• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig1-82B13
        

               
Conread position:
               
86-482
               

               
Cow position:
               
chr11:6245602-6245216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr11:17515726-17515371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
282, 235
               

               
Conread position:
               
130-482
               

               
Cow position:
               
chr11:67931255-67931597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
131-369
               

               
Cow position:
               
chr11:49487027-49486783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
139-421
               

               
Cow position:
               
chr11:56311373-56311644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
227, 50
               

               
Conread position:
               
139-459
               

               
Cow position:
               
chr11:64105220-64104913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
139-482
               

               
Cow position:
               
chr11:63998860-63999196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
142-410
               

               
Cow position:
               
chr11:53717563-53717844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
142-494
               

               
Cow position:
               
chr11:48429339-48428987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr11:32782645-32782909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
144-491
               

               
Cow position:
               
chr11:11125888-11125548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
146-481
               

               
Cow position:
               
chr11:34646809-34646486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 20
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr11:63034950-63035278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
150-406
               

               
Cow position:
               
chr11:69417619-69417370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr11:48383746-48383420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
151-367
               

               
Cow position:
               
chr11:74152529-74152748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
151-481
               

               
Cow position:
               
chr11:6643030-6642706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
215, 101
               

               
Conread position:
               
151-495
               

               
Cow position:
               
chr11:261044-261381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
152-470
               

               
Cow position:
               
chr11:67911949-67912247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
153-401
               

               
Cow position:
               
chr11:43914505-43914263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
153-417
               

               
Cow position:
               
chr11:62889674-62889938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
153-435
               

               
Cow position:
               
chr11:17990022-17990301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr11:27248705-27248386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr11:27747130-27746818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr11:29916763-29916425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr11:47310771-47311091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
154-384
               

               
Cow position:
               
chr11:47314214-47314443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
154-472
               

               
Cow position:
               
chr11:48086135-48085819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr11:2084359-2084035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr11:80923112-80923430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
155-398
               

               
Cow position:
               
chr11:25604167-25603924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
155-482
               

               
Cow position:
               
chr11:57874018-57873723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
214, 5
               

               
Conread position:
               
155-482
               

               
Cow position:
               
chr11:65607477-65607797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
157-397
               

               
Cow position:
               
chr11:47784990-47784750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
158-414
               

               
Cow position:
               
chr11:35669757-35669993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
208, 56
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr11:17036324-17036636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
210, 23
               

               
Conread position:
               
158-491
               

               
Cow position:
               
chr11:81167825-81168146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
159-441
               

               
Cow position:
               
chr11:71934740-71935021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
159-465
               

               
Cow position:
               
chr11:7013516-7013833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 224
               

               
Conread position:
               
160-300
               

               
Cow position:
               
chr11:30111821-30111678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
160-367
               

               
Cow position:
               
chr11:40538756-40538557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
160-473
               

               
Cow position:
               
chr11:30370306-30370010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
252, 40
               

               
Conread position:
               
160-478
               

               
Cow position:
               
chr11:64351554-64351897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 309
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr11:67804943-67804648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr11:61454297-61454633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 13
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr11:75479815-75480134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr11:76653228-76652912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
206, 152
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr11:75285552-75285884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
162-373
               

               
Cow position:
               
chr11:80007856-80008068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr11:45276944-45277247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
206, 13
               

               
Conread position:
               
162-482
               

               
Cow position:
               
chr11:49057586-49057296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
164-482
               

               
Cow position:
               
chr11:83398110-83397799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
203, 87
               

               
Conread position:
               
165-482
               

               
Cow position:
               
chr11:20762056-20761740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 179
               

               
Conread position:
               
165-482
               

               
Cow position:
               
chr11:47837523-47837209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
166-445
               

               
Cow position:
               
chr11:42884585-42884855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr11:42016438-42016739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
191, 38
               

               
Conread position:
               
167-373
               

               
Cow position:
               
chr11:36092721-36092917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
167-392
               

               
Cow position:
               
chr11:46884573-46884354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
167-409
               

               
Cow position:
               
chr11:46245658-46245902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
167-414
               

               
Cow position:
               
chr11:3715020-3714784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
167-421
               

               
Cow position:
               
chr11:78820347-78820106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 6
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr11:62964694-62964400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
213, 100
               

               
Conread position:
               
167-475
               

               
Cow position:
               
chr11:1380877-1380575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
203, 82
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr11:2907335-2907625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr11:38236444-38236137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
199, 8
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr11:52380675-52380980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr11:77750562-77750878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
167-491
               

               
Cow position:
               
chr11:25791492-25791801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
168-373
               

               
Cow position:
               
chr11:80370313-80370114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
195, 103
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr11:59916368-59916140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 224
               

               
Conread position:
               
168-382
               

               
Cow position:
               
chr11:48315200-48315406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
198, 81
               

               
Conread position:
               
168-382
               

               
Cow position:
               
chr11:49396325-49396535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
168-384
               

               
Cow position:
               
chr11:52415649-52415424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 192
               

               
Conread position:
               
168-402
               

               
Cow position:
               
chr11:17638321-17638564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
168-420
               

               
Cow position:
               
chr11:47883022-47882756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr11:63866461-63866707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
168-429
               

               
Cow position:
               
chr11:11523242-11523523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
168-445
               

               
Cow position:
               
chr11:62754096-62754391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
168-447
               

               
Cow position:
               
chr11:49255610-49255331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
168-455
               

               
Cow position:
               
chr11:70422394-70422671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
168-465
               

               
Cow position:
               
chr11:44223080-44222792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
248, 43
               

               
Conread position:
               
168-466
               

               
Cow position:
               
chr11:1067238-1067533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
168-466
               

               
Cow position:
               
chr11:69168788-69168492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
168-476
               

               
Cow position:
               
chr11:34121409-34121094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
168-476
               

               
Cow position:
               
chr11:55744670-55744371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
168-481
               

               
Cow position:
               
chr11:36182890-36182581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr11:42067063-42066754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 84
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr11:53773881-53773571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
198, 27
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr11:59903100-59902785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
168-485
               

               
Cow position:
               
chr11:32254016-32254327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
168-492
               

               
Cow position:
               
chr11:50472516-50472202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
168-493
               

               
Cow position:
               
chr11:13940386-13940073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
306, 72
               

               
Conread position:
               
168-494
               

               
Cow position:
               
chr11:13863901-13864221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
168-494
               

               
Cow position:
               
chr11:39462818-39462506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
201, 84
               

               
Conread position:
               
169-337
               

               
Cow position:
               
chr11:17465879-17466053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
169-355
               

               
Cow position:
               
chr11:7617009-7617188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
169-379
               

               
Cow position:
               
chr11:49210620-49210828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr11:42191979-42192197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
169-382
               

               
Cow position:
               
chr11:64781286-64781077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
194, 81
               

               
Conread position:
               
169-383
               

               
Cow position:
               
chr11:47110452-47110242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
169-384
               

               
Cow position:
               
chr11:15366779-15366984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
169-389
               

               
Cow position:
               
chr11:25968654-25968867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr11:66099658-66099881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
169-403
               

               
Cow position:
               
chr11:30894805-30895034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
198, 83
               

               
Conread position:
               
169-404
               

               
Cow position:
               
chr11:71022197-71021969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
169-406
               

               
Cow position:
               
chr11:66939391-66939626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
169-407
               

               
Cow position:
               
chr11:32260728-32260500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr11:30172497-30172265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr11:77013970-77013740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
169-426
               

               
Cow position:
               
chr11:62230385-62230127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
169-436
               

               
Cow position:
               
chr11:8259275-8259011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
197, 133
               

               
Conread position:
               
169-462
               

               
Cow position:
               
chr11:72871094-72870814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
169-469
               

               
Cow position:
               
chr11:67312984-67312677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
169-473
               

               
Cow position:
               
chr11:35665362-35665660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
169-474
               

               
Cow position:
               
chr11:62620573-62620281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
169-476
               

               
Cow position:
               
chr11:48296226-48295930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
169-476
               

               
Cow position:
               
chr11:70483652-70483959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr11:55053061-55052779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
199, 45
               

               
Conread position:
               
169-478
               

               
Cow position:
               
chr11:31413653-31413351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr11:16315073-16314769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr11:62742450-62742737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
169-480
               

               
Cow position:
               
chr11:55334117-55333807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 248
               

               
Conread position:
               
169-481
               

               
Cow position:
               
chr11:19591800-19592096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:1485663-1485972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
177, 25
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:7874339-7874041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:9464034-9463728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:13500209-13499910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:27913484-27913169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:30476193-30475897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:33348000-33348290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:36058995-36058697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
234, 25
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:36112610-36112316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:41133883-41134171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:48672912-48672607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:59024155-59024460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
116, 87
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:62226207-62225880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 227
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:62239939-62239640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
199, 77
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:66572292-66572607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:69978163-69977871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
199, 42
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:70756672-70756375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:72375467-72375792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 269
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr11:76890240-76889943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
169-486
               

               
Cow position:
               
chr11:55911450-55911745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
199, 22
               

               
Conread position:
               
169-491
               

               
Cow position:
               
chr11:38334720-38334412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
170-280
               

               
Cow position:
               
chr11:70745301-70745412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
170-329
               

               
Cow position:
               
chr11:32586927-32587079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
170-363
               

               
Cow position:
               
chr11:37042171-37041982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
170-373
               

               
Cow position:
               
chr11:10066545-10066348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
199, 24
               

               
Conread position:
               
170-413
               

               
Cow position:
               
chr11:36521077-36520834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
170-465
               

               
Cow position:
               
chr11:21508208-21507914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr11:45742571-45742279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr11:27404874-27405173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
198, 99
               

               
Conread position:
               
170-480
               

               
Cow position:
               
chr11:64009921-64009615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
196, 10
               

               
Conread position:
               
170-481
               

               
Cow position:
               
chr11:30165707-30165406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr11:11647293-11646963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr11:24438023-24438330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
196, 19
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr11:35153624-35153931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr11:46746834-46746521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
171-324
               

               
Cow position:
               
chr11:19788350-19788189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
171-420
               

               
Cow position:
               
chr11:15017254-15017011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
197, 115
               

               
Conread position:
               
171-477
               

               
Cow position:
               
chr11:1625026-1625325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
197, 83
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr11:15772519-15772821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr11:52297026-52297327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr11:41278382-41278187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr11:17195620-17195846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
172-465
               

               
Cow position:
               
chr11:19946616-19946346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
172-480
               

               
Cow position:
               
chr11:40459299-40459006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
172-481
               

               
Cow position:
               
chr11:30494183-30493893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
195, 42
               

               
Conread position:
               
172-481
               

               
Cow position:
               
chr11:33349508-33349801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr11:6202651-6202340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 249
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr11:26143903-26144202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr11:77705943-77705649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 19
               

               
Conread position:
               
173-362
               

               
Cow position:
               
chr11:33369346-33369162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
173-369
               

               
Cow position:
               
chr11:18777399-18777594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr11:71456024-71455823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
173-374
               

               
Cow position:
               
chr11:63640664-63640876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
173-419
               

               
Cow position:
               
chr11:41213245-41212996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
173-477
               

               
Cow position:
               
chr11:35212978-35213268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
195, 16
               

               
Conread position:
               
173-478
               

               
Cow position:
               
chr11:70600634-70600921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
244, 16
               

               
Conread position:
               
173-478
               

               
Cow position:
               
chr11:85723889-85723600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
173-479
               

               
Cow position:
               
chr11:25620196-25620503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
186, 78
               

               
Conread position:
               
173-481
               

               
Cow position:
               
chr11:14470555-14470265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:17227459-17227752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
240, 16
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:20238872-20238565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:30638757-30639048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:49149241-49148933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:52690330-52690628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:67614732-67615035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
194, 16
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:71492670-71492961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr11:80556412-80556114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
195, 79
               

               
Conread position:
               
173-485
               

               
Cow position:
               
chr11:3283234-3282923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
173-493
               

               
Cow position:
               
chr11:31228147-31227849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
193, 34
               

               
Conread position:
               
173-493
               

               
Cow position:
               
chr11:53510302-53510620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
173-494
               

               
Cow position:
               
chr11:8670212-8669889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 125
               

               
Conread position:
               
173-495
               

               
Cow position:
               
chr11:6194583-6194288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
174-482
               

               
Cow position:
               
chr11:258980-259279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
174-482
               

               
Cow position:
               
chr11:83043175-83043470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
192, 7
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr11:26057456-26057638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
175-363
               

               
Cow position:
               
chr11:34430407-34430220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
175-384
               

               
Cow position:
               
chr11:60296930-60296719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr11:12555112-12555323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
175-414
               

               
Cow position:
               
chr11:82730792-82731039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
175-427
               

               
Cow position:
               
chr11:17889535-17889786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
175-434
               

               
Cow position:
               
chr11:29699495-29699762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
106, 207
               

               
Conread position:
               
175-475
               

               
Cow position:
               
chr11:58594195-58594487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 14
               

               
Conread position:
               
175-481
               

               
Cow position:
               
chr11:21893956-21894257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 179
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr11:375652-375348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr11:30708697-30708398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 75
               

               
Conread position:
               
175-485
               

               
Cow position:
               
chr11:31024609-31024917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
191, 133
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr11:6423206-6423520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 75
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr11:7928868-7928710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr11:68326669-68326875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr11:73983799-73984015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
176-393
               

               
Cow position:
               
chr11:2484605-2484812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr11:45350320-45350539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
176-414
               

               
Cow position:
               
chr11:46922696-46922927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
176-417
               

               
Cow position:
               
chr11:37778626-37778875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 81
               

               
Conread position:
               
176-422
               

               
Cow position:
               
chr11:66325916-66326159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
190, 111
               

               
Conread position:
               
176-422
               

               
Cow position:
               
chr11:81300430-81300670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
176-465
               

               
Cow position:
               
chr11:35536765-35536498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:3720446-3720147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
252, 111
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:3726480-3726182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:4732534-4732236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:10095534-10095239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:17321858-17321554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:41293613-41293925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 251
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr11:61526270-61525962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
176-485
               

               
Cow position:
               
chr11:83357586-83357283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
284, 13
               

               
Conread position:
               
176-494
               

               
Cow position:
               
chr11:59862401-59862092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
177-298
               

               
Cow position:
               
chr11:51743312-51743193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
177-373
               

               
Cow position:
               
chr11:79548743-79548938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr11:42786492-42786698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr11:49207901-49207692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
189, 78
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr11:2900523-2900749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
177-403
               

               
Cow position:
               
chr11:34968422-34968644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr11:37918858-37919148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr11:9270548-9270832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr11:17831017-17831327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 253
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr11:66188131-66188429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 41
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr11:67600966-67600676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 10
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr11:68909665-68909956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
239, 12
               

               
Conread position:
               
177-485
               

               
Cow position:
               
chr11:30808407-30808711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
178-336
               

               
Cow position:
               
chr11:84748047-84748203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
178-352
               

               
Cow position:
               
chr11:69421516-69421691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 155
               

               
Conread position:
               
178-390
               

               
Cow position:
               
chr11:29482252-29482453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
188, 35
               

               
Conread position:
               
178-408
               

               
Cow position:
               
chr11:15382306-15382538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
178-409
               

               
Cow position:
               
chr11:58173824-58173589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 175
               

               
Conread position:
               
178-467
               

               
Cow position:
               
chr11:35724159-35723876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
243, 89
               

               
Conread position:
               
178-470
               

               
Cow position:
               
chr11:80564490-80564198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr11:11558357-11558061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr11:27719150-27719429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr11:40818444-40818744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
185, 19
               

               
Conread position:
               
178-484
               

               
Cow position:
               
chr11:58102568-58102884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
178-487
               

               
Cow position:
               
chr11:49872698-49872998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
190, 74
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr11:50073146-50072832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
13, 249
               

               
Conread position:
               
178-495
               

               
Cow position:
               
chr11:40608404-40608715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
178-497
               

               
Cow position:
               
chr11:26845380-26845719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
74, 264
               

               
Conread position:
               
180-352
               

               
Cow position:
               
chr11:86689314-86689146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
180-356
               

               
Cow position:
               
chr11:63475484-63475655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
180-440
               

               
Cow position:
               
chr11:48248011-48248282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 251
               

               
Conread position:
               
180-465
               

               
Cow position:
               
chr11:4652760-4653067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 287
               

               
Conread position:
               
180-465
               

               
Cow position:
               
chr11:18852091-18851815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
181-267
               

               
Cow position:
               
chr11:62244999-62245085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-344
               

               
Cow position:
               
chr11:9691195-9691034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
181-351
               

               
Cow position:
               
chr11:11483507-11483334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
181-353
               

               
Cow position:
               
chr11:43641574-43641407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr11:81175784-81175615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 86
               

               
Conread position:
               
181-361
               

               
Cow position:
               
chr11:30485843-30485664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
181-366
               

               
Cow position:
               
chr11:77208273-77208082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
181-372
               

               
Cow position:
               
chr11:23278777-23278963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
181-397
               

               
Cow position:
               
chr11:79466408-79466187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
181-399
               

               
Cow position:
               
chr11:63165465-63165673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 66
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr11:8437504-8437724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
181-406
               

               
Cow position:
               
chr11:3896512-3896732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
181-420
               

               
Cow position:
               
chr11:18924933-18924698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
181-420
               

               
Cow position:
               
chr11:30964529-30964299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
186, 105
               

               
Conread position:
               
181-442
               

               
Cow position:
               
chr11:17721615-17721872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
187, 92
               

               
Conread position:
               
181-460
               

               
Cow position:
               
chr11:22747122-22747414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 198
               

               
Conread position:
               
181-464
               

               
Cow position:
               
chr11:32398827-32398548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 82
               

               
Conread position:
               
181-465
               

               
Cow position:
               
chr11:42183225-42182951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
181-465
               

               
Cow position:
               
chr11:70978549-70978820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
181-476
               

               
Cow position:
               
chr11:6633912-6633605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 276
               

               
Conread position:
               
181-478
               

               
Cow position:
               
chr11:43360601-43360885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 73
               

               
Conread position:
               
181-478
               

               
Cow position:
               
chr11:80412823-80413114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 71
               

               
Conread position:
               
181-479
               

               
Cow position:
               
chr11:70206501-70206219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
181-481
               

               
Cow position:
               
chr11:65826568-65826847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 33
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:4207497-4207206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:8544834-8545119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:21421752-21422041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:29659745-29659456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
182, 35
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:36286890-36286590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr11:46580534-46580249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
181-485
               

               
Cow position:
               
chr11:18508842-18509126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
181-491
               

               
Cow position:
               
chr11:17859967-17860268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
116, 130
               

               
Conread position:
               
181-494
               

               
Cow position:
               
chr11:39060419-39060718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
181-495
               

               
Cow position:
               
chr11:65762399-65762718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr11:71192157-71191996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
182-359
               

               
Cow position:
               
chr11:54872576-54872745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
182-412
               

               
Cow position:
               
chr11:46427222-46427447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
182-442
               

               
Cow position:
               
chr11:4636990-4637241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
182-456
               

               
Cow position:
               
chr11:29677391-29677115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
182-461
               

               
Cow position:
               
chr11:29308767-29308489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
184, 99
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr11:83323762-83323470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
105, 233
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr11:27907955-27907687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr11:74316891-74316606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr11:83032862-83032577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
182-493
               

               
Cow position:
               
chr11:18699055-18698759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
182-494
               

               
Cow position:
               
chr11:43430255-43430576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr11:80596539-80596364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
183-364
               

               
Cow position:
               
chr11:434676-434864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
183-367
               

               
Cow position:
               
chr11:46314197-46314017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr11:79666078-79666265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
183-378
               

               
Cow position:
               
chr11:63498947-63499132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
183-383
               

               
Cow position:
               
chr11:41980020-41980215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
183-384
               

               
Cow position:
               
chr11:25614619-25614825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
183-384
               

               
Cow position:
               
chr11:86895556-86895365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
183-388
               

               
Cow position:
               
chr11:30322310-30322507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr11:71345131-71345365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
183-416
               

               
Cow position:
               
chr11:72292745-72292509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
183-423
               

               
Cow position:
               
chr11:15369573-15369336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr11:81763053-81762810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
183-437
               

               
Cow position:
               
chr11:1932304-1932557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
183-452
               

               
Cow position:
               
chr11:7560185-7559919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
172, 91
               

               
Conread position:
               
183-472
               

               
Cow position:
               
chr11:17676191-17676467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
185, 69
               

               
Conread position:
               
183-475
               

               
Cow position:
               
chr11:53817038-53816759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
183-481
               

               
Cow position:
               
chr11:13592923-13592631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
183-481
               

               
Cow position:
               
chr11:65157221-65157516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
183-481
               

               
Cow position:
               
chr11:84385455-84385741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:3740148-3739847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 258
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:16906847-16907150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 187
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:35580445-35580151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:41985864-41986150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:48932405-48932691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:50152629-50152922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:57724638-57724929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr11:68913327-68913036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
183, 66
               

               
Conread position:
               
183-489
               

               
Cow position:
               
chr11:82940446-82940735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
240, 31
               

               
Conread position:
               
183-491
               

               
Cow position:
               
chr11:6233694-6233994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 88
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr11:64029083-64029380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr11:53778804-53778497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 94
               

               
Conread position:
               
184-340
               

               
Cow position:
               
chr11:12768579-12768432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
184-380
               

               
Cow position:
               
chr11:36917582-36917784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
184-400
               

               
Cow position:
               
chr11:20205675-20205879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
184-418
               

               
Cow position:
               
chr11:35351850-35352084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr11:21886013-21885784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
184-430
               

               
Cow position:
               
chr11:32126799-32126548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
184-430
               

               
Cow position:
               
chr11:68883903-68883664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
184-471
               

               
Cow position:
               
chr11:62812769-62813045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
184-472
               

               
Cow position:
               
chr11:23271823-23272099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
184-476
               

               
Cow position:
               
chr11:62789310-62789028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
182, 68
               

               
Conread position:
               
184-477
               

               
Cow position:
               
chr11:5201463-5201747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
184-479
               

               
Cow position:
               
chr11:73573830-73573543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
184-481
               

               
Cow position:
               
chr11:87155699-87155414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
245, 10
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:2917410-2917692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:23407643-23407355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
183, 67
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:30830440-30830722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:41215916-41215636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:44032189-44031896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
184, 30
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:44234557-44234246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:48650169-48649875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 237
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:69307713-69307400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr11:78380886-78381161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
290, 67
               

               
Conread position:
               
184-489
               

               
Cow position:
               
chr11:5217277-5217580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
184-494
               

               
Cow position:
               
chr11:67615069-67615366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
184, 30
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr11:42084491-42084692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:952468-952161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:2874584-2874285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:6399882-6400176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
181, 101
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:30192360-30192068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
183, 36
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:42835771-42836065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr11:45646406-45646701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
187-373
               

               
Cow position:
               
chr11:4436941-4436747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
187-459
               

               
Cow position:
               
chr11:41313482-41313740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
187-461
               

               
Cow position:
               
chr11:18910703-18910964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
187-478
               

               
Cow position:
               
chr11:58990691-58990401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
187-481
               

               
Cow position:
               
chr11:21843959-21844238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 63
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr11:377440-377750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 262
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr11:45872129-45872423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr11:46999166-46998878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 91
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr11:63435702-63435411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr11:68112079-68112371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
188-421
               

               
Cow position:
               
chr11:2639465-2639704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 224
               

               
Conread position:
               
188-469
               

               
Cow position:
               
chr11:4199453-4199179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
178, 64
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr11:19247026-19247302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr11:46747680-46747970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
181, 64
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr11:69076112-69075802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 210
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr11:81134990-81135271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
179, 62
               

               
Conread position:
               
188-485
               

               
Cow position:
               
chr11:48544615-48544327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
188-495
               

               
Cow position:
               
chr11:45435254-45434963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
189-432
               

               
Cow position:
               
chr11:25119758-25119988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 85
               

               
Conread position:
               
189-481
               

               
Cow position:
               
chr11:8988052-8988334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
190-413
               

               
Cow position:
               
chr11:29786316-29786539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
179, 81
               

               
Conread position:
               
191-494
               

               
Cow position:
               
chr11:9221546-9221847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
192-493
               

               
Cow position:
               
chr11:13042973-13043262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
174, 58
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr11:35109366-35109578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr11:60720282-60720461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 79
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr11:71854112-71854323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
171, 54
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr11:34644830-34644605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
195-456
               

               
Cow position:
               
chr11:36920406-36920661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
195-481
               

               
Cow position:
               
chr11:48474881-48474598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
195-482
               

               
Cow position:
               
chr11:5211554-5211845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
196-373
               

               
Cow position:
               
chr11:31326191-31326006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
196-391
               

               
Cow position:
               
chr11:35149573-35149380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr11:34467733-34467530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr11:19606765-19606527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 220
               

               
Conread position:
               
196-480
               

               
Cow position:
               
chr11:28993577-28993836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
170, 56
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr11:53463113-53462837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
197-489
               

               
Cow position:
               
chr11:47772212-47772506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
198-352
               

               
Cow position:
               
chr11:688681-688837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
198-396
               

               
Cow position:
               
chr11:35363666-35363458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
198-416
               

               
Cow position:
               
chr11:5249347-5249570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
198-425
               

               
Cow position:
               
chr11:26632844-26633065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
198-425
               

               
Cow position:
               
chr11:44017153-44016920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
198-431
               

               
Cow position:
               
chr11:39854853-39855073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
224, 54
               

               
Conread position:
               
198-476
               

               
Cow position:
               
chr11:35926740-35927007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
198-482
               

               
Cow position:
               
chr11:34144750-34145021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
200-359
               

               
Cow position:
               
chr11:78672838-78672685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
200-482
               

               
Cow position:
               
chr11:83066659-83066388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
203-482
               

               
Cow position:
               
chr11:31875258-31874986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
169, 82
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr11:82289749-82289486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
206-482
               

               
Cow position:
               
chr11:38670851-38670577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
207-481
               

               
Cow position:
               
chr11:39499515-39499252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
161, 70
               

               
Conread position:
               
213-414
               

               
Cow position:
               
chr11:34136395-34136202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr11:62778616-62778358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
218-432
               

               
Cow position:
               
chr11:84498794-84499009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
218-482
               

               
Cow position:
               
chr11:17493632-17493372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
221-384
               

               
Cow position:
               
chr11:41983012-41983178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr11:63917315-63917557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
221-481
               

               
Cow position:
               
chr11:63909509-63909764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
228-481
               

               
Cow position:
               
chr11:32436477-32436226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
141, 24
               

               
Conread position:
               
239-411
               

               
Cow position:
               
chr11:18608109-18608276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
243-486
               

               
Cow position:
               
chr11:34963203-34962954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr11:33311115-33310858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 202
               

               
Conread position:
               
244-414
               

               
Cow position:
               
chr11:80616368-80616202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
244-453
               

               
Cow position:
               
chr11:64048536-64048328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
244-461
               

               
Cow position:
               
chr11:27565464-27565250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
244-482
               

               
Cow position:
               
chr11:36238911-36238677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr11:71806023-71806250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
247-491
               

               
Cow position:
               
chr11:56518182-56518423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
249-476
               

               
Cow position:
               
chr11:27765277-27765050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
249-482
               

               
Cow position:
               
chr11:61958621-61958851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
250-482
               

               
Cow position:
               
chr11:83033113-83033343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
252-357
               

               
Cow position:
               
chr11:45437403-45437295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
252-417
               

               
Cow position:
               
chr11:29983594-29983761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr11:56290636-56290460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr11:10363260-10363456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
252-460
               

               
Cow position:
               
chr11:15373964-15373763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
252-460
               

               
Cow position:
               
chr11:79018932-79019145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 198
               

               
Conread position:
               
252-481
               

               
Cow position:
               
chr11:59702616-59702381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr11:66518618-66518384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr11:73924436-73924668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
252-494
               

               
Cow position:
               
chr11:70114597-70114348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 201
               

               
Conread position:
               
253-476
               

               
Cow position:
               
chr11:2092461-2092233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
253-478
               

               
Cow position:
               
chr11:35573370-35573591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
253-482
               

               
Cow position:
               
chr11:40573212-40573439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
253-483
               

               
Cow position:
               
chr11:66424760-66424988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr11:56575642-56575865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
254-482
               

               
Cow position:
               
chr11:70609917-70609680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
255-454
               

               
Cow position:
               
chr11:28168303-28168503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr11:70836254-70836478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
255-481
               

               
Cow position:
               
chr11:70745413-70745634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
256-482
               

               
Cow position:
               
chr11:3234196-3233979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr11:28644203-28643978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 189
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr11:35684386-35684601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 151
               

               
Conread position:
               
262-465
               

               
Cow position:
               
chr11:35803251-35803044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
263-409
               

               
Cow position:
               
chr11:58938631-58938781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
263-482
               

               
Cow position:
               
chr11:23232406-23232622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
263-482
               

               
Cow position:
               
chr11:25387181-25386957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
264-424
               

               
Cow position:
               
chr11:62376361-62376524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
265-361
               

               
Cow position:
               
chr11:4411759-4411856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
265-392
               

               
Cow position:
               
chr11:15682868-15682999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
265-397
               

               
Cow position:
               
chr11:84764138-84764012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
265-421
               

               
Cow position:
               
chr11:11469539-11469695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
265-454
               

               
Cow position:
               
chr11:31410766-31410962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
265-474
               

               
Cow position:
               
chr11:42159946-42160159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr11:7590298-7590087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr11:26274851-26275063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr11:39118867-39118646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr11:67747393-67747178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 141
               

               
Conread position:
               
267-465
               

               
Cow position:
               
chr11:7924484-7924679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
267-476
               

               
Cow position:
               
chr11:30925264-30925044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
267-480
               

               
Cow position:
               
chr11:21497629-21497417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
267-480
               

               
Cow position:
               
chr11:48660044-48659827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 181
               

               
Conread position:
               
267-482
               

               
Cow position:
               
chr11:43898248-43898033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr11:3393100-3393329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr11:83230291-83230514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
268-425
               

               
Cow position:
               
chr11:39250079-39249919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr11:42083574-42083374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
268-497
               

               
Cow position:
               
chr11:41288-41053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
269-450
               

               
Cow position:
               
chr11:51195975-51196153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
269-461
               

               
Cow position:
               
chr11:47725004-47724817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
269-481
               

               
Cow position:
               
chr11:1070983-1071198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
269-495
               

               
Cow position:
               
chr11:71341357-71341585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
270-476
               

               
Cow position:
               
chr11:15958410-15958199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
270-482
               

               
Cow position:
               
chr11:42296513-42296724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 154
               

               
Conread position:
               
271-384
               

               
Cow position:
               
chr11:67948640-67948753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
271-483
               

               
Cow position:
               
chr11:249380-249592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
272-493
               

               
Cow position:
               
chr11:68904973-68905193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
273-442
               

               
Cow position:
               
chr11:62150790-62150960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
273-476
               

               
Cow position:
               
chr11:22977771-22977971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
273-477
               

               
Cow position:
               
chr11:15285511-15285718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 180
               

               
Conread position:
               
273-481
               

               
Cow position:
               
chr11:80537586-80537380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr11:36658720-36658927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
275-424
               

               
Cow position:
               
chr11:18447393-18447544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
275-431
               

               
Cow position:
               
chr11:36328936-36329092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
275-456
               

               
Cow position:
               
chr11:3790942-3790752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 165
               

               
Conread position:
               
275-477
               

               
Cow position:
               
chr11:19500690-19500887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
275-481
               

               
Cow position:
               
chr11:77319516-77319307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr11:29960397-29960189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr11:63919952-63920155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
275-492
               

               
Cow position:
               
chr11:31506950-31506731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 211
               

               
Conread position:
               
276-441
               

               
Cow position:
               
chr11:30484017-30483850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
276-482
               

               
Cow position:
               
chr11:8525015-8525217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
277-462
               

               
Cow position:
               
chr11:30879764-30879591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 113
               

               
Conread position:
               
277-476
               

               
Cow position:
               
chr11:30211004-30210806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
277-481
               

               
Cow position:
               
chr11:50778464-50778268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr11:1362368-1362582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr11:11232359-11232561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr11:47899364-47899173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
277-484
               

               
Cow position:
               
chr11:8840651-8840851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
277-488
               

               
Cow position:
               
chr11:17083211-17083423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
277-494
               

               
Cow position:
               
chr11:84228619-84228835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
278-419
               

               
Cow position:
               
chr11:64090000-64090145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr11:80530457-80530262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
279-482
               

               
Cow position:
               
chr11:7395225-7395037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
280-383
               

               
Cow position:
               
chr11:34238477-34238581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
280-481
               

               
Cow position:
               
chr11:51729382-51729183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr11:68206746-68206945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
280-495
               

               
Cow position:
               
chr11:30355154-30354938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
281-382
               

               
Cow position:
               
chr11:25320280-25320178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
281-398
               

               
Cow position:
               
chr11:3248612-3248731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
281-418
               

               
Cow position:
               
chr11:897766-897628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
281-420
               

               
Cow position:
               
chr11:34692946-34692805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
281-423
               

               
Cow position:
               
chr11:62663140-62663282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
281-424
               

               
Cow position:
               
chr11:58927672-58927532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
281-430
               

               
Cow position:
               
chr11:62609697-62609547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
281-440
               

               
Cow position:
               
chr11:34413247-34413407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
281-456
               

               
Cow position:
               
chr11:70826041-70825870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
281-472
               

               
Cow position:
               
chr11:13075717-13075896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
281-473
               

               
Cow position:
               
chr11:64406321-64406128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 171
               

               
Conread position:
               
281-480
               

               
Cow position:
               
chr11:5031681-5031878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
281-480
               

               
Cow position:
               
chr11:31352460-31352673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
281-481
               

               
Cow position:
               
chr11:65767292-65767092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 162
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:2925206-2925394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:6194299-6194099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:14466392-14466595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 155
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:17661176-17660988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:18086253-18086440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:20602319-20602123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:23128447-23128649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:29946819-29947037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:30934509-30934318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:30955095-30954893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:40258317-40258514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:44636661-44636864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:55761960-55761764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:56734722-56734523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 155
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:59873023-59872825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:63847939-63847742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:64867926-64868121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:71390471-71390670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:71501038-71501238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:76114737-76114548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr11:84132064-84132253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
281-491
               

               
Cow position:
               
chr11:21852207-21852418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 167
               

               
Conread position:
               
281-491
               

               
Cow position:
               
chr11:34113360-34113149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
281-495
               

               
Cow position:
               
chr11:24599294-24599510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
281-495
               

               
Cow position:
               
chr11:48272295-48272079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
281-496
               

               
Cow position:
               
chr11:38577684-38577891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
282-462
               

               
Cow position:
               
chr11:33409168-33409347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
282-482
               

               
Cow position:
               
chr11:8428603-8428404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
282-496
               

               
Cow position:
               
chr11:69652690-69652904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
283-491
               

               
Cow position:
               
chr11:44642201-44642401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr11:48306258-48306452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr11:81162344-81162541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 165
               

               
Conread position:
               
286-414
               

               
Cow position:
               
chr11:16801869-16801993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
286-418
               

               
Cow position:
               
chr11:61130579-61130710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
286-420
               

               
Cow position:
               
chr11:41809405-41809540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
286-422
               

               
Cow position:
               
chr11:84977270-84977407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
286-425
               

               
Cow position:
               
chr11:48512251-48512113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
286-427
               

               
Cow position:
               
chr11:16320371-16320231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
286-433
               

               
Cow position:
               
chr11:68173619-68173470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
286-446
               

               
Cow position:
               
chr11:30888192-30888355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
286-454
               

               
Cow position:
               
chr11:32690883-32691052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
286-457
               

               
Cow position:
               
chr11:16342141-16342312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
286-459
               

               
Cow position:
               
chr11:31885810-31885635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
286-465
               

               
Cow position:
               
chr11:35873915-35874095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
286-472
               

               
Cow position:
               
chr11:53147444-53147635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
286-476
               

               
Cow position:
               
chr11:48496505-48496694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
286-476
               

               
Cow position:
               
chr11:69810991-69810800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 160
               

               
Conread position:
               
286-480
               

               
Cow position:
               
chr11:67246873-67246688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
286-481
               

               
Cow position:
               
chr11:40478765-40478955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:1157731-1157539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:2575816-2576010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:3833276-3833459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:7460527-7460721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:17278588-17278770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:18587508-18587714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 169
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:21438296-21438109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:23137966-23138165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:23586726-23586531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:33341057-33341253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
77, 159
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:33345533-33345337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 159
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:36799220-36799408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:42043909-42044096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:44036807-44036619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:49153036-49152845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:49934643-49934843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 163
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:54334416-54334227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:58588432-58588241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:71807479-71807677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:71868515-71868710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 151
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:73353972-73354160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr11:80761290-80761485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 147
               

               
Conread position:
               
286-483
               

               
Cow position:
               
chr11:10213481-10213672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
286-483
               

               
Cow position:
               
chr11:70086420-70086221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
286-486
               

               
Cow position:
               
chr11:82107814-82108002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
286-488
               

               
Cow position:
               
chr11:18785790-18785985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
286-489
               

               
Cow position:
               
chr11:34829698-34829895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 65
               

               
Conread position:
               
286-491
               

               
Cow position:
               
chr11:63469963-63469762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chr11:13061147-13061353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
286-494
               

               
Cow position:
               
chr11:42359207-42358995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
286-495
               

               
Cow position:
               
chr11:33527140-33526935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
286-495
               

               
Cow position:
               
chr11:36987037-36986833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 115
               

               
Conread position:
               
286-495
               

               
Cow position:
               
chr11:45631678-45631880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
286-496
               

               
Cow position:
               
chr11:33753824-33754022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr11:22499279-22499486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr11:69119381-69119165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
287-472
               

               
Cow position:
               
chr11:77546501-77546321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
287-491
               

               
Cow position:
               
chr11:84490413-84490604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
288-476
               

               
Cow position:
               
chr11:60143216-60143405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
289-425
               

               
Cow position:
               
chr11:34106585-34106721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
289-426
               

               
Cow position:
               
chr11:53553300-53553167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
289-428
               

               
Cow position:
               
chr11:7414791-7414928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
289-465
               

               
Cow position:
               
chr11:41603602-41603779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
289-465
               

               
Cow position:
               
chr11:55203377-55203549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
289-465
               

               
Cow position:
               
chr11:70620129-70619952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
289-467
               

               
Cow position:
               
chr11:63687535-63687707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
289-476
               

               
Cow position:
               
chr11:82740594-82740408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr11:5548-5360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr11:47545216-47545024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr11:58400333-58400155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr11:62155723-62155520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr11:70278028-70278214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
290-418
               

               
Cow position:
               
chr11:18915110-18914979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
290-421
               

               
Cow position:
               
chr11:21910543-21910675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
290-436
               

               
Cow position:
               
chr11:53279631-53279777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
290-461
               

               
Cow position:
               
chr11:84890634-84890806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
290-476
               

               
Cow position:
               
chr11:12111375-12111554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
290-476
               

               
Cow position:
               
chr11:77128744-77128552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr11:4430052-4430229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
290-481
               

               
Cow position:
               
chr11:83926126-83925945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:4662963-4663152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:8147815-8148005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:18572884-18572695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:34032116-34032308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:45897965-45898159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:63482347-63482532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr11:86720335-86720519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
290-487
               

               
Cow position:
               
chr11:16842903-16843095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
290-487
               

               
Cow position:
               
chr11:75874671-75874863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
290-491
               

               
Cow position:
               
chr11:76606756-76606563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
290-493
               

               
Cow position:
               
chr11:38639195-38639001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 101
               

               
Conread position:
               
290-495
               

               
Cow position:
               
chr11:55494763-55494561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
290-495
               

               
Cow position:
               
chr11:56654639-56654431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
290-495
               

               
Cow position:
               
chr11:71009207-71009020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
291-482
               

               
Cow position:
               
chr11:64638443-64638635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 155
               

               
Conread position:
               
292-463
               

               
Cow position:
               
chr11:19586541-19586367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
292-476
               

               
Cow position:
               
chr11:13040090-13040264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
292-476
               

               
Cow position:
               
chr11:47004427-47004241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
292-479
               

               
Cow position:
               
chr11:63433978-63434159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
292-482
               

               
Cow position:
               
chr11:52983757-52983570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
292-482
               

               
Cow position:
               
chr11:64905079-64904891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
292-491
               

               
Cow position:
               
chr11:46953029-46952836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr11:16540944-16540744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
293-482
               

               
Cow position:
               
chr11:41272218-41272029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
293-482
               

               
Cow position:
               
chr11:67871523-67871711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
293-490
               

               
Cow position:
               
chr11:77683252-77683053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
293-491
               

               
Cow position:
               
chr11:28395556-28395355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
296-482
               

               
Cow position:
               
chr11:62880554-62880730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
297-442
               

               
Cow position:
               
chr11:71482456-71482311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 117
               

               
Conread position:
               
299-462
               

               
Cow position:
               
chr11:2509231-2509399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
303-482
               

               
Cow position:
               
chr11:69392633-69392451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
303-491
               

               
Cow position:
               
chr11:65444772-65444961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
304-482
               

               
Cow position:
               
chr11:14308708-14308530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
304-482
               

               
Cow position:
               
chr11:75965582-75965756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
305-482
               

               
Cow position:
               
chr11:41175880-41176056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
305-482
               

               
Cow position:
               
chr11:70273375-70273199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr11:49231941-49231769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
306-481
               

               
Cow position:
               
chr11:11044965-11045139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 132
               

               
Conread position:
               
307-422
               

               
Cow position:
               
chr11:65624727-65624843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
308-482
               

               
Cow position:
               
chr11:6835599-6835424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 140
               

               
Conread position:
               
308-494
               

               
Cow position:
               
chr11:18588520-18588707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
309-458
               

               
Cow position:
               
chr11:54218779-54218634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr11:69016039-69015870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
311-481
               

               
Cow position:
               
chr11:24937728-24937558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
311-482
               

               
Cow position:
               
chr11:38874339-38874509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
312-482
               

               
Cow position:
               
chr11:46592527-46592360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
313-488
               

               
Cow position:
               
chr11:61858842-61859016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
313-491
               

               
Cow position:
               
chr11:16261964-16262142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
314-482
               

               
Cow position:
               
chr11:42002888-42003050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
314-482
               

               
Cow position:
               
chr11:48697504-48697343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
314-494
               

               
Cow position:
               
chr11:71168530-71168707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
315-494
               

               
Cow position:
               
chr11:53512140-53511965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
317-482
               

               
Cow position:
               
chr11:18340984-18341147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
322-478
               

               
Cow position:
               
chr11:12368752-12368594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
324-482
               

               
Cow position:
               
chr11:30597043-30596881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
325-482
               

               
Cow position:
               
chr11:26483760-26483608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
325-494
               

               
Cow position:
               
chr11:21399011-21398842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
331-482
               

               
Cow position:
               
chr11:83000487-83000641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
334-484
               

               
Cow position:
               
chr11:2811690-2811838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr11:14094381-14094530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr11:48041994-48042142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr11:57170791-57170936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
339-480
               

               
Cow position:
               
chr11:10076803-10076663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
339-489
               

               
Cow position:
               
chr11:27386304-27386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
339-493
               

               
Cow position:
               
chr11:8339371-8339524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
342-482
               

               
Cow position:
               
chr11:21427961-21428099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
344-485
               

               
Cow position:
               
chr11:85703732-85703597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
348-482
               

               
Cow position:
               
chr11:2309899-2309765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
349-491
               

               
Cow position:
               
chr11:81174909-81174776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
351-493
               

               
Cow position:
               
chr11:24585204-24585060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
352-493
               

               
Cow position:
               
chr11:63499302-63499440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
354-482
               

               
Cow position:
               
chr11:83196517-83196392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
357-482
               

               
Cow position:
               
chr11:38194174-38194048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
357-482
               

               
Cow position:
               
chr11:62979507-62979382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
359-479
               

               
Cow position:
               
chr11:9837086-9837203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
363-494
               

               
Cow position:
               
chr11:65843084-65843214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
365-485
               

               
Cow position:
               
chr11:53130821-53130702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
368-479
               

               
Cow position:
               
chr11:59915927-59915820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
372-491
               

               
Cow position:
               
chr11:30110963-30110847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
374-482
               

               
Cow position:
               
chr11:63516826-63516720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.