Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 1-378 |
| Cow position: | chr21:358090-357729 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 1-414 |
| Cow position: | chr21:13162300-13161913 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-414 |
| Cow position: | chr21:15585711-15586097 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-526 |
| Cow position: | chr21:2542623-2543154 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 1-542 |
| Cow position: | chr21:9891017-9890500 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 103 |
| Conread position: | 1-546 |
| Cow position: | chr21:3983487-3982933 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 73 |
| Conread position: | 2-542 |
| Cow position: | chr21:23808943-23808387 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 134 |
| Conread position: | 5-326 |
| Cow position: | chr21:18821027-18821348 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 18-417 |
| Cow position: | chr21:13010605-13010214 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 56 |
| Conread position: | 18-542 |
| Cow position: | chr21:27561075-27560563 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 177 |
| Conread position: | 26-540 |
| Cow position: | chr21:9869775-9869262 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 337 |
| Conread position: | 38-515 |
| Cow position: | chr21:2789629-2790105 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 54-542 |
| Cow position: | chr21:2530866-2531352 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 31 |
| Conread position: | 55-528 |
| Cow position: | chr21:18284610-18284133 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 56-542 |
| Cow position: | chr21:3425767-3425273 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 56-545 |
| Cow position: | chr21:3799128-3799626 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 183 |
| Conread position: | 59-542 |
| Cow position: | chr21:4076110-4075618 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 77-520 |
| Cow position: | chr21:35595642-35595189 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 93-542 |
| Cow position: | chr21:13124748-13125194 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 99 |
| Conread position: | 94-437 |
| Cow position: | chr21:3357578-3357924 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 118, 131 |
| Conread position: | 102-526 |
| Cow position: | chr21:29083283-29082853 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 87 |
| Conread position: | 105-520 |
| Cow position: | chr21:28873565-28873139 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 108-455 |
| Cow position: | chr21:2718752-2719099 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 125-545 |
| Cow position: | chr21:44286028-44285613 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 140-521 |
| Cow position: | chr21:2708297-2707921 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 159-542 |
| Cow position: | chr21:2717597-2717972 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 175-542 |
| Cow position: | chr21:4455245-4454871 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 181-448 |
| Cow position: | chr21:20745690-20745962 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 251-542 |
| Cow position: | chr21:34260057-34260348 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 354-542 |
| Cow position: | chr21:12629085-12629279 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 359-542 |
| Cow position: | chr21:18821354-18821540 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 160 |
Show alignments to all cow chromosomes.