Cow genome map
| Conread name: | Pig1-79O09 |
| Conread position: | 1-345 |
| Cow position: | chrX:2537549-2537891 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 100 |
| Conread position: | 1-368 |
| Cow position: | chrX:21585877-21585520 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 62 |
| Conread position: | 1-400 |
| Cow position: | chrX:30144577-30144980 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 48 |
| Conread position: | 1-422 |
| Cow position: | chrX:6284335-6284750 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 159 |
| Conread position: | 1-520 |
| Cow position: | chrX:21791565-21791053 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 94 |
| Conread position: | 1-541 |
| Cow position: | chrX:6361904-6362472 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 189 |
| Conread position: | 1-542 |
| Cow position: | chrX:35015738-35015218 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 46 |
| Conread position: | 1-545 |
| Cow position: | chrX:31034335-31033790 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 143 |
| Conread position: | 1-545 |
| Cow position: | chrX:42450588-42451129 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 239 |
| Conread position: | 13-368 |
| Cow position: | chrX:28552873-28552520 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 160 |
| Conread position: | 38-526 |
| Cow position: | chrX:21633650-21634145 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 199 |
| Conread position: | 50-542 |
| Cow position: | chrX:24137494-24137992 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 177 |
| Conread position: | 54-476 |
| Cow position: | chrX:5405590-5406013 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 54-542 |
| Cow position: | chrX:21599575-21599078 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 54-542 |
| Cow position: | chrX:24274364-24273886 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 320 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 54-542 |
| Cow position: | chrX:26504088-26503592 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 54-542 |
| Cow position: | chrX:28605183-28605672 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 55-545 |
| Cow position: | chrX:11669591-11670099 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 85 |
| Conread position: | 56-528 |
| Cow position: | chrX:5835784-5836263 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 56-542 |
| Cow position: | chrX:8907944-8907464 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 57-541 |
| Cow position: | chrX:36153371-36153852 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 57-542 |
| Cow position: | chrX:22776914-22776434 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 81-542 |
| Cow position: | chrX:35016671-35016204 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 92-531 |
| Cow position: | chrX:6276522-6276959 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 93-528 |
| Cow position: | chrX:26838081-26837645 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 139 |
| Conread position: | 93-545 |
| Cow position: | chrX:25331927-25331475 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 143 |
| Conread position: | 93-545 |
| Cow position: | chrX:27985464-27985917 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 116, 30 |
| Conread position: | 94-531 |
| Cow position: | chrX:30991096-30991537 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 141 |
| Conread position: | 100-438 |
| Cow position: | chrX:23220219-23219880 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 100-542 |
| Cow position: | chrX:6910908-6911358 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 100-542 |
| Cow position: | chrX:26633124-26633567 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 100-545 |
| Cow position: | chrX:30371579-30372020 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 102-531 |
| Cow position: | chrX:21290625-21291057 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 21 |
| Conread position: | 102-542 |
| Cow position: | chrX:13007772-13008217 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 135 |
| Conread position: | 104-542 |
| Cow position: | chrX:24123247-24123691 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 108-443 |
| Cow position: | chrX:26465934-26466267 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 112-541 |
| Cow position: | chrX:35955840-35956284 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 77 |
| Conread position: | 118-528 |
| Cow position: | chrX:39716648-39716225 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 119-529 |
| Cow position: | chrX:21058318-21057901 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 127-542 |
| Cow position: | chrX:30047292-30047710 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 151-545 |
| Cow position: | chrX:13050886-13050486 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 173-541 |
| Cow position: | chrX:29784521-29784890 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 182-545 |
| Cow position: | chrX:17672149-17672519 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 250 |
| Conread position: | 188-545 |
| Cow position: | chrX:36197052-36196697 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 198-531 |
| Cow position: | chrX:20802823-20802487 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 258-545 |
| Cow position: | chrX:28545856-28545564 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 203 |
| Conread position: | 279-515 |
| Cow position: | chrX:26897975-26898217 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.