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Cow genome map

           
Conread name:
           
Pig1-82B13
        

               
Conread position:
               
90-376
               

               
Cow position:
               
chr4:11186256-11185970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr4:35974652-35974367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
99-389
               

               
Cow position:
               
chr4:61887914-61887631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
103-495
               

               
Cow position:
               
chr4:11332378-11331984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
260, 305
               

               
Conread position:
               
123-365
               

               
Cow position:
               
chr4:23271535-23271301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
130-462
               

               
Cow position:
               
chr4:48486243-48485916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
134-318
               

               
Cow position:
               
chr4:21232440-21232626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
134-373
               

               
Cow position:
               
chr4:44927295-44927528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
134-434
               

               
Cow position:
               
chr4:65173342-65173051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr4:501435-501665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
142-415
               

               
Cow position:
               
chr4:6093832-6094098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
224, 15
               

               
Conread position:
               
144-431
               

               
Cow position:
               
chr4:60363581-60363303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 8
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr4:13919202-13918957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
151-482
               

               
Cow position:
               
chr4:32259617-32259941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
151-482
               

               
Cow position:
               
chr4:34209162-34208839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
152-362
               

               
Cow position:
               
chr4:13194181-13193986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr4:48902390-48902700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
152-465
               

               
Cow position:
               
chr4:37991810-37991518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
283, 13
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr4:12004439-12004129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
152-482
               

               
Cow position:
               
chr4:54191328-54190992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
153-368
               

               
Cow position:
               
chr4:36058268-36058055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
153-370
               

               
Cow position:
               
chr4:51617776-51617985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
153-429
               

               
Cow position:
               
chr4:18952204-18951926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
153-437
               

               
Cow position:
               
chr4:38209751-38210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr4:37343346-37343019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr4:13693456-13693770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
154-482
               

               
Cow position:
               
chr4:46136968-46136655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
155-432
               

               
Cow position:
               
chr4:65753016-65753298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
155-493
               

               
Cow position:
               
chr4:31023671-31023341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
156-421
               

               
Cow position:
               
chr4:1890536-1890803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
156-482
               

               
Cow position:
               
chr4:23526914-23526599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
157-476
               

               
Cow position:
               
chr4:40414403-40414720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
157-482
               

               
Cow position:
               
chr4:11897086-11897394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
159-481
               

               
Cow position:
               
chr4:20147397-20147090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 14
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr4:23846836-23847144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr4:43909981-43909647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr4:46234948-46235136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
161-380
               

               
Cow position:
               
chr4:63261686-63261476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
162-384
               

               
Cow position:
               
chr4:30769245-30769034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
201, 88
               

               
Conread position:
               
162-421
               

               
Cow position:
               
chr4:69169862-69169606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
208, 81
               

               
Conread position:
               
162-480
               

               
Cow position:
               
chr4:68076327-68076623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
162-481
               

               
Cow position:
               
chr4:47731080-47730761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 143
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr4:51631013-51630799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
163-484
               

               
Cow position:
               
chr4:34641513-34641826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 13
               

               
Conread position:
               
164-482
               

               
Cow position:
               
chr4:51851423-51851110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
159, 106
               

               
Conread position:
               
165-425
               

               
Cow position:
               
chr4:38349985-38350243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
165-497
               

               
Cow position:
               
chr4:42423599-42423925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
203, 24
               

               
Conread position:
               
166-381
               

               
Cow position:
               
chr4:45484014-45483800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
166-433
               

               
Cow position:
               
chr4:3341164-3340901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
167-374
               

               
Cow position:
               
chr4:46761821-46761618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
167-455
               

               
Cow position:
               
chr4:47038976-47038697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
199, 27
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr4:11099452-11099765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
167-492
               

               
Cow position:
               
chr4:48322243-48321921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
172, 14
               

               
Conread position:
               
168-368
               

               
Cow position:
               
chr4:28660340-28660535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
168-374
               

               
Cow position:
               
chr4:25802901-25802701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
168-376
               

               
Cow position:
               
chr4:61451425-61451220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr4:2713649-2713858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr4:33870297-33870078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
168-410
               

               
Cow position:
               
chr4:6072845-6073076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
168-419
               

               
Cow position:
               
chr4:54390807-54391054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
198, 85
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr4:7698472-7698228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
201, 84
               

               
Conread position:
               
168-427
               

               
Cow position:
               
chr4:45874256-45874512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
168-434
               

               
Cow position:
               
chr4:19431484-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
168-465
               

               
Cow position:
               
chr4:68391279-68391569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
253, 8
               

               
Conread position:
               
168-477
               

               
Cow position:
               
chr4:20026896-20027197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
168-479
               

               
Cow position:
               
chr4:59277266-59277569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
168-480
               

               
Cow position:
               
chr4:19573496-19573193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr4:11611069-11610780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr4:33096763-33097072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr4:37313375-37313073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr4:52748254-52748554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr4:61388861-61389169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
168-493
               

               
Cow position:
               
chr4:44903491-44903176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
168-495
               

               
Cow position:
               
chr4:34210246-34209923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
169-342
               

               
Cow position:
               
chr4:19496773-19496944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
169-355
               

               
Cow position:
               
chr4:20115804-20115987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
169-367
               

               
Cow position:
               
chr4:22215306-22215494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
169-370
               

               
Cow position:
               
chr4:56853057-56852863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
169-374
               

               
Cow position:
               
chr4:50494985-50494780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
169-374
               

               
Cow position:
               
chr4:56395721-56395522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
169-377
               

               
Cow position:
               
chr4:39010259-39010055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
199, 29
               

               
Conread position:
               
169-383
               

               
Cow position:
               
chr4:41780029-41780239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
169-383
               

               
Cow position:
               
chr4:47230791-47230998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
169-383
               

               
Cow position:
               
chr4:47283806-47284013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
169-384
               

               
Cow position:
               
chr4:38949323-38949538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
169-390
               

               
Cow position:
               
chr4:3519627-3519414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
169-391
               

               
Cow position:
               
chr4:65825617-65825836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
169-406
               

               
Cow position:
               
chr4:27521766-27521530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 81
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr4:2525559-2525800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr4:56746199-56745966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr4:45212979-45213216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
169-410
               

               
Cow position:
               
chr4:19539027-19539264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
169-410
               

               
Cow position:
               
chr4:46560384-46560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
200, 20
               

               
Conread position:
               
169-414
               

               
Cow position:
               
chr4:10851214-10851480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 205
               

               
Conread position:
               
169-414
               

               
Cow position:
               
chr4:46404705-46404935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
199, 45
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr4:32562037-32561795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
197, 25
               

               
Conread position:
               
169-418
               

               
Cow position:
               
chr4:40995939-40995696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
169-421
               

               
Cow position:
               
chr4:31178031-31177788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
169-442
               

               
Cow position:
               
chr4:17851056-17851310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
169-456
               

               
Cow position:
               
chr4:26012619-26012326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
169-456
               

               
Cow position:
               
chr4:26830926-26830632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
169-458
               

               
Cow position:
               
chr4:19199075-19199363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
169-460
               

               
Cow position:
               
chr4:47748620-47748340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 72
               

               
Conread position:
               
169-462
               

               
Cow position:
               
chr4:20142706-20142984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr4:60131435-60131131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
200, 119
               

               
Conread position:
               
169-480
               

               
Cow position:
               
chr4:3912396-3912715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
169-480
               

               
Cow position:
               
chr4:28771864-28772162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
198, 35
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:4084902-4085217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:7964442-7964751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:15439794-15439483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:15635245-15635545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
200, 38
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:19265783-19265479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:35982205-35981897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:37675833-37675519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:38946425-38946112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
198, 83
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:45662312-45662605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:47041211-47041521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:59871685-59871389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
169-488
               

               
Cow position:
               
chr4:62472280-62471978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
199, 7
               

               
Conread position:
               
169-491
               

               
Cow position:
               
chr4:18756644-18756329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr4:45685660-45685359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr4:5577007-5577316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr4:10999501-10999816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr4:18974636-18974320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
169-494
               

               
Cow position:
               
chr4:23646662-23646955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
170-379
               

               
Cow position:
               
chr4:5046929-5047142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
170-390
               

               
Cow position:
               
chr4:42347692-42347477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
187, 80
               

               
Conread position:
               
170-392
               

               
Cow position:
               
chr4:63078431-63078213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
196, 80
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr4:19496704-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 11
               

               
Conread position:
               
170-469
               

               
Cow position:
               
chr4:8182429-8182723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr4:19292918-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
170-478
               

               
Cow position:
               
chr4:44772833-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:4320788-4321096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
181, 98
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:8947628-8947297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 300
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:11187657-11187360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 80
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:22101055-22101356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:22138012-22138327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:28836735-28836439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:31505813-31506128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 99
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr4:34383133-34383439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
171-323
               

               
Cow position:
               
chr4:10962380-10962535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
171-359
               

               
Cow position:
               
chr4:19420550-19420732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
171-403
               

               
Cow position:
               
chr4:60527385-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
195, 60
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr4:18098857-18099087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
171-412
               

               
Cow position:
               
chr4:15462023-15462282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
171-476
               

               
Cow position:
               
chr4:13326746-13327043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr4:12474055-12473751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr4:13284588-13284285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr4:51899224-51898911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr4:5132548-5132356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr4:561835-561628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
172-423
               

               
Cow position:
               
chr4:1645879-1646131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
172-433
               

               
Cow position:
               
chr4:42231830-42232074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
194, 53
               

               
Conread position:
               
172-453
               

               
Cow position:
               
chr4:49800895-49800626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
172-481
               

               
Cow position:
               
chr4:65919822-65919518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr4:41370738-41371037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 106
               

               
Conread position:
               
172-484
               

               
Cow position:
               
chr4:3688132-3687824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
152, 79
               

               
Conread position:
               
173-284
               

               
Cow position:
               
chr4:40409735-40409845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
173-380
               

               
Cow position:
               
chr4:13508037-13508238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
173-384
               

               
Cow position:
               
chr4:56410548-56410344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
173-394
               

               
Cow position:
               
chr4:4647602-4647388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr4:58173118-58172849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
173-454
               

               
Cow position:
               
chr4:68456713-68456987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
173-456
               

               
Cow position:
               
chr4:12442111-12441822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
173-456
               

               
Cow position:
               
chr4:13241841-13241552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr4:65548831-65549106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
247, 16
               

               
Conread position:
               
173-472
               

               
Cow position:
               
chr4:52576561-52576276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
173-480
               

               
Cow position:
               
chr4:27276344-27276639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
173-481
               

               
Cow position:
               
chr4:32693991-32693689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr4:13256269-13255992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr4:13668416-13668720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr4:19584916-19584621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr4:24371658-24371948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
174-383
               

               
Cow position:
               
chr4:47048314-47048120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr4:1236656-1236887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr4:10558736-10558516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
192, 7
               

               
Conread position:
               
174-418
               

               
Cow position:
               
chr4:45909760-45910012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
174-429
               

               
Cow position:
               
chr4:35638706-35638949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
192, 7
               

               
Conread position:
               
174-482
               

               
Cow position:
               
chr4:31004211-31004503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
174-486
               

               
Cow position:
               
chr4:14153316-14152992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
174-497
               

               
Cow position:
               
chr4:16814592-16814282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr4:27632640-27632354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
175-492
               

               
Cow position:
               
chr4:32458656-32458966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
191, 77
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr4:16762518-16762838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
176-280
               

               
Cow position:
               
chr4:40520405-40520300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr4:29236733-29236895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr4:63198165-63198325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
176-344
               

               
Cow position:
               
chr4:20315296-20315473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr4:53169374-53169596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr4:59015779-59015591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr4:46656334-46656121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
176-410
               

               
Cow position:
               
chr4:61346236-61345992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
176-413
               

               
Cow position:
               
chr4:54937294-54937047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-414
               

               
Cow position:
               
chr4:19542349-19542107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 198
               

               
Conread position:
               
176-463
               

               
Cow position:
               
chr4:54871821-54872104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr4:54524131-54524427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:85894-85594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:19700306-19700010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 184
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:22236286-22236576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:27665215-27664916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:30778621-30778925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
202, 74
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:30974533-30974244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
193, 97
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:43894610-43894907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
190, 159
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:46566272-46566571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
192, 40
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:56239665-56239951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr4:62983359-62983649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
176-484
               

               
Cow position:
               
chr4:45636370-45636065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
176-494
               

               
Cow position:
               
chr4:54927231-54927553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr4:30691201-30690998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
177-412
               

               
Cow position:
               
chr4:29317870-29318105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
177-437
               

               
Cow position:
               
chr4:46435532-46435270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
177-465
               

               
Cow position:
               
chr4:13608662-13608382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 101
               

               
Conread position:
               
177-476
               

               
Cow position:
               
chr4:66172595-66172890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr4:12034469-12034177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:13221980-13222279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:13973748-13974065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:37732281-37732579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
190, 75
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:44183922-44184207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
239, 63
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:45582924-45583215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:51769303-51769015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
177-487
               

               
Cow position:
               
chr4:38944062-38944359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 11
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr4:2894235-2893919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr4:47262734-47262427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
189, 17
               

               
Conread position:
               
178-414
               

               
Cow position:
               
chr4:10958944-10958706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr4:13872118-13871858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
178-433
               

               
Cow position:
               
chr4:38358625-38358871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr4:1015268-1014972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
188, 87
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr4:19315810-19316098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 74
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr4:31136952-31136655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr4:43515920-43515630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr4:13344733-13344426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
188, 72
               

               
Conread position:
               
179-359
               

               
Cow position:
               
chr4:38940744-38940918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
179-396
               

               
Cow position:
               
chr4:13995583-13995374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr4:48152175-48152462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
179-494
               

               
Cow position:
               
chr4:26659496-26659191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
179-494
               

               
Cow position:
               
chr4:34631102-34630784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
180-330
               

               
Cow position:
               
chr4:38811611-38811458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
180-360
               

               
Cow position:
               
chr4:17051089-17051262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
180-366
               

               
Cow position:
               
chr4:62794161-62794346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
180-481
               

               
Cow position:
               
chr4:36290817-36290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
180-494
               

               
Cow position:
               
chr4:7704121-7704434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
181-280
               

               
Cow position:
               
chr4:45393774-45393675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-361
               

               
Cow position:
               
chr4:34919080-34919247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
181-383
               

               
Cow position:
               
chr4:479608-479792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
181-401
               

               
Cow position:
               
chr4:58389041-58389259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr4:11871719-11871942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr4:69290547-69290763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
181-405
               

               
Cow position:
               
chr4:43916487-43916266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
181-406
               

               
Cow position:
               
chr4:63596566-63596344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
181-434
               

               
Cow position:
               
chr4:67393290-67393045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
181-462
               

               
Cow position:
               
chr4:1026043-1026311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
181-464
               

               
Cow position:
               
chr4:45706231-45705967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
181-466
               

               
Cow position:
               
chr4:59001944-59002214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 71
               

               
Conread position:
               
181-472
               

               
Cow position:
               
chr4:49629680-49629395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
181-477
               

               
Cow position:
               
chr4:10915638-10915934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
181-480
               

               
Cow position:
               
chr4:21874372-21874080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
181-481
               

               
Cow position:
               
chr4:65265095-65265406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:19119213-19118910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
187, 74
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:19407797-19408096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:38935552-38935260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
187, 33
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:45589401-45589695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:45725058-45724779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
185, 82
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:46061142-46060850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
185, 71
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:58248599-58248305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr4:66547569-66547863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 71
               

               
Conread position:
               
181-493
               

               
Cow position:
               
chr4:22009868-22010173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
235, 55
               

               
Conread position:
               
181-493
               

               
Cow position:
               
chr4:22546649-22546946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
182, 71
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr4:51026544-51026385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
182-361
               

               
Cow position:
               
chr4:48239155-48239329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
182-375
               

               
Cow position:
               
chr4:23809609-23809810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
182-378
               

               
Cow position:
               
chr4:61969537-61969721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
182-413
               

               
Cow position:
               
chr4:63117432-63117669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 192
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chr4:46883474-46883711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
185, 85
               

               
Conread position:
               
182-461
               

               
Cow position:
               
chr4:23190477-23190744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr4:2774916-2774621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr4:34022393-34022683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
185, 66
               

               
Conread position:
               
182-491
               

               
Cow position:
               
chr4:44613198-44612900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
189, 55
               

               
Conread position:
               
183-337
               

               
Cow position:
               
chr4:7816493-7816339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-375
               

               
Cow position:
               
chr4:5250383-5250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr4:46669175-46668983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
183-384
               

               
Cow position:
               
chr4:5790838-5790645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr4:47305273-47305046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
183, 66
               

               
Conread position:
               
183-417
               

               
Cow position:
               
chr4:26959774-26960003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 67
               

               
Conread position:
               
183-420
               

               
Cow position:
               
chr4:27699232-27698992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
104, 72
               

               
Conread position:
               
183-427
               

               
Cow position:
               
chr4:2681521-2681290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
183-427
               

               
Cow position:
               
chr4:12031041-12030797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
183, 104
               

               
Conread position:
               
183-434
               

               
Cow position:
               
chr4:13131674-13131421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
183-465
               

               
Cow position:
               
chr4:33181735-33181455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
183-471
               

               
Cow position:
               
chr4:11900959-11901244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 82
               

               
Conread position:
               
183-478
               

               
Cow position:
               
chr4:15905299-15905006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
183-480
               

               
Cow position:
               
chr4:45076887-45077173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
183, 67
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:202951-203238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:7043625-7043919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
181, 67
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:10732413-10732127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:18095469-18095766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:22073125-22073411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:23450898-23451191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
186, 102
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:34310273-34310546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:49158600-49158880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
184, 69
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:52780037-52779756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:63951972-63952260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
254, 104
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:68430340-68430047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr4:12901345-12901667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr4:19578575-19578290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 31
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr4:30944145-30943982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
184-379
               

               
Cow position:
               
chr4:51083149-51083334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
184-417
               

               
Cow position:
               
chr4:10472406-10472155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
184-423
               

               
Cow position:
               
chr4:16221680-16221918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr4:68590960-68590734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr4:21531449-21531740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr4:25197299-25197590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
184-482
               

               
Cow position:
               
chr4:41867639-41867348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
184-494
               

               
Cow position:
               
chr4:37691120-37691422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
185, 24
               

               
Conread position:
               
185-357
               

               
Cow position:
               
chr4:23925185-23925358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
185-410
               

               
Cow position:
               
chr4:51986384-51986606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
185-417
               

               
Cow position:
               
chr4:44854097-44854324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
185-478
               

               
Cow position:
               
chr4:9444492-9444779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
183, 65
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr4:12127449-12127732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
181, 80
               

               
Conread position:
               
185-482
               

               
Cow position:
               
chr4:45250163-45249879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
185-492
               

               
Cow position:
               
chr4:4318964-4319252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr4:34722696-34722888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
187-422
               

               
Cow position:
               
chr4:14020687-14020461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
187-459
               

               
Cow position:
               
chr4:62370497-62370243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
187-476
               

               
Cow position:
               
chr4:3421812-3421531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
187-478
               

               
Cow position:
               
chr4:19102688-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 65
               

               
Conread position:
               
187-479
               

               
Cow position:
               
chr4:52831827-52832111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
226, 65
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr4:19500900-19501184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 49
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr4:36577423-36577726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr4:45012965-45013260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 185
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr4:46527192-46526901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
187-491
               

               
Cow position:
               
chr4:46494489-46494192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
187-494
               

               
Cow position:
               
chr4:508724-509015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
187-495
               

               
Cow position:
               
chr4:29805181-29805476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
187-495
               

               
Cow position:
               
chr4:64040317-64040010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
188-383
               

               
Cow position:
               
chr4:42373968-42374156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 64
               

               
Conread position:
               
188-397
               

               
Cow position:
               
chr4:41907395-41907596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
188-414
               

               
Cow position:
               
chr4:11496438-11496677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
188-417
               

               
Cow position:
               
chr4:19333570-19333352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
188-476
               

               
Cow position:
               
chr4:17186161-17186441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr4:23444851-23445145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 126
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr4:37915151-37915434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr4:48104378-48104661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 65
               

               
Conread position:
               
188-490
               

               
Cow position:
               
chr4:19709130-19708826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
188-493
               

               
Cow position:
               
chr4:3283267-3283555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
189-361
               

               
Cow position:
               
chr4:61524616-61524455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
189-384
               

               
Cow position:
               
chr4:23984932-23985125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
189-403
               

               
Cow position:
               
chr4:33838617-33838820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 60
               

               
Conread position:
               
189-409
               

               
Cow position:
               
chr4:57156695-57156923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 185
               

               
Conread position:
               
189-474
               

               
Cow position:
               
chr4:61313013-61313298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 232
               

               
Conread position:
               
189-481
               

               
Cow position:
               
chr4:23509777-23509498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
237, 25
               

               
Conread position:
               
189-482
               

               
Cow position:
               
chr4:13590273-13589992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
190-419
               

               
Cow position:
               
chr4:48381575-48381344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr4:24092946-24093236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 97
               

               
Conread position:
               
192-491
               

               
Cow position:
               
chr4:43740714-43740420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 60
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr4:27511730-27511537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
176, 57
               

               
Conread position:
               
193-482
               

               
Cow position:
               
chr4:14500065-14500349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
193-491
               

               
Cow position:
               
chr4:63349293-63349579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
194-419
               

               
Cow position:
               
chr4:34653694-34653905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
174, 55
               

               
Conread position:
               
194-482
               

               
Cow position:
               
chr4:68764700-68764425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
239, 73
               

               
Conread position:
               
195-403
               

               
Cow position:
               
chr4:39847911-39847708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
171, 92
               

               
Conread position:
               
195-481
               

               
Cow position:
               
chr4:45800060-45799779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
171, 105
               

               
Conread position:
               
195-482
               

               
Cow position:
               
chr4:2099812-2099541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
196-377
               

               
Cow position:
               
chr4:30845564-30845377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
196-420
               

               
Cow position:
               
chr4:54478735-54478955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
172, 90
               

               
Conread position:
               
196-427
               

               
Cow position:
               
chr4:28753806-28753586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 18
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr4:4827312-4827031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr4:20843120-20842827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr4:26323923-26323641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr4:45775151-45775436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 85
               

               
Conread position:
               
197-432
               

               
Cow position:
               
chr4:60506454-60506227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
198-495
               

               
Cow position:
               
chr4:54171802-54171519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
171, 54
               

               
Conread position:
               
200-476
               

               
Cow position:
               
chr4:31859443-31859172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
200-477
               

               
Cow position:
               
chr4:39458834-39458542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
201-476
               

               
Cow position:
               
chr4:56498696-56498975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
203-476
               

               
Cow position:
               
chr4:19097463-19097197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 65
               

               
Conread position:
               
203-482
               

               
Cow position:
               
chr4:57584067-57584340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
207-378
               

               
Cow position:
               
chr4:53380859-53380694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
207-399
               

               
Cow position:
               
chr4:53819516-53819702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
207-482
               

               
Cow position:
               
chr4:17052417-17052697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr4:19580588-19580732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
216-492
               

               
Cow position:
               
chr4:45738304-45738583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
218-481
               

               
Cow position:
               
chr4:6653881-6653634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
222-482
               

               
Cow position:
               
chr4:45074212-45073968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
228-482
               

               
Cow position:
               
chr4:46455918-46456156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
231-359
               

               
Cow position:
               
chr4:20276858-20276730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
234-482
               

               
Cow position:
               
chr4:25537691-25537449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
235-482
               

               
Cow position:
               
chr4:36893508-36893261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
235-497
               

               
Cow position:
               
chr4:46476798-46477062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
237-481
               

               
Cow position:
               
chr4:2602374-2602137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr4:36731341-36731103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 205
               

               
Conread position:
               
239-476
               

               
Cow position:
               
chr4:22344881-22345113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
242-497
               

               
Cow position:
               
chr4:53100941-53100682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
243-411
               

               
Cow position:
               
chr4:19304486-19304317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 164
               

               
Conread position:
               
243-482
               

               
Cow position:
               
chr4:33091514-33091284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
244-484
               

               
Cow position:
               
chr4:25888691-25888928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
245-464
               

               
Cow position:
               
chr4:47280269-47280053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr4:37935142-37935380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
249-491
               

               
Cow position:
               
chr4:11380417-11380180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
250-487
               

               
Cow position:
               
chr4:61235069-61235304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
252-462
               

               
Cow position:
               
chr4:65649999-65650205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
5, 120
               

               
Conread position:
               
252-471
               

               
Cow position:
               
chr4:19098607-19098380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 201
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr4:45367872-45367642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr4:10056341-10056117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr4:12903955-12903722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr4:21874935-21874714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr4:44782509-44782277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
252-494
               

               
Cow position:
               
chr4:58880827-58881071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 195
               

               
Conread position:
               
253-374
               

               
Cow position:
               
chr4:2593978-2593855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
253-476
               

               
Cow position:
               
chr4:61757795-61757590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
253-482
               

               
Cow position:
               
chr4:51784314-51784082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr4:65131321-65131512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 186
               

               
Conread position:
               
255-407
               

               
Cow position:
               
chr4:58305775-58305929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr4:41291826-41292007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
255-482
               

               
Cow position:
               
chr4:17084207-17084437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 195
               

               
Conread position:
               
255-482
               

               
Cow position:
               
chr4:34211299-34211070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
255-482
               

               
Cow position:
               
chr4:42921732-42921947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
255-483
               

               
Cow position:
               
chr4:10379245-10379011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 196
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr4:48396666-48396898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
255-495
               

               
Cow position:
               
chr4:8904-9140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
256-477
               

               
Cow position:
               
chr4:44838764-44838986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
256-482
               

               
Cow position:
               
chr4:37502944-37502725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
257-433
               

               
Cow position:
               
chr4:51920674-51920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
258-458
               

               
Cow position:
               
chr4:4277548-4277742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
258-482
               

               
Cow position:
               
chr4:65824536-65824317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
259-409
               

               
Cow position:
               
chr4:19456559-19456713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
260-423
               

               
Cow position:
               
chr4:31761389-31761225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr4:7571534-7571313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
262-481
               

               
Cow position:
               
chr4:54541514-54541737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
263-497
               

               
Cow position:
               
chr4:7808697-7808459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
264-388
               

               
Cow position:
               
chr4:56234087-56233965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
264-482
               

               
Cow position:
               
chr4:16881241-16881459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
265-416
               

               
Cow position:
               
chr4:60442923-60443073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
265-481
               

               
Cow position:
               
chr4:16594202-16593987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
265-495
               

               
Cow position:
               
chr4:54455226-54455451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
266-403
               

               
Cow position:
               
chr4:21506837-21506976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
266-428
               

               
Cow position:
               
chr4:60141401-60141563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
266-482
               

               
Cow position:
               
chr4:13146038-13145823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
267-399
               

               
Cow position:
               
chr4:61268310-61268175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr4:36744698-36744549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
267-482
               

               
Cow position:
               
chr4:48173256-48173043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
268-417
               

               
Cow position:
               
chr4:5727960-5727810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
268-482
               

               
Cow position:
               
chr4:26401073-26400866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
269-409
               

               
Cow position:
               
chr4:46702542-46702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
269-480
               

               
Cow position:
               
chr4:19435373-19435165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
269-480
               

               
Cow position:
               
chr4:63095956-63096168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 173
               

               
Conread position:
               
269-487
               

               
Cow position:
               
chr4:51728196-51727975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 172
               

               
Conread position:
               
271-468
               

               
Cow position:
               
chr4:60719217-60719017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
271-482
               

               
Cow position:
               
chr4:49794774-49794576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
271-491
               

               
Cow position:
               
chr4:25227056-25226846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr4:63471961-63472162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:27530233-27530021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr4:63964879-63965085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
274-473
               

               
Cow position:
               
chr4:49826365-49826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
275-422
               

               
Cow position:
               
chr4:23600279-23600128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
275-430
               

               
Cow position:
               
chr4:3268254-3268410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
275-442
               

               
Cow position:
               
chr4:48422986-48422818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr4:1419338-1419126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr4:20327600-20327807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr4:28839728-28839530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr4:36929418-36929221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
276-476
               

               
Cow position:
               
chr4:24481562-24481760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
276-477
               

               
Cow position:
               
chr4:33970787-33970995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 176
               

               
Conread position:
               
277-442
               

               
Cow position:
               
chr4:42176367-42176529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 132
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr4:34369341-34369548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr4:49089896-49089692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr4:62771813-62772021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 137
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr4:61066875-61066670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
277-495
               

               
Cow position:
               
chr4:46591776-46591557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
13, 171
               

               
Conread position:
               
278-389
               

               
Cow position:
               
chr4:13140989-13141100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
278-414
               

               
Cow position:
               
chr4:15236740-15236605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
278-481
               

               
Cow position:
               
chr4:65950762-65950560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr4:32726332-32726130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr4:56570914-56570711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
278-494
               

               
Cow position:
               
chr4:59378017-59377801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
280-480
               

               
Cow position:
               
chr4:65175039-65175237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr4:11194291-11194088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr4:12591108-12591307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr4:34165874-34166073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr4:46597474-46597282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
280-494
               

               
Cow position:
               
chr4:5460756-5460973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
281-393
               

               
Cow position:
               
chr4:51708168-51708055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
281-411
               

               
Cow position:
               
chr4:34983394-34983524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
281-414
               

               
Cow position:
               
chr4:22196113-22196242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
281-417
               

               
Cow position:
               
chr4:28701463-28701325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
281-426
               

               
Cow position:
               
chr4:38700054-38700201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
281-465
               

               
Cow position:
               
chr4:5963885-5964067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
281-472
               

               
Cow position:
               
chr4:66136503-66136691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
281-475
               

               
Cow position:
               
chr4:19324079-19323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
281-478
               

               
Cow position:
               
chr4:48961383-48961579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
281-478
               

               
Cow position:
               
chr4:55508144-55508337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 114
               

               
Conread position:
               
281-480
               

               
Cow position:
               
chr4:24001864-24002061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
281-481
               

               
Cow position:
               
chr4:34503401-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:3850656-3850456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:4084347-4084544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:12676902-12676709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:17774247-17774450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:22725193-22725008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:27344576-27344771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:33433153-33433360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 170
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:37704369-37704170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:38156983-38157187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:39128642-39128438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:47510487-47510294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 61
               
UCSC Genome Browser

               
Conread position:
               
281-482
               

               
Cow position:
               
chr4:61148718-61148499 (view  custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 182
               
UCSC Genome Browser

               
               
               
Conread position:
281-482

               
               
               
Cow position:
chr4:69543287-69543087 (view  custom track)

               
               
               
Alignm length:
205

               
               
               
Alignm identity:
150

               
               
               
Alignm E-value:
3e-30

               
               
               
Alignm gaps (pig, cow):
7, 141
UCSC Genome Browser

               
               
               
Conread position:
281-484

               
               
               
Cow position:
chr4:9815243-9815447 (view  custom track)

               
               
               
Alignm length:
207

               
               
               
Alignm identity:
149

               
               
               
Alignm E-value:
2e-29

               
               
               
Alignm gaps (pig, cow):
13, 134

               
               
               Conread position:281-484
               
               
               Cow position:chr4:12561143-12560931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):86, 158

               
               
               Conread position:281-485
               
               
               Cow position:chr4:63459118-63459311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):9, 103

               
               
               Conread position:281-488
               
               
               Cow position:chr4:8705097-8704892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):89, 135

               
               
               Conread position:281-491
               
               
               Cow position:chr4:9681411-9681198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):12, 170

               
               
               Conread position:281-494
               
               
               Cow position:chr4:10968286-10968498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):135, 84

               
               
               Conread position:281-495
               
               
               Cow position:chr4:3837380-3837160 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):11, 167

               
               
               Conread position:281-495
               
               
               Cow position:chr4:21391709-21391921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):86, 101

               
               
               Conread position:282-461
               
               
               Cow position:chr4:61478707-61478526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):86, 132

               
               
               Conread position:282-482
               
               
               Cow position:chr4:17111772-17111973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):86, 68

               
               
               Conread position:282-482
               
               
               Cow position:chr4:53208397-53208198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):8, 133

               
               
               Conread position:285-424
               
               
               Cow position:chr4:39609816-39609678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:109
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):83, 40

               
               
               Conread position:285-480
               
               
               Cow position:chr4:12049345-12049151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):82, 69

               
               
               Conread position:286-377
               
               
               Cow position:chr4:54500926-54501017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:93
               
               
               Alignm identity:80
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):77, 58

               
               
               Conread position:286-396
               
               
               Cow position:chr4:8083700-8083812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:113
               
               
               Alignm identity:90
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:286-406
               
               
               Cow position:chr4:65179049-65179173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:286-407
               
               
               Cow position:chr4:32272876-32272997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):80, 68

               
               
               Conread position:286-414
               
               
               Cow position:chr4:50676075-50676201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:108
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):80, 66

               
               
               Conread position:286-421
               
               
               Cow position:chr4:12135828-12135965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:106
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:286-421
               
               
               Cow position:chr4:36517385-36517518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:104
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):130, 80

               
               
               Conread position:286-439
               
               
               Cow position:chr4:61704767-61704919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):37, 76

               
               
               Conread position:286-463
               
               
               Cow position:chr4:34562479-34562302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):95, 85

               
               
               Conread position:286-472
               
               
               Cow position:chr4:53126209-53126030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:286-473
               
               
               Cow position:chr4:61188772-61188957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):80, 14

               
               
               Conread position:286-477
               
               
               Cow position:chr4:68889463-68889654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):82, 159

               
               
               Conread position:286-478
               
               
               Cow position:chr4:45626530-45626714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):77, 28

               
               
               Conread position:286-481
               
               
               Cow position:chr4:20157319-20157512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:148
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):83, 45

               
               
               Conread position:286-482
               
               
               Cow position:chr4:21010-20822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:159
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):80, 131

               
               
               Conread position:286-482
               
               
               Cow position:chr4:27755206-27755396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):80, 133

               
               
               Conread position:286-482
               
               
               Cow position:chr4:41185822-41186005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:286-482
               
               
               Cow position:chr4:41300900-41301086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):69, 16

               
               
               Conread position:286-482
               
               
               Cow position:chr4:44449411-44449600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):82, 66

               
               
               Conread position:286-482
               
               
               Cow position:chr4:45595934-45596126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):68, 60

               
               
               Conread position:286-482
               
               
               Cow position:chr4:47348924-47348731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:158
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:286-482
               
               
               Cow position:chr4:48143936-48143734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):83, 161

               
               
               Conread position:286-482
               
               
               Cow position:chr4:61897437-61897632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):82, 142

               
               
               Conread position:286-484
               
               
               Cow position:chr4:13941554-13941364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:286-485
               
               
               Cow position:chr4:48409171-48409369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:152
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):82, 96

               
               
               Conread position:286-488
               
               
               Cow position:chr4:19430463-19430258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):79, 162

               
               
               Conread position:286-491
               
               
               Cow position:chr4:43865759-43865961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:286-493
               
               
               Cow position:chr4:29384137-29384326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:286-494
               
               
               Cow position:chr4:54920992-54921196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):11, 78

               
               
               Conread position:287-422
               
               
               Cow position:chr4:64029208-64029078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):129, 13

               
               
               Conread position:287-482
               
               
               Cow position:chr4:68387889-68387695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):145, 114

               
               
               Conread position:288-491
               
               
               Cow position:chr4:18107065-18107262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:289-388
               
               
               Cow position:chr4:54650389-54650490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:102
               
               
               Alignm identity:86
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:289-425
               
               
               Cow position:chr4:19256788-19256653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:289-479
               
               
               Cow position:chr4:570887-570703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):77, 125

               
               
               Conread position:289-482
               
               
               Cow position:chr4:34699939-34700134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):48, 66

               
               
               Conread position:289-482
               
               
               Cow position:chr4:38952648-38952456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):79, 136

               
               
               Conread position:290-420
               
               
               Cow position:chr4:56336759-56336630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:101
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):78, 60

               
               
               Conread position:290-478
               
               
               Cow position:chr4:55395855-55395669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):79, 42

               
               
               Conread position:290-480
               
               
               Cow position:chr4:65815614-65815799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):76, 9

               
               
               Conread position:290-482
               
               
               Cow position:chr4:5999101-5999287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):7, 26

               
               
               Conread position:290-482
               
               
               Cow position:chr4:8413029-8413214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):51, 107

               
               
               Conread position:290-482
               
               
               Cow position:chr4:8801596-8801411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):38, 66

               
               
               Conread position:290-482
               
               
               Cow position:chr4:14945156-14944963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):73, 152

               
               
               Conread position:290-482
               
               
               Cow position:chr4:25879484-25879302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:290-482
               
               
               Cow position:chr4:60897189-60897372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:290-489
               
               
               Cow position:chr4:31348095-31348291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):79, 21

               
               
               Conread position:290-491
               
               
               Cow position:chr4:19314107-19313907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):6, 131

               
               
               Conread position:290-491
               
               
               Cow position:chr4:29291608-29291415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:290-492
               
               
               Cow position:chr4:961557-961767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):76, 137

               
               
               Conread position:291-482
               
               
               Cow position:chr4:45644225-45644404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:292-476
               
               
               Cow position:chr4:33395606-33395791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):77, 154

               
               
               Conread position:292-482
               
               
               Cow position:chr4:37344336-37344525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):77, 128

               
               
               Conread position:293-482
               
               
               Cow position:chr4:5913256-5913444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):76, 60

               
               
               Conread position:293-489
               
               
               Cow position:chr4:36945104-36945299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):119, 33

               
               
               Conread position:294-430
               
               
               Cow position:chr4:59008265-59008404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):72, 105

               
               
               Conread position:294-476
               
               
               Cow position:chr4:21257034-21257217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):14, 152

               
               
               Conread position:294-482
               
               
               Cow position:chr4:1405629-1405435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):54, 6

               
               
               Conread position:294-482
               
               
               Cow position:chr4:66111980-66112169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):15, 41

               
               
               Conread position:295-491
               
               
               Cow position:chr4:22860622-22860817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):105, 58

               
               
               Conread position:296-482
               
               
               Cow position:chr4:20139429-20139613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:143
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):73, 43

               
               
               Conread position:296-495
               
               
               Cow position:chr4:41602937-41602741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):73, 150

               
               
               Conread position:299-482
               
               
               Cow position:chr4:65432235-65432052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:145
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):70, 147

               
               
               Conread position:303-451
               
               
               Cow position:chr4:9825640-9825790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):66, 39

               
               
               Conread position:303-472
               
               
               Cow position:chr4:53346408-53346241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):55, 131

               
               
               Conread position:303-482
               
               
               Cow position:chr4:16799105-16799284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):65, 111

               
               
               Conread position:303-492
               
               
               Cow position:chr4:51730031-51729846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):8, 14

               
               
               Conread position:304-476
               
               
               Cow position:chr4:64657218-64657386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):108, 55

               
               
               Conread position:304-482
               
               
               Cow position:chr4:13026384-13026206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):64, 80

               
               
               Conread position:304-482
               
               
               Cow position:chr4:17474519-17474343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):64, 116

               
               
               Conread position:304-491
               
               
               Cow position:chr4:11021571-11021758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):65, 143

               
               
               Conread position:305-482
               
               
               Cow position:chr4:21232795-21232970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):63, 101

               
               
               Conread position:305-494
               
               
               Cow position:chr4:39231446-39231630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):64, 9

               
               
               Conread position:306-460
               
               
               Cow position:chr4:21173923-21173774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):63, 108

               
               
               Conread position:306-482
               
               
               Cow position:chr4:22741338-22741509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):24, 61

               
               
               Conread position:308-481
               
               
               Cow position:chr4:51739641-51739804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:308-482
               
               
               Cow position:chr4:4843168-4843340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):61, 120

               
               
               Conread position:308-493
               
               
               Cow position:chr4:59101436-59101622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):33, 126

               
               
               Conread position:308-494
               
               
               Cow position:chr4:23854256-23854083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):61, 100

               
               
               Conread position:309-495
               
               
               Cow position:chr4:21065111-21064928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):59, 90

               
               
               Conread position:311-465
               
               
               Cow position:chr4:19493628-19493473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):57, 135

               
               
               Conread position:314-476
               
               
               Cow position:chr4:44496443-44496280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):55, 134

               
               
               Conread position:314-482
               
               
               Cow position:chr4:33612289-33612455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):52, 93

               
               
               Conread position:315-478
               
               
               Cow position:chr4:44973703-44973545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):55, 36

               
               
               Conread position:315-482
               
               
               Cow position:chr4:24744337-24744505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):53, 123

               
               
               Conread position:316-482
               
               
               Cow position:chr4:13043331-13043168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):57, 96

               
               
               Conread position:317-482
               
               
               Cow position:chr4:25359665-25359514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):47, 101

               
               
               Conread position:318-482
               
               
               Cow position:chr4:14920055-14919899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:318-482
               
               
               Cow position:chr4:54930356-54930516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):51, 33

               
               
               Conread position:318-494
               
               
               Cow position:chr4:44676259-44676083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):51, 30

               
               
               Conread position:318-497
               
               
               Cow position:chr4:68362987-68362805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):53, 36

               
               
               Conread position:319-421
               
               
               Cow position:chr4:43542406-43542509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:104
               
               
               Alignm identity:86
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:321-490
               
               
               Cow position:chr4:6166240-6166409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):34, 25

               
               
               Conread position:325-473
               
               
               Cow position:chr4:17882560-17882709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):44, 95

               
               
               Conread position:325-481
               
               
               Cow position:chr4:21371450-21371294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):44, 110

               
               
               Conread position:325-482
               
               
               Cow position:chr4:51867051-51866899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:330-482
               
               
               Cow position:chr4:38705719-38705870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):87, 35

               
               
               Conread position:333-465
               
               
               Cow position:chr4:123159-123289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:104
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):37, 23

               
               
               Conread position:334-491
               
               
               Cow position:chr4:58261100-58261258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:123
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):34, 152

               
               
               Conread position:335-482
               
               
               Cow position:chr4:52584308-52584457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):91, 112

               
               
               Conread position:339-459
               
               
               Cow position:chr4:26469668-26469546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):29, 86

               
               
               Conread position:342-480
               
               
               Cow position:chr4:21516961-21517099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):27, 87

               
               
               Conread position:343-482
               
               
               Cow position:chr4:35939966-35940102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):26, 70

               
               
               Conread position:350-480
               
               
               Cow position:chr4:60215420-60215549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:103
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):17, 65

               
               
               Conread position:350-482
               
               
               Cow position:chr4:2537226-2537096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:108
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):19, 70

               
               
               Conread position:354-475
               
               
               Cow position:chr4:22482265-22482145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:99
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):10, 60

               
               
               Conread position:354-482
               
               
               Cow position:chr4:11671482-11671358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:107
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):16, 59

               
               
               Conread position:360-482
               
               
               Cow position:chr4:42253105-42253224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:99
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:365-482
               
               
               Cow position:chr4:26011868-26011756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:96
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:368-482
               
               
               Cow position:chr4:52166836-52166949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:94
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):45, 56

               
               
               Conread position:369-482
               
               
               Cow position:chr4:27687941-27687828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:94
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):57, 78

               
               
               Conread position:374-482
               
               
               Cow position:chr4:48137921-48137815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:109
               
               
               Alignm identity:89
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:379-482
               
               
               Cow position:chr4:26683678-26683579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:104
               
               
               Alignm identity:89
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:387-482
               
               
               Cow position:chr4:5047344-5047432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:96
               
               
               Alignm identity:85
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):26, 0
Show alignments to all cow chromosomes.