Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 1-243 |
| Cow position: | chr16:29031296-29031055 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1-259 |
| Cow position: | chr16:42741424-42741166 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 210, 94 |
| Conread position: | 1-365 |
| Cow position: | chr16:18688733-18689082 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 92 |
| Conread position: | 1-477 |
| Cow position: | chr16:15368651-15368164 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 102 |
| Conread position: | 2-545 |
| Cow position: | chr16:49258208-49258734 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 44 |
| Conread position: | 5-542 |
| Cow position: | chr16:28234264-28234777 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 131 |
| Conread position: | 6-540 |
| Cow position: | chr16:28158016-28157482 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 90 |
| Conread position: | 7-427 |
| Cow position: | chr16:25152051-25151630 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 17-545 |
| Cow position: | chr16:25256945-25256425 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 343 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 54-527 |
| Cow position: | chr16:140894-140417 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 54-542 |
| Cow position: | chr16:29676893-29677383 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 57-378 |
| Cow position: | chr16:44086249-44085929 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 182 |
| Conread position: | 57-528 |
| Cow position: | chr16:4790510-4790978 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 75-542 |
| Cow position: | chr16:16228752-16228280 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 93-542 |
| Cow position: | chr16:36279497-36279048 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 297 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 119, 96 |
| Conread position: | 100-437 |
| Cow position: | chr16:15803969-15803631 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 113, 68 |
| Conread position: | 100-542 |
| Cow position: | chr16:19714506-19714952 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 105-541 |
| Cow position: | chr16:6551995-6552438 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 134 |
| Conread position: | 109-546 |
| Cow position: | chr16:32934162-32933716 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 126-335 |
| Cow position: | chr16:16686996-16686785 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 133-415 |
| Cow position: | chr16:9928212-9927928 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 81, 109 |
| Conread position: | 147-546 |
| Cow position: | chr16:5886995-5886601 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 160-449 |
| Cow position: | chr16:49956919-49957208 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 180-542 |
| Cow position: | chr16:42052090-42052450 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 190-545 |
| Cow position: | chr16:28876502-28876148 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 239-545 |
| Cow position: | chr16:42107075-42106766 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 273-545 |
| Cow position: | chr16:29030760-29030487 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 203 |
| Conread position: | 348-545 |
| Cow position: | chr16:42741770-42741965 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 48 |
Show alignments to all cow chromosomes.