Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 1-542 |
| Cow position: | chr3:3053557-3053016 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 78 |
| Conread position: | 1-542 |
| Cow position: | chr3:15055400-15055926 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 73 |
| Conread position: | 1-543 |
| Cow position: | chr3:2910090-2910634 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-545 |
| Cow position: | chr3:3907954-3908510 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 5-452 |
| Cow position: | chr3:24593164-24593614 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 146 |
| Conread position: | 5-545 |
| Cow position: | chr3:52865772-52866302 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 100 |
| Conread position: | 5-546 |
| Cow position: | chr3:63006152-63006701 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 7-334 |
| Cow position: | chr3:58946685-58946372 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 135 |
| Conread position: | 18-512 |
| Cow position: | chr3:60891118-60890613 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 174 |
| Conread position: | 47-545 |
| Cow position: | chr3:2854999-2855497 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 83 |
| Conread position: | 50-541 |
| Cow position: | chr3:6684485-6683978 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 54-409 |
| Cow position: | chr3:77473800-77473440 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 54-541 |
| Cow position: | chr3:208144-208634 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 183 |
| Conread position: | 54-542 |
| Cow position: | chr3:5830762-5831247 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 68-452 |
| Cow position: | chr3:57441734-57441358 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 70-542 |
| Cow position: | chr3:34396990-34397468 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 75-459 |
| Cow position: | chr3:64878836-64878444 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 84-525 |
| Cow position: | chr3:3805465-3805021 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 10 |
| Conread position: | 93-542 |
| Cow position: | chr3:43347983-43348438 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 377 |
| Conread position: | 93-542 |
| Cow position: | chr3:69215873-69216327 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 96-545 |
| Cow position: | chr3:64906771-64906326 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 142 |
| Conread position: | 100-481 |
| Cow position: | chr3:54343482-54343864 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 113, 93 |
| Conread position: | 100-542 |
| Cow position: | chr3:2652089-2651644 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 112, 138 |
| Conread position: | 100-542 |
| Cow position: | chr3:5646383-5646831 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 102-342 |
| Cow position: | chr3:2632903-2632661 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 136 |
| Conread position: | 102-531 |
| Cow position: | chr3:9715792-9715357 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 111, 136 |
| Conread position: | 105-520 |
| Cow position: | chr3:6879273-6879689 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 108-542 |
| Cow position: | chr3:39325654-39325215 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 108-545 |
| Cow position: | chr3:3979205-3978766 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 111-443 |
| Cow position: | chr3:27906572-27906895 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 118-515 |
| Cow position: | chr3:58349686-58349289 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 118-542 |
| Cow position: | chr3:70085039-70085471 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 124-542 |
| Cow position: | chr3:64359428-64359838 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 115 |
| Conread position: | 125-545 |
| Cow position: | chr3:66637007-66636579 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 151-545 |
| Cow position: | chr3:17950396-17950013 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 88 |
| Conread position: | 231-474 |
| Cow position: | chr3:56706306-56706550 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 241-545 |
| Cow position: | chr3:2124372-2124063 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 251-473 |
| Cow position: | chr3:75204419-75204198 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 254-531 |
| Cow position: | chr3:39408959-39408676 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 175 |
| Conread position: | 311-531 |
| Cow position: | chr3:5048380-5048606 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 315-542 |
| Cow position: | chr3:31899469-31899698 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 38 |
Show alignments to all cow chromosomes.