
Cow position: chr5:48009669-48010036 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 251, 35

Conread position: 1-414
Cow position: chr5:44446663-44447082 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 57

Conread position: 1-415
Cow position: chr5:34562221-34561812 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 1-418
Cow position: chr5:17371483-17371900 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 270
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 166

Conread position: 1-422
Cow position: chr5:34976627-34977039 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 274
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 215

Conread position: 1-423
Cow position: chr5:7044494-7044915 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 63

Conread position: 1-425
Cow position: chr5:51053436-51053854 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 192

Conread position: 1-432
Cow position: chr5:4280656-4280251 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 65

Conread position: 1-433
Cow position: chr5:35235475-35235923 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 283

Conread position: 1-439
Cow position: chr5:2309346-2309785 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 1-440
Cow position: chr5:22242562-22243006 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 42

Conread position: 1-440
Cow position: chr5:56028333-56028751 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 66

Conread position: 1-447
Cow position: chr5:16937822-16938236 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 301, 63

Conread position: 1-448
Cow position: chr5:16025271-16025689 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 57

Conread position: 1-448
Cow position: chr5:30253952-30253516 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 50

Conread position: 1-450
Cow position: chr5:56071070-56070622 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 85

Conread position: 1-452
Cow position: chr5:17062867-17063327 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 198

Conread position: 1-452
Cow position: chr5:29352920-29353362 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 57

Conread position: 1-454
Cow position: chr5:41165294-41164853 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 63

Conread position: 1-456
Cow position: chr5:72903028-72903461 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 64

Conread position: 1-457
Cow position: chr5:40109696-40109263 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 57

Conread position: 1-458
Cow position: chr5:11667972-11668417 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 144

Conread position: 1-461
Cow position: chr5:55966661-55967125 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 100

Conread position: 1-461
Cow position: chr5:58144392-58144848 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 15

Conread position: 1-476
Cow position: chr5:19278491-19278950 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 58, 94

Conread position: 1-487
Cow position: chr5:42064419-42063935 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 225

Conread position: 1-489
Cow position: chr5:64175918-64176389 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 60

Conread position: 1-492
Cow position: chr5:20779187-20779654 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 169

Conread position: 1-498
Cow position: chr5:57328009-57327509 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 68

Conread position: 1-499
Cow position: chr5:50600258-50599786 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 189

Conread position: 1-500
Cow position: chr5:47602020-47601530 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 42

Conread position: 1-500
Cow position: chr5:52164961-52165460 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 114

Conread position: 1-500
Cow position: chr5:67932254-67932745 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 339
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 96

Conread position: 1-500
Cow position: chr5:68605075-68604572 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 337
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 175

Conread position: 1-501
Cow position: chr5:14550370-14550868 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 1-501
Cow position: chr5:35208475-35207979 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 164

Conread position: 1-501
Cow position: chr5:44847815-44848293 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 90

Conread position: 1-502
Cow position: chr5:58718-59207 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 134

Conread position: 1-502
Cow position: chr5:3242283-3242748 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 65

Conread position: 1-502
Cow position: chr5:21617667-21617172 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 73

Conread position: 1-502
Cow position: chr5:21829076-21828573 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 1-502
Cow position: chr5:26097502-26097014 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 184

Conread position: 1-502
Cow position: chr5:29828260-29827770 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 1-502
Cow position: chr5:29903331-29903805 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 44

Conread position: 1-502
Cow position: chr5:30276899-30276412 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 1-502
Cow position: chr5:30303093-30302615 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 65

Conread position: 1-502
Cow position: chr5:30487439-30486968 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 110

Conread position: 1-502
Cow position: chr5:31096590-31097088 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 49

Conread position: 1-502
Cow position: chr5:33414196-33414688 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 137

Conread position: 1-502
Cow position: chr5:35123309-35123827 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 344
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 114, 53

Conread position: 1-502
Cow position: chr5:39447313-39447818 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 227

Conread position: 1-502
Cow position: chr5:43858206-43858711 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 144

Conread position: 1-502
Cow position: chr5:43922959-43923432 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 43

Conread position: 1-502
Cow position: chr5:45845478-45845976 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 88

Conread position: 1-502
Cow position: chr5:47316763-47317251 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 1-502
Cow position: chr5:47756984-47756485 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 163

Conread position: 1-502
Cow position: chr5:47870842-47871333 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 35

Conread position: 1-502
Cow position: chr5:50723260-50722767 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 211

Conread position: 1-502
Cow position: chr5:53055347-53055836 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 211

Conread position: 1-502
Cow position: chr5:55177092-55176609 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 28

Conread position: 1-502
Cow position: chr5:57934908-57935396 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 57

Conread position: 1-502
Cow position: chr5:62107272-62107778 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 198

Conread position: 1-502
Cow position: chr5:63647265-63647750 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 1-502
Cow position: chr5:74643472-74643944 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 63

Conread position: 2-217
Cow position: chr5:34914843-34915060 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 2-221
Cow position: chr5:55783750-55783960 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 147

Conread position: 2-247
Cow position: chr5:65760323-65760568 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 97

Conread position: 2-326
Cow position: chr5:60016375-60016056 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 88

Conread position: 2-409
Cow position: chr5:5856071-5855689 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 191

Conread position: 2-448
Cow position: chr5:3772053-3771617 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 54

Conread position: 2-456
Cow position: chr5:20128265-20127817 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 2-500
Cow position: chr5:42845386-42845881 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 20

Conread position: 3-183
Cow position: chr5:34288044-34288223 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 144

Conread position: 3-249
Cow position: chr5:57101316-57101561 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 86

Conread position: 3-261
Cow position: chr5:52001414-52001668 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 15

Conread position: 3-284
Cow position: chr5:41935445-41935726 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 110

Conread position: 3-293
Cow position: chr5:49668693-49668400 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 19

Conread position: 3-319
Cow position: chr5:12557077-12557396 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 134

Conread position: 3-346
Cow position: chr5:33560528-33560865 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 112, 62

Conread position: 3-348
Cow position: chr5:991684-991333 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 226

Conread position: 3-359
Cow position: chr5:12760910-12761260 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 109

Conread position: 3-388
Cow position: chr5:16214891-16214520 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 89

Conread position: 3-408
Cow position: chr5:52040111-52040509 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 64, 197

Conread position: 3-443
Cow position: chr5:5257077-5257521 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 248

Conread position: 3-452
Cow position: chr5:24996011-24996457 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 3-452
Cow position: chr5:32338750-32339208 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 304
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 94

Conread position: 3-502
Cow position: chr5:26377470-26377947 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 69

Conread position: 3-502
Cow position: chr5:35763454-35763007 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 11

Conread position: 3-502
Cow position: chr5:55756203-55756724 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 271

Conread position: 4-143
Cow position: chr5:25598038-25597899 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 60

Conread position: 4-193
Cow position: chr5:44196721-44196912 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 4-333
Cow position: chr5:12434744-12434418 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 50

Conread position: 4-477
Cow position: chr5:62869854-62870293 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 17

Conread position: 4-502
Cow position: chr5:35826807-35826310 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 70

Conread position: 4-502
Cow position: chr5:39937326-39936820 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 154

Conread position: 5-322
Cow position: chr5:43370985-43371305 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 186

Conread position: 5-382
Cow position: chr5:35459088-35459457 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 5-502
Cow position: chr5:28330133-28330612 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 196

Conread position: 5-502
Cow position: chr5:65753068-65752576 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 213

Conread position: 6-499
Cow position: chr5:26990587-26990112 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 52

Conread position: 6-502
Cow position: chr5:45225613-45226112 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 61

Conread position: 6-502
Cow position: chr5:56524369-56523891 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 51

Conread position: 9-357
Cow position: chr5:57419592-57419936 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 61

Conread position: 9-405
Cow position: chr5:39333325-39333728 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 260
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 48

Conread position: 9-489
Cow position: chr5:48867543-48868017 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 316
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 153

Conread position: 9-502
Cow position: chr5:12322607-12323077 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 57

Conread position: 10-348
Cow position: chr5:36624454-36624100 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 270

Conread position: 10-348
Cow position: chr5:64026812-64027141 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 212

Conread position: 10-384
Cow position: chr5:65967530-65967897 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 102, 215

Conread position: 10-431
Cow position: chr5:48154260-48154685 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 291
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 56, 232

Conread position: 10-502
Cow position: chr5:61576750-61576257 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 184

Conread position: 11-252
Cow position: chr5:55795768-55796003 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 53

Conread position: 11-448
Cow position: chr5:36868939-36868516 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 14-461
Cow position: chr5:54350172-54350603 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 43

Conread position: 19-392
Cow position: chr5:45472473-45472092 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 257
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 86, 71

Conread position: 19-409
Cow position: chr5:69461529-69461144 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 211

Conread position: 19-428
Cow position: chr5:11427039-11427451 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 19-459
Cow position: chr5:57074138-57074575 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 198

Conread position: 22-396
Cow position: chr5:6286258-6286604 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 24-429
Cow position: chr5:71495011-71494606 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 200

Conread position: 29-325
Cow position: chr5:60183984-60183691 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 83, 35

Conread position: 44-456
Cow position: chr5:37646379-37646789 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 44-500
Cow position: chr5:26093995-26094450 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 177

Conread position: 51-334
Cow position: chr5:60747118-60747395 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 109

Conread position: 52-433
Cow position: chr5:62142834-62142456 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 53-378
Cow position: chr5:54060434-54060114 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 103

Conread position: 53-461
Cow position: chr5:43929578-43929976 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 119

Conread position: 54-502
Cow position: chr5:16205998-16206425 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 121

Conread position: 55-448
Cow position: chr5:49685121-49685510 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 40

Conread position: 56-502
Cow position: chr5:359784-360228 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 159

Conread position: 66-360
Cow position: chr5:29844425-29844133 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 189
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 23

Conread position: 69-307
Cow position: chr5:50575925-50575693 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 0

Conread position: 69-312
Cow position: chr5:59872938-59873187 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 204

Conread position: 69-324
Cow position: chr5:35126197-35125945 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 149

Conread position: 69-326
Cow position: chr5:58446949-58446692 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 149

Conread position: 69-346
Cow position: chr5:38076341-38076614 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 84

Conread position: 69-347
Cow position: chr5:54767767-54768042 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 20

Conread position: 69-353
Cow position: chr5:14473261-14473551 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 27, 85

Conread position: 69-398
Cow position: chr5:37808521-37808844 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 187

Conread position: 69-398
Cow position: chr5:47323604-47323271 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 108

Conread position: 69-454
Cow position: chr5:36855348-36854977 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 146

Conread position: 69-500
Cow position: chr5:458630-458193 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 69-502
Cow position: chr5:29771670-29771235 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 202

Conread position: 69-502
Cow position: chr5:72564906-72564476 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 72-326
Cow position: chr5:13717432-13717682 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 230, 12

Conread position: 72-347
Cow position: chr5:45273363-45273633 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 21

Conread position: 74-313
Cow position: chr5:55019429-55019195 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 147

Conread position: 74-325
Cow position: chr5:23678566-23678814 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 33

Conread position: 74-334
Cow position: chr5:26476881-26477131 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 108

Conread position: 74-346
Cow position: chr5:53710552-53710824 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 156

Conread position: 74-386
Cow position: chr5:12866691-12866996 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 59

Conread position: 74-387
Cow position: chr5:30949778-30950088 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 146

Conread position: 74-429
Cow position: chr5:18899110-18898773 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 74-452
Cow position: chr5:43992461-43992092 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 141

Conread position: 74-502
Cow position: chr5:4710015-4710424 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 78

Conread position: 75-395
Cow position: chr5:51935325-51935006 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 59

Conread position: 75-462
Cow position: chr5:67244054-67243681 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 88

Conread position: 75-491
Cow position: chr5:58856238-58855826 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 65

Conread position: 75-501
Cow position: chr5:63987310-63987729 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 76-461
Cow position: chr5:52000353-51999977 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 48

Conread position: 76-502
Cow position: chr5:28927458-28927880 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 66

Conread position: 77-425
Cow position: chr5:44049832-44049496 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 86

Conread position: 77-502
Cow position: chr5:44752173-44752595 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 12

Conread position: 78-391
Cow position: chr5:59115513-59115208 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 18

Conread position: 80-422
Cow position: chr5:64758636-64758967 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 69

Conread position: 81-499
Cow position: chr5:15598108-15598514 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 82-501
Cow position: chr5:50533259-50533663 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 94-449
Cow position: chr5:32696706-32697043 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 94-502
Cow position: chr5:2262258-2262657 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 264
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 100

Conread position: 95-502
Cow position: chr5:39094666-39094270 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 101

Conread position: 99-334
Cow position: chr5:49440759-49440991 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 132

Conread position: 99-359
Cow position: chr5:65883660-65883920 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 57

Conread position: 99-395
Cow position: chr5:55929056-55928766 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 122

Conread position: 99-488
Cow position: chr5:31640537-31640160 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 126

Conread position: 99-500
Cow position: chr5:20407566-20407944 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 126

Conread position: 111-431
Cow position: chr5:68264859-68265176 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 104

Conread position: 111-502
Cow position: chr5:61840287-61839905 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 92

Conread position: 117-488
Cow position: chr5:65601550-65601194 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 96

Conread position: 120-448
Cow position: chr5:46122263-46122578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 148-460
Cow position: chr5:2500117-2500422 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 115

Conread position: 157-392
Cow position: chr5:29979929-29980159 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 105

Conread position: 157-434
Cow position: chr5:49361939-49362206 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 58

Conread position: 157-448
Cow position: chr5:12709942-12709657 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 60

Conread position: 157-452
Cow position: chr5:34300972-34300692 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 268, 67

Conread position: 161-502
Cow position: chr5:26790406-26790727 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 141, 50

Conread position: 162-325
Cow position: chr5:60448264-60448105 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 53

Conread position: 162-501
Cow position: chr5:21964335-21963997 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 101, 7

Conread position: 162-502
Cow position: chr5:66815523-66815864 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 56

Conread position: 168-502
Cow position: chr5:23856118-23856446 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 17

Conread position: 170-359
Cow position: chr5:50972570-50972386 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 44

Conread position: 170-366
Cow position: chr5:63865838-63865644 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 170-455
Cow position: chr5:54064816-54064543 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 125, 45

Conread position: 170-502
Cow position: chr5:16185128-16184809 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 170-502
Cow position: chr5:20345202-20344886 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 49

Conread position: 170-502
Cow position: chr5:72286875-72287202 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 97, 45

Conread position: 171-358
Cow position: chr5:51800933-51801113 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 140, 49

Conread position: 171-382
Cow position: chr5:71579215-71579010 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 140, 41

Conread position: 171-448
Cow position: chr5:71505167-71504899 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 171-502
Cow position: chr5:21944437-21944098 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 44

Conread position: 171-502
Cow position: chr5:34916170-34915859 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 171-502
Cow position: chr5:42667348-42667675 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 48

Conread position: 171-502
Cow position: chr5:54404850-54405177 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 43

Conread position: 172-405
Cow position: chr5:17644616-17644842 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 132, 44

Conread position: 173-502
Cow position: chr5:16509137-16508813 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 175-501
Cow position: chr5:62826717-62827037 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 48

Conread position: 178-452
Cow position: chr5:42744818-42744564 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 178-464
Cow position: chr5:32956062-32956335 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 178-502
Cow position: chr5:43474877-43474571 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 186-351
Cow position: chr5:41486713-41486877 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 28

Conread position: 186-453
Cow position: chr5:56134940-56135203 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 37

Conread position: 188-461
Cow position: chr5:34115676-34115420 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 27

Conread position: 188-501
Cow position: chr5:47313497-47313191 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 15

Conread position: 190-502
Cow position: chr5:14420320-14420628 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 192-501
Cow position: chr5:75828720-75829013 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 13

Conread position: 193-429
Cow position: chr5:63185235-63185464 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 196-439
Cow position: chr5:31434280-31434045 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 59

Conread position: 201-348
Cow position: chr5:69047350-69047495 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 31

Conread position: 201-442
Cow position: chr5:18090739-18090504 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 67

Conread position: 201-502
Cow position: chr5:64393170-64392871 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 202-474
Cow position: chr5:6575581-6575837 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 100, 11

Conread position: 202-502
Cow position: chr5:7921391-7921665 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 258, 19

Conread position: 204-453
Cow position: chr5:28324365-28324111 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 58

Conread position: 207-452
Cow position: chr5:66831705-66831947 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 56

Conread position: 209-501
Cow position: chr5:9073727-9074016 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 221, 15

Conread position: 210-428
Cow position: chr5:29212947-29212739 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 42

Conread position: 211-458
Cow position: chr5:30638859-30639089 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 211-502
Cow position: chr5:41531079-41531373 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 212-458
Cow position: chr5:56433806-56433562 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 51

Conread position: 214-413
Cow position: chr5:1678396-1678204 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 50

Conread position: 216-430
Cow position: chr5:47547719-47547928 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 95, 47

Conread position: 217-501
Cow position: chr5:35145345-35145068 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 7

Conread position: 220-401
Cow position: chr5:39242204-39242372 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 220-452
Cow position: chr5:32963637-32963862 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 220-452
Cow position: chr5:45037015-45036787 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 85, 43

Conread position: 220-500
Cow position: chr5:65932934-65933209 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 43

Conread position: 220-502
Cow position: chr5:72150241-72149968 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 43

Conread position: 221-360
Cow position: chr5:19294496-19294631 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 224-398
Cow position: chr5:30561711-30561540 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 39

Conread position: 224-431
Cow position: chr5:57271275-57271478 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 74, 39

Conread position: 224-493
Cow position: chr5:9083330-9083060 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 38

Conread position: 225-423
Cow position: chr5:35449236-35449049 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 225-502
Cow position: chr5:30816708-30816432 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 38

Conread position: 226-431
Cow position: chr5:56518222-56518421 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 228-452
Cow position: chr5:6683369-6683581 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 35

Conread position: 229-502
Cow position: chr5:56467685-56467421 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 35

Conread position: 235-411
Cow position: chr5:50870528-50870349 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 241-502
Cow position: chr5:46103967-46104223 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 209, 22

Conread position: 242-461
Cow position: chr5:48178705-48178918 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 243-479
Cow position: chr5:37366872-37366630 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 191, 21

Conread position: 245-497
Cow position: chr5:63917441-63917685 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 247-502
Cow position: chr5:70101840-70102088 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 50, 17

Conread position: 248-392
Cow position: chr5:45025952-45026091 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 14

Conread position: 253-452
Cow position: chr5:24642765-24642955 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 254-500
Cow position: chr5:56443246-56443000 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 69, 9

Show alignments to all cow chromosomes.