Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 5-542 |
| Cow position: | chr2:6877112-6876592 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 5-545 |
| Cow position: | chr2:41148677-41148156 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 7-437 |
| Cow position: | chr2:28644559-28644990 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 207, 63 |
| Conread position: | 7-545 |
| Cow position: | chr2:24394500-24395061 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 12-504 |
| Cow position: | chr2:14559786-14559306 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 149 |
| Conread position: | 35-542 |
| Cow position: | chr2:6878806-6878291 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 103 |
| Conread position: | 41-542 |
| Cow position: | chr2:49597383-49596886 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 53-542 |
| Cow position: | chr2:44166871-44167361 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 328 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 54-438 |
| Cow position: | chr2:34556647-34557034 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 54-455 |
| Cow position: | chr2:2474225-2473826 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 147, 172 |
| Conread position: | 54-515 |
| Cow position: | chr2:85359474-85359937 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 306 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 34 |
| Conread position: | 54-520 |
| Cow position: | chr2:2103551-2104022 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 299 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 12, 48 |
| Conread position: | 54-531 |
| Cow position: | chr2:16078972-16079447 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 54-541 |
| Cow position: | chr2:11970567-11971049 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 54-542 |
| Cow position: | chr2:52654599-52654110 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 54-542 |
| Cow position: | chr2:82164763-82164274 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 322 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 56-477 |
| Cow position: | chr2:80495136-80494710 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 57-542 |
| Cow position: | chr2:40244481-40243996 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 58-546 |
| Cow position: | chr2:15579416-15579919 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 132 |
| Conread position: | 76-480 |
| Cow position: | chr2:36076520-36076918 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 86-545 |
| Cow position: | chr2:7900589-7900125 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 102 |
| Conread position: | 93-438 |
| Cow position: | chr2:84096553-84096208 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 93-545 |
| Cow position: | chr2:46945126-46944669 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 133 |
| Conread position: | 94-542 |
| Cow position: | chr2:52155418-52155876 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 143 |
| Conread position: | 102-545 |
| Cow position: | chr2:36563025-36562571 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 102-545 |
| Cow position: | chr2:52629722-52630163 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 135 |
| Conread position: | 105-515 |
| Cow position: | chr2:16284524-16284100 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 135 |
| Conread position: | 108-358 |
| Cow position: | chr2:39853695-39853446 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 108-546 |
| Cow position: | chr2:32460841-32461287 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 133 |
| Conread position: | 118-541 |
| Cow position: | chr2:1491839-1492261 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 62 |
| Conread position: | 130-542 |
| Cow position: | chr2:10844787-10845201 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 140-545 |
| Cow position: | chr2:11728662-11728256 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 182-542 |
| Cow position: | chr2:45922655-45923024 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 206-545 |
| Cow position: | chr2:5897460-5897119 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 210-446 |
| Cow position: | chr2:203719-203957 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 210-545 |
| Cow position: | chr2:54650943-54651284 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 231-535 |
| Cow position: | chr2:25243353-25243042 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 241-542 |
| Cow position: | chr2:63294355-63294662 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 246-532 |
| Cow position: | chr2:2358248-2358538 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 203 |
| Conread position: | 275-515 |
| Cow position: | chr2:28622253-28622494 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 276-545 |
| Cow position: | chr2:54693208-54692940 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 123 |
Show alignments to all cow chromosomes.