Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 1-545 |
| Cow position: | chr5:46658070-46657525 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 5-226 |
| Cow position: | chr5:61274291-61274512 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 205, 132 |
| Conread position: | 5-520 |
| Cow position: | chr5:41979108-41978602 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 40 |
| Conread position: | 6-545 |
| Cow position: | chr5:31598031-31597493 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 11-542 |
| Cow position: | chr5:29456516-29455977 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 194 |
| Conread position: | 13-542 |
| Cow position: | chr5:41964047-41964569 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 89 |
| Conread position: | 33-518 |
| Cow position: | chr5:56562708-56563178 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 38-528 |
| Cow position: | chr5:18506486-18505996 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 41-542 |
| Cow position: | chr5:28030428-28029919 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 43-546 |
| Cow position: | chr5:12682621-12683104 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 96 |
| Conread position: | 54-542 |
| Cow position: | chr5:34963597-34964094 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 54-542 |
| Cow position: | chr5:41551992-41552479 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 54-545 |
| Cow position: | chr5:48503515-48503024 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 57-542 |
| Cow position: | chr5:52804254-52803762 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 59-528 |
| Cow position: | chr5:27569099-27568625 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 59-542 |
| Cow position: | chr5:45698922-45698437 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 78-541 |
| Cow position: | chr5:49594643-49595111 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 80-541 |
| Cow position: | chr5:6527764-6527301 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 160 |
| Conread position: | 93-450 |
| Cow position: | chr5:47472710-47472351 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 142 |
| Conread position: | 93-479 |
| Cow position: | chr5:73512825-73512450 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 93-542 |
| Cow position: | chr5:24328973-24328519 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 139 |
| Conread position: | 93-542 |
| Cow position: | chr5:26170747-26170295 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 138 |
| Conread position: | 93-545 |
| Cow position: | chr5:73502941-73502483 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 100-535 |
| Cow position: | chr5:51951053-51950614 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 277, 136 |
| Conread position: | 100-541 |
| Cow position: | chr5:27061853-27062298 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 126 |
| Conread position: | 102-438 |
| Cow position: | chr5:63823846-63824178 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 102-545 |
| Cow position: | chr5:13424560-13424118 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 105-427 |
| Cow position: | chr5:28045189-28045515 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 129-541 |
| Cow position: | chr5:27338166-27337758 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 133-542 |
| Cow position: | chr5:32734662-32735080 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 111 |
| Conread position: | 137-446 |
| Cow position: | chr5:1756863-1757169 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 139-542 |
| Cow position: | chr5:9688219-9688628 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 144-526 |
| Cow position: | chr5:50159111-50158728 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 147-542 |
| Cow position: | chr5:27653115-27653514 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 215 |
| Conread position: | 159-542 |
| Cow position: | chr5:47775033-47774645 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 168-541 |
| Cow position: | chr5:39248104-39248483 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 241-542 |
| Cow position: | chr5:29007693-29007386 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 273-542 |
| Cow position: | chr5:61274848-61275115 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 276-477 |
| Cow position: | chr5:23689174-23689379 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 10 |
Show alignments to all cow chromosomes.