Cow genome map

Conread name: Pig1-83L09

Conread position: 1-166
Cow position: chr11:7928879-7928710 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 36

Conread position: 1-188
Cow position: chr11:18777391-18777584 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 36

Conread position: 1-188
Cow position: chr11:46884578-46884388 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 15

Conread position: 1-188
Cow position: chr11:66099659-66099848 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 48

Conread position: 1-191
Cow position: chr11:56115139-56114952 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 36

Conread position: 1-237
Cow position: chr11:78820353-78820111 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 38

Conread position: 1-239
Cow position: chr11:77013970-77013739 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 23

Conread position: 1-241
Cow position: chr11:30172504-30172262 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 39

Conread position: 1-280
Cow position: chr11:27565519-27565250 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 188, 19

Conread position: 1-282
Cow position: chr11:8437487-8437777 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 37

Conread position: 1-304
Cow position: chr11:67312987-67312664 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 35

Conread position: 1-328
Cow position: chr11:62742447-62742766 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 30

Conread position: 1-333
Cow position: chr11:70206516-70206184 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 20

Conread position: 1-334
Cow position: chr11:69978162-69977838 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 12

Conread position: 1-347
Cow position: chr11:32254014-32254371 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 59, 36

Conread position: 1-354
Cow position: chr11:3175867-3175531 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 11

Conread position: 1-357
Cow position: chr11:83926233-83925883 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 36

Conread position: 1-362
Cow position: chr11:45619548-45619182 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 11

Conread position: 1-362
Cow position: chr11:80556420-80556053 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 36

Conread position: 1-369
Cow position: chr11:34646797-34646417 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 1-369
Cow position: chr11:48383730-48383355 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 22

Conread position: 1-369
Cow position: chr11:66572290-66572676 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 113

Conread position: 1-379
Cow position: chr11:36058997-36058620 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 57, 15

Conread position: 1-397
Cow position: chr11:72375464-72375896 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-409
Cow position: chr11:15772513-15772942 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 1-412
Cow position: chr11:39462824-39462395 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 39

Conread position: 1-422
Cow position: chr11:33347996-33348417 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 1-424
Cow position: chr11:62620580-62620150 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 1-429
Cow position: chr11:62239942-62239510 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 1-431
Cow position: chr11:26143896-26144326 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 1-438
Cow position: chr11:2084345-2083899 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 1-445
Cow position: chr11:30638745-30639204 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 86

Conread position: 1-474
Cow position: chr11:3283243-3282773 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 1-474
Cow position: chr11:22931795-22932247 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 36

Conread position: 1-474
Cow position: chr11:77745042-77745539 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 1-475
Cow position: chr11:18484000-18484446 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 1-478
Cow position: chr11:70304275-70303797 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-496
Cow position: chr11:36182893-36182381 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 36

Conread position: 1-502
Cow position: chr11:21893946-21894464 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 1-502
Cow position: chr11:64335033-64334544 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 10

Conread position: 1-509
Cow position: chr11:19891036-19890562 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 1-509
Cow position: chr11:34616460-34615948 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 1-509
Cow position: chr11:40818430-40818965 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 1-509
Cow position: chr11:46329701-46329179 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 1-509
Cow position: chr11:48672914-48672388 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 1-509
Cow position: chr11:49210617-49211153 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-524
Cow position: chr11:8496232-8495702 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 1-524
Cow position: chr11:55744676-55744138 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 2-180
Cow position: chr11:57767387-57767212 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 10

Conread position: 2-188
Cow position: chr11:36104509-36104327 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 34

Conread position: 2-257
Cow position: chr11:1932286-1932556 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 36

Conread position: 2-328
Cow position: chr11:70756678-70756348 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 103

Conread position: 2-344
Cow position: chr11:45742571-45742232 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 28

Conread position: 2-357
Cow position: chr11:11647300-11646907 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 38

Conread position: 2-358
Cow position: chr11:6245518-6245158 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 24

Conread position: 2-360
Cow position: chr11:48296227-48295867 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 2-364
Cow position: chr11:75874569-75874921 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 58

Conread position: 2-374
Cow position: chr11:63433866-63434235 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 19

Conread position: 2-451
Cow position: chr11:29916747-29916275 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 319
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 134

Conread position: 2-452
Cow position: chr11:55053067-55052609 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 2-474
Cow position: chr11:55334120-55333624 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 259

Conread position: 2-505
Cow position: chr11:46746837-46746316 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 56

Conread position: 2-509
Cow position: chr11:62490622-62490113 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 2-509
Cow position: chr11:77758563-77759077 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 3-188
Cow position: chr11:41576673-41576857 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 34

Conread position: 3-243
Cow position: chr11:63866462-63866708 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 27

Conread position: 3-309
Cow position: chr11:39060406-39060715 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 24

Conread position: 3-319
Cow position: chr11:13940390-13940067 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 37

Conread position: 3-333
Cow position: chr11:52690329-52690661 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 3-334
Cow position: chr11:40395640-40395298 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 9

Conread position: 3-364
Cow position: chr11:41133879-41134235 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 35

Conread position: 3-369
Cow position: chr11:38334721-38334343 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 8

Conread position: 3-401
Cow position: chr11:65607491-65607905 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 3-412
Cow position: chr11:14470561-14470144 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 3-440
Cow position: chr11:2907332-2907776 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 3-451
Cow position: chr11:31228154-31227732 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 3-475
Cow position: chr11:65826553-65827020 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 3-508
Cow position: chr11:13500210-13499695 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 34

Conread position: 3-509
Cow position: chr11:31866780-31866279 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 3-509
Cow position: chr11:42016440-42016956 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 4-302
Cow position: chr11:30211083-30210799 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 183, 10

Conread position: 4-350
Cow position: chr11:35212971-35213316 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 34

Conread position: 4-423
Cow position: chr11:25620191-25620629 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 4-501
Cow position: chr11:42835753-42836272 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 5-252
Cow position: chr11:30964541-30964287 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 32

Conread position: 5-342
Cow position: chr11:63998892-63999237 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 32

Conread position: 5-468
Cow position: chr11:258980-259458 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 51

Conread position: 5-499
Cow position: chr11:64044415-64043938 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 5-508
Cow position: chr11:17859955-17860473 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 6-191
Cow position: chr11:74839800-74839622 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 30

Conread position: 6-284
Cow position: chr11:19946618-19946346 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 184, 31

Conread position: 6-328
Cow position: chr11:81167833-81168164 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 33

Conread position: 6-330
Cow position: chr11:62789323-62788993 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 6

Conread position: 6-443
Cow position: chr11:66188124-66188575 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 26

Conread position: 7-184
Cow position: chr11:47784977-47784793 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 31

Conread position: 7-453
Cow position: chr11:27747114-27746653 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 7-469
Cow position: chr11:83043172-83043641 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 7-499
Cow position: chr11:52297027-52297534 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 7-505
Cow position: chr11:41366-40865 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 30

Conread position: 8-188
Cow position: chr11:42206611-42206436 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 29

Conread position: 8-284
Cow position: chr11:42183234-42182951 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 29

Conread position: 8-334
Cow position: chr11:42067059-42066721 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 52, 29

Conread position: 8-341
Cow position: chr11:33824719-33825037 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 117, 29

Conread position: 8-341
Cow position: chr11:49057579-49057256 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 8-350
Cow position: chr11:63435722-63435362 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 106

Conread position: 8-369
Cow position: chr11:19591800-19592169 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 36

Conread position: 8-378
Cow position: chr11:71492669-71493041 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 48

Conread position: 8-435
Cow position: chr11:47899445-47899031 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 8-475
Cow position: chr11:11125861-11125376 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 36

Conread position: 8-487
Cow position: chr11:85723888-85723403 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 7

Conread position: 8-509
Cow position: chr11:80923127-80923656 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 9-188
Cow position: chr11:54872567-54872745 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 26

Conread position: 9-319
Cow position: chr11:27719147-27719447 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 9-451
Cow position: chr11:30764684-30764217 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 49, 14

Conread position: 9-470
Cow position: chr11:44223075-44222617 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 9-501
Cow position: chr11:1625028-1625531 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 9-509
Cow position: chr11:1848971-1849483 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 28

Conread position: 9-509
Cow position: chr11:30192371-30191843 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 10-441
Cow position: chr11:20238869-20238421 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 27

Conread position: 11-243
Cow position: chr11:82730792-82731047 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 47

Conread position: 11-353
Cow position: chr11:6202648-6202288 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 246

Conread position: 11-509
Cow position: chr11:17889535-17890043 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 26

Conread position: 11-512
Cow position: chr11:77705943-77705441 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 27

Conread position: 12-442
Cow position: chr11:35153629-35154080 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 12-509
Cow position: chr11:17321858-17321341 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 12-509
Cow position: chr11:61454313-61454855 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 9

Conread position: 13-412
Cow position: chr11:23586832-23586413 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 14-433
Cow position: chr11:26117550-26117960 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 23

Conread position: 14-468
Cow position: chr11:83323766-83323297 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 321
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 23

Conread position: 14-474
Cow position: chr11:21843947-21844418 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 80

Conread position: 15-188
Cow position: chr11:79466410-79466226 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 21

Conread position: 15-484
Cow position: chr11:75178086-75177596 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 322
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 23

Conread position: 16-180
Cow position: chr11:82732963-82733127 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 76

Conread position: 16-184
Cow position: chr11:81175785-81175615 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 22

Conread position: 16-188
Cow position: chr11:29482254-29482421 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 21

Conread position: 16-195
Cow position: chr11:80296672-80296845 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 21

Conread position: 16-269
Cow position: chr11:51195910-51196153 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 21

Conread position: 16-273
Cow position: chr11:17721615-17721883 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 7

Conread position: 16-322
Cow position: chr11:40608406-40608724 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 21

Conread position: 16-324
Cow position: chr11:49872700-49873017 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 21

Conread position: 16-368
Cow position: chr11:67600965-67600609 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 16-381
Cow position: chr11:70978548-70978921 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 21

Conread position: 16-421
Cow position: chr11:21728102-21728499 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 21

Conread position: 16-438
Cow position: chr11:43525954-43526371 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 75

Conread position: 16-443
Cow position: chr11:49153127-49152700 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 16-464
Cow position: chr11:13042961-13043412 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 16-475
Cow position: chr11:20762039-20761559 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 16-475
Cow position: chr11:41549152-41549616 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 11

Conread position: 16-475
Cow position: chr11:49149233-49148763 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 16-508
Cow position: chr11:65495157-65495647 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 16-509
Cow position: chr11:43360601-43361119 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 16-509
Cow position: chr11:50152626-50153138 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 16-524
Cow position: chr11:4207498-4206963 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 21

Conread position: 17-283
Cow position: chr11:32398827-32398548 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 26

Conread position: 17-297
Cow position: chr11:80412822-80413114 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 21

Conread position: 17-369
Cow position: chr11:9270552-9270902 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 20

Conread position: 18-233
Cow position: chr11:46427222-46427447 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 19

Conread position: 18-319
Cow position: chr11:83032862-83032559 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 18

Conread position: 18-325
Cow position: chr11:67614740-67615059 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 19

Conread position: 18-475
Cow position: chr11:74316891-74316420 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 18-487
Cow position: chr11:18699055-18698574 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 18-509
Cow position: chr11:38639284-38638805 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 19-355
Cow position: chr11:45435259-45434926 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 18

Conread position: 21-248
Cow position: chr11:21886012-21885783 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 16

Conread position: 21-251
Cow position: chr11:39250146-39249918 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 21-281
Cow position: chr11:72871079-72870814 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 16

Conread position: 21-286
Cow position: chr11:62812770-62813043 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 17

Conread position: 21-334
Cow position: chr11:67615071-67615382 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 10

Conread position: 21-369
Cow position: chr11:30830441-30830790 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 16

Conread position: 21-389
Cow position: chr11:41215915-41215544 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 16

Conread position: 21-460
Cow position: chr11:30708687-30708232 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 21-468
Cow position: chr11:6233696-6234158 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 21-475
Cow position: chr11:48932407-48932869 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 16

Conread position: 22-252
Cow position: chr11:72292742-72292494 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 16

Conread position: 22-472
Cow position: chr11:48474894-48474425 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 57

Conread position: 23-240
Cow position: chr11:63485112-63484899 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 14

Conread position: 23-278
Cow position: chr11:41313482-41313740 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 163, 76

Conread position: 23-302
Cow position: chr11:46999166-46998877 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 14

Conread position: 28-307
Cow position: chr11:17036357-17036642 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 28-354
Cow position: chr11:71390399-71390723 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 164, 8

Conread position: 30-244
Cow position: chr11:58927744-58927533 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 155, 26

Conread position: 30-310
Cow position: chr11:66518657-66518375 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 34

Conread position: 30-432
Cow position: chr11:57724650-57725071 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 217

Conread position: 30-449
Cow position: chr11:31526053-31525604 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 402

Conread position: 30-509
Cow position: chr11:43524783-43524302 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 176

Conread position: 34-475
Cow position: chr11:83066664-83066209 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 178

Conread position: 35-273
Cow position: chr11:31410711-31410962 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 66

Conread position: 35-509
Cow position: chr11:68206678-68207168 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 38-271
Cow position: chr11:36920410-36920656 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 38-368
Cow position: chr11:8544848-8545186 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 38-424
Cow position: chr11:11469488-11469868 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 38-453
Cow position: chr11:34121363-34120929 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 38-463
Cow position: chr11:6399896-6400346 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 38-509
Cow position: chr11:84385472-84385957 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 50

Conread position: 39-224
Cow position: chr11:30894836-30895034 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 39-240
Cow position: chr11:35109373-35109584 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 69

Conread position: 39-246
Cow position: chr11:15382328-15382555 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 39-265
Cow position: chr11:57608299-57608527 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 67

Conread position: 39-280
Cow position: chr11:47725056-47724817 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 67

Conread position: 39-281
Cow position: chr11:33409099-33409347 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 56

Conread position: 39-283
Cow position: chr11:35926742-35926995 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 98

Conread position: 39-284
Cow position: chr11:8670184-8669918 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 64

Conread position: 39-288
Cow position: chr11:4199441-4199179 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 218

Conread position: 39-295
Cow position: chr11:42159895-42160161 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 70

Conread position: 39-299
Cow position: chr11:30808430-30808706 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 18

Conread position: 39-305
Cow position: chr11:29659726-29659452 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 46

Conread position: 39-309
Cow position: chr11:47837486-47837201 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 25, 44

Conread position: 39-314
Cow position: chr11:375625-375335 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 25

Conread position: 39-317
Cow position: chr11:3740131-3739831 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 241

Conread position: 39-328
Cow position: chr11:57873975-57873696 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 64

Conread position: 39-330
Cow position: chr11:43008139-43008441 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 164

Conread position: 39-341
Cow position: chr11:23407627-23407315 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 52

Conread position: 39-341
Cow position: chr11:85703856-85703559 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 20, 66

Conread position: 39-347
Cow position: chr11:18852070-18851766 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 82

Conread position: 39-350
Cow position: chr11:5201479-5201805 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 184

Conread position: 39-357
Cow position: chr11:42296460-42296780 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 147, 43

Conread position: 39-369
Cow position: chr11:13592906-13592562 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 233

Conread position: 39-369
Cow position: chr11:23271839-23272176 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 58

Conread position: 39-369
Cow position: chr11:70600660-70600995 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 39-374
Cow position: chr11:37804385-37804734 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 70

Conread position: 39-378
Cow position: chr11:47638857-47639211 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 27

Conread position: 39-391
Cow position: chr11:68913310-68912941 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 49

Conread position: 39-400
Cow position: chr11:36286873-36286488 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 39

Conread position: 39-410
Cow position: chr11:35724137-35723756 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 64

Conread position: 39-411
Cow position: chr11:34144752-34145138 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 39-416
Cow position: chr11:29960459-29960078 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 39-420
Cow position: chr11:77546563-77546188 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 59

Conread position: 39-438
Cow position: chr11:65157238-65157656 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 279

Conread position: 39-444
Cow position: chr11:48544603-48544189 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 39-445
Cow position: chr11:75479855-75480283 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 132

Conread position: 39-446
Cow position: chr11:77319579-77319167 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 39-447
Cow position: chr11:36647494-36647102 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 39-453
Cow position: chr11:19247038-19247460 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 39-462
Cow position: chr11:53773850-53773399 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 64

Conread position: 39-463
Cow position: chr11:17227484-17227914 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 39-466
Cow position: chr11:51687569-51688003 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 84, 21

Conread position: 39-470
Cow position: chr11:34467729-34467315 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 39-475
Cow position: chr11:13040021-13040446 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 150, 18

Conread position: 39-498
Cow position: chr11:73353900-73354362 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 39-502
Cow position: chr11:15467613-15467156 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 39-502
Cow position: chr11:60301810-60302271 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 51

Conread position: 39-509
Cow position: chr11:10095510-10095022 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 39-509
Cow position: chr11:27248655-27248172 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 39-509
Cow position: chr11:38236412-38235917 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 39-509
Cow position: chr11:53778787-53778296 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 337

Conread position: 39-509
Cow position: chr11:68909686-68910173 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 250

Conread position: 39-524
Cow position: chr11:22977715-22978198 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 26

Conread position: 39-524
Cow position: chr11:30165678-30165165 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 229

Conread position: 39-524
Cow position: chr11:70483684-70484198 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 40-240
Cow position: chr11:3714988-3714779 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 40-251
Cow position: chr11:29786327-29786556 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 40-277
Cow position: chr11:62889726-62889974 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 71

Conread position: 40-280
Cow position: chr11:18910718-18910964 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 51

Conread position: 40-341
Cow position: chr11:68112093-68112409 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 74

Conread position: 40-444
Cow position: chr11:45872144-45872573 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 40-476
Cow position: chr11:24602123-24601679 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 40-478
Cow position: chr11:36981731-36981278 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 254

Conread position: 42-239
Cow position: chr11:4225252-4225052 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 56

Conread position: 43-188
Cow position: chr11:72401572-72401718 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 78

Conread position: 43-284
Cow position: chr11:69696784-69697015 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 47

Conread position: 43-335
Cow position: chr11:50472481-50472176 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 68

Conread position: 43-365
Cow position: chr11:28993585-28993899 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 43-366
Cow position: chr11:30209660-30209992 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 66

Conread position: 43-432
Cow position: chr11:82940467-82940860 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 43-463
Cow position: chr11:79728509-79728948 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 21

Conread position: 43-502
Cow position: chr11:23251436-23251917 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 44-169
Cow position: chr11:30597197-30597061 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 44-188
Cow position: chr11:47110418-47110263 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 45-227
Cow position: chr11:6395914-6395722 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 92

Conread position: 45-299
Cow position: chr11:30494149-30493894 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 43

Conread position: 45-460
Cow position: chr11:62663081-62663504 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 52

Conread position: 46-507
Cow position: chr11:39499515-39499058 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 18

Conread position: 46-509
Cow position: chr11:51756457-51755995 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 48-188
Cow position: chr11:67183801-67183662 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 8

Conread position: 48-402
Cow position: chr11:5486167-5485795 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 34

Conread position: 49-184
Cow position: chr11:62081820-62081949 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 49-234
Cow position: chr11:34136393-34136203 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 7

Conread position: 49-271
Cow position: chr11:4637023-4637250 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 6

Conread position: 49-291
Cow position: chr11:17676223-17676467 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 6

Conread position: 49-334
Cow position: chr11:47772230-47772531 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 11

Conread position: 49-450
Cow position: chr11:83398059-83397643 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 7

Conread position: 49-468
Cow position: chr11:17083162-17083577 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 50

Conread position: 49-468
Cow position: chr11:48429270-48428815 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 7

Conread position: 49-488
Cow position: chr11:78380917-78381344 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 7

Conread position: 49-492
Cow position: chr11:87155673-87155209 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 49-502
Cow position: chr11:86925811-86926235 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 7

Conread position: 49-505
Cow position: chr11:41985896-41986360 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 7

Conread position: 49-509
Cow position: chr11:18508877-18509329 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 49-509
Cow position: chr11:64029115-64029576 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 7

Conread position: 50-187
Cow position: chr11:19578095-19577956 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 40

Conread position: 50-247
Cow position: chr11:37425002-37425195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 49

Conread position: 50-335
Cow position: chr11:5211573-5211879 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 52-509
Cow position: chr11:59903042-59902573 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 53-306
Cow position: chr11:18587443-18587719 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 36

Conread position: 53-333
Cow position: chr11:48660079-48659793 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 134, 30

Conread position: 55-190
Cow position: chr11:27688244-27688378 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 32

Conread position: 55-242
Cow position: chr11:35669810-35670000 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 44

Conread position: 55-284
Cow position: chr11:35536731-35536498 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 53

Conread position: 55-318
Cow position: chr11:372558-372818 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 92

Conread position: 55-357
Cow position: chr11:32693338-32693634 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 133, 50

Conread position: 55-358
Cow position: chr11:63917314-63917628 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 113

Conread position: 55-390
Cow position: chr11:63909508-63909853 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 198

Conread position: 55-440
Cow position: chr11:36112565-36112166 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 44

Conread position: 55-474
Cow position: chr11:67804892-67804465 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 95

Conread position: 55-494
Cow position: chr11:46747712-46748174 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 55-509
Cow position: chr11:34113409-34112943 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 52

Conread position: 56-166
Cow position: chr11:18791917-18792030 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 56-188
Cow position: chr11:49207857-49207725 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 121

Conread position: 56-188
Cow position: chr11:60720308-60720441 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 51

Conread position: 56-322
Cow position: chr11:11994566-11994832 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 49

Conread position: 56-327
Cow position: chr11:53510355-53510634 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 51

Conread position: 56-357
Cow position: chr11:17493629-17493316 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 56-358
Cow position: chr11:33286809-33287116 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 234

Conread position: 56-442
Cow position: chr11:3726433-3726033 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 38

Conread position: 56-460
Cow position: chr11:66041418-66041002 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 31

Conread position: 56-475
Cow position: chr11:70459703-70459288 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 133

Conread position: 56-478
Cow position: chr11:8988090-8988519 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 56-478
Cow position: chr11:30721246-30720808 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 201

Conread position: 56-483
Cow position: chr11:81143398-81143855 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 105, 51

Conread position: 56-496
Cow position: chr11:7315003-7315432 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 32

Conread position: 56-499
Cow position: chr11:71868457-71868914 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 56-501
Cow position: chr11:35580407-35579942 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 56-514
Cow position: chr11:40466977-40467449 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 150

Conread position: 57-189
Cow position: chr11:78672816-78672684 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 57-320
Cow position: chr11:26274821-26275083 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 22

Conread position: 57-361
Cow position: chr11:81135024-81135328 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 30

Conread position: 57-369
Cow position: chr11:38670835-38670508 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 64, 50

Conread position: 57-413
Cow position: chr11:81406022-81406381 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 71

Conread position: 57-423
Cow position: chr11:65762439-65762830 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 57-449
Cow position: chr11:2917448-2917837 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 30

Conread position: 57-466
Cow position: chr11:45646448-45646868 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 63

Conread position: 57-474
Cow position: chr11:9221577-9222011 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 51

Conread position: 57-502
Cow position: chr11:8524973-8525419 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 58

Conread position: 57-509
Cow position: chr11:3393069-3393530 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 30

Conread position: 58-291
Cow position: chr11:53816999-53816762 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 190

Conread position: 60-441
Cow position: chr11:18706687-18707065 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 39

Conread position: 61-260
Cow position: chr11:48248067-48248282 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 61-472
Cow position: chr11:18243804-18244225 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 62-465
Cow position: chr11:81138352-81137945 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 45

Conread position: 62-509
Cow position: chr11:59873063-59872606 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 25

Conread position: 63-253
Cow position: chr11:84498804-84499008 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 109

Conread position: 64-406
Cow position: chr11:11558309-11557952 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 40

Conread position: 64-446
Cow position: chr11:32436476-32436075 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 68-495
Cow position: chr11:7924458-7924892 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 70-483
Cow position: chr11:6835667-6835233 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 74-232
Cow position: chr11:18608109-18608276 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 20

Conread position: 78-509
Cow position: chr11:2092457-2092027 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 54

Conread position: 78-509
Cow position: chr11:77750645-77751086 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 80-500
Cow position: chr11:39118875-39118477 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 303
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 87, 27

Conread position: 81-348
Cow position: chr11:7684079-7683819 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 11

Conread position: 81-483
Cow position: chr11:18572925-18572509 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 84-237
Cow position: chr11:30272818-30272974 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 103

Conread position: 84-488
Cow position: chr11:48496475-48496866 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 35

Conread position: 85-284
Cow position: chr11:55203343-55203549 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 41

Conread position: 85-509
Cow position: chr11:17278555-17278981 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 161

Conread position: 87-243
Cow position: chr11:56290630-56290462 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 87-275
Cow position: chr11:70826067-70825870 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 166

Conread position: 87-277
Cow position: chr11:30888161-30888366 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 188

Conread position: 87-279
Cow position: chr11:22747213-22747414 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 35, 7

Conread position: 87-283
Cow position: chr11:82289697-82289486 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 87-316
Cow position: chr11:63919929-63920170 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 166

Conread position: 87-325
Cow position: chr11:64867899-64868145 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 165

Conread position: 87-344
Cow position: chr11:6633829-6633562 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 224

Conread position: 87-362
Cow position: chr11:40478733-40479022 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 161

Conread position: 87-399
Cow position: chr11:61958626-61958959 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 87-408
Cow position: chr11:36238897-36238563 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 157

Conread position: 87-409
Cow position: chr11:17574231-17574540 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 93

Conread position: 87-433
Cow position: chr11:50073050-50072718 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 29

Conread position: 87-444
Cow position: chr11:41427017-41426659 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 117

Conread position: 87-454
Cow position: chr11:34032082-34032461 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 87-461
Cow position: chr11:5789781-5790188 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 87-473
Cow position: chr11:43430337-43430731 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 210

Conread position: 87-474
Cow position: chr11:7590303-7589905 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 18

Conread position: 87-475
Cow position: chr11:44642175-44642572 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 87-475
Cow position: chr11:62226104-62225713 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 192

Conread position: 87-484
Cow position: chr11:56518198-56518608 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 87-499
Cow position: chr11:71168472-71168888 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 171

Conread position: 87-502
Cow position: chr11:34963188-34962749 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 87-504
Cow position: chr11:28644206-28643766 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 326

Conread position: 87-508
Cow position: chr11:73924442-73924878 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 175

Conread position: 87-509
Cow position: chr11:18086229-18086658 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 167

Conread position: 87-509
Cow position: chr11:48272319-48271875 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 397

Conread position: 87-509
Cow position: chr11:48650087-48649635 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 100, 39

Conread position: 87-509
Cow position: chr11:53147414-53147860 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 87-509
Cow position: chr11:54334447-54334012 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 264

Conread position: 87-509
Cow position: chr11:63847963-63847531 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 167

Conread position: 88-318
Cow position: chr11:83033122-83033359 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 57

Conread position: 88-347
Cow position: chr11:69076028-69075756 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 88-369
Cow position: chr11:27765268-27764981 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 208

Conread position: 88-468
Cow position: chr11:23137933-23138340 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 196

Conread position: 88-470
Cow position: chr11:14941493-14941869 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 73

Conread position: 88-471
Cow position: chr11:60470081-60470462 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 103

Conread position: 88-493
Cow position: chr11:1070973-1071398 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 253

Conread position: 88-502
Cow position: chr11:30879787-30879364 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 158

Conread position: 88-524
Cow position: chr11:44575635-44576074 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 37

Conread position: 89-317
Cow position: chr11:14466377-14466610 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 7

Conread position: 89-319
Cow position: chr11:41293701-41293943 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 161

Conread position: 89-330
Cow position: chr11:69307630-69307365 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 89-340
Cow position: chr11:7460501-7460763 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 41

Conread position: 89-367
Cow position: chr11:41175834-41176122 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 46, 169

Conread position: 89-369
Cow position: chr11:30955117-30954824 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 89-422
Cow position: chr11:42043880-42044223 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 47

Conread position: 89-443
Cow position: chr11:77128775-77128415 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 213

Conread position: 89-457
Cow position: chr11:68904963-68905331 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 89-461
Cow position: chr11:83230288-83230657 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 89-476
Cow position: chr11:33753795-33754186 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 51

Conread position: 89-509
Cow position: chr11:17831106-17831553 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 21

Conread position: 89-509
Cow position: chr11:35684383-35684819 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 90-284
Cow position: chr11:35803250-35803044 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 17

Conread position: 90-366
Cow position: chr11:16906935-16907214 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 166

Conread position: 90-369
Cow position: chr11:83687316-83687602 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 170

Conread position: 90-409
Cow position: chr11:82107786-82108107 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 104

Conread position: 90-470
Cow position: chr11:36658708-36659096 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 243

Conread position: 90-499
Cow position: chr11:20602342-20601929 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 90-501
Cow position: chr11:58990607-58990198 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 90-509
Cow position: chr11:42083577-42083163 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 90-509
Cow position: chr11:65409047-65409482 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 27

Conread position: 90-514
Cow position: chr11:21852192-21852609 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 90-526
Cow position: chr11:80530474-80530030 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 91-501
Cow position: chr11:67747394-67746965 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 24

Conread position: 91-502
Cow position: chr11:23232405-23232826 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 163

Conread position: 92-187
Cow position: chr11:34430319-34430225 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 92-279
Cow position: chr11:79018945-79019145 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 92-284
Cow position: chr11:4652859-4653067 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 92-393
Cow position: chr11:26845481-26845779 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 226

Conread position: 92-443
Cow position: chr11:3234189-3233827 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 162

Conread position: 92-453
Cow position: chr11:63482317-63482690 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 92-464
Cow position: chr11:62155752-62155355 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 323

Conread position: 92-509
Cow position: chr11:40792591-40793021 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 215

Conread position: 92-509
Cow position: chr11:44636641-44637081 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 316

Conread position: 93-280
Cow position: chr11:84890611-84890806 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 23

Conread position: 93-354
Cow position: chr11:2575791-2576063 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 180

Conread position: 93-509
Cow position: chr11:70838177-70838623 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 53

Conread position: 94-230
Cow position: chr11:58173736-58173589 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 87

Conread position: 94-283
Cow position: chr11:62778553-62778358 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 127

Conread position: 94-302
Cow position: chr11:7385550-7385330 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 55

Conread position: 94-349
Cow position: chr11:70278001-70278263 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 140

Conread position: 94-365
Cow position: chr11:70086444-70086154 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 94-369
Cow position: chr11:40573224-40573508 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 94-369
Cow position: chr11:47004457-47004176 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 43, 24

Conread position: 94-502
Cow position: chr11:69119406-69118986 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 216

Conread position: 95-368
Cow position: chr11:38577668-38577948 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 149

Conread position: 95-466
Cow position: chr11:34829677-34830057 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 95-476
Cow position: chr11:21497630-21497253 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 152

Conread position: 95-509
Cow position: chr11:62150783-62151204 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 170

Conread position: 96-424
Cow position: chr11:71501024-71501357 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 97-296
Cow position: chr11:4430028-4430229 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 144

Conread position: 97-330
Cow position: chr11:46953056-46952814 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 153

Conread position: 97-502
Cow position: chr11:76606779-76606376 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 97-509
Cow position: chr11:5031668-5032097 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 98-509
Cow position: chr11:15285507-15285938 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 166

Conread position: 99-328
Cow position: chr11:71807460-71807704 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 99-340
Cow position: chr11:86132353-86132599 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 119

Conread position: 99-352
Cow position: chr11:51729393-51729131 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 155

Conread position: 99-471
Cow position: chr11:55761972-55761597 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 159

Conread position: 100-284
Cow position: chr11:41603583-41603779 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 41

Conread position: 100-317
Cow position: chr11:31506952-31506722 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 100-318
Cow position: chr11:33345551-33345320 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 100-411
Cow position: chr11:2925195-2925512 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 22, 68

Conread position: 100-449
Cow position: chr11:71806048-71806381 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 94, 148

Conread position: 100-475
Cow position: chr11:29946807-29947211 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 256

Conread position: 100-507
Cow position: chr11:43898244-43897817 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 161

Conread position: 101-369
Cow position: chr11:15373944-15373677 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 36

Conread position: 101-424
Cow position: chr11:4662943-4663273 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 117

Conread position: 101-445
Cow position: chr11:33311082-33310714 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 156

Conread position: 101-524
Cow position: chr11:31352453-31352906 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 102-369
Cow position: chr11:71341361-71341626 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 152

Conread position: 102-468
Cow position: chr11:45631662-45632044 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 102-501
Cow position: chr11:3769205-3769599 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 103-471
Cow position: chr11:7414778-7415128 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 14

Conread position: 104-285
Cow position: chr11:7013646-7013834 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 24

Conread position: 104-508
Cow position: chr11:76114744-76114333 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 48

Conread position: 105-509
Cow position: chr11:80761277-80761697 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 394

Conread position: 106-274
Cow position: chr11:18785777-18785951 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 72

Conread position: 106-321
Cow position: chr11:6194304-6194079 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 164

Conread position: 107-369
Cow position: chr11:60143207-60143473 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 29

Conread position: 107-454
Cow position: chr11:36799209-36799561 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 107-462
Cow position: chr11:11232360-11232728 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 166

Conread position: 107-496
Cow position: chr11:30925253-30924834 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 107-501
Cow position: chr11:42359218-42358812 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 200

Conread position: 107-509
Cow position: chr11:8339322-8339725 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 52

Conread position: 107-532
Cow position: chr11:30934515-30934076 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 138

Conread position: 108-352
Cow position: chr11:13075714-13075948 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 66

Conread position: 109-369
Cow position: chr11:77118796-77118537 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 144

Conread position: 109-474
Cow position: chr11:1362371-1362767 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 110-296
Cow position: chr11:69652690-69652889 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 9

Conread position: 110-469
Cow position: chr11:8428603-8428214 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 110-474
Cow position: chr11:50778459-50778086 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 110-502
Cow position: chr11:8840652-8841056 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 135

Conread position: 110-509
Cow position: chr11:73512348-73512740 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 118-361
Cow position: chr11:35775422-35775172 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 114

Conread position: 118-362
Cow position: chr11:16540947-16540695 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 69, 118

Conread position: 118-363
Cow position: chr11:55494764-55494514 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 171

Conread position: 118-406
Cow position: chr11:52983760-52983474 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 133

Conread position: 118-407
Cow position: chr11:16232850-16233148 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 167

Conread position: 118-440
Cow position: chr11:64905082-64904745 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 69, 18

Conread position: 118-463
Cow position: chr11:30355143-30354793 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 116

Conread position: 118-464
Cow position: chr11:12111374-12111743 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 222

Conread position: 118-471
Cow position: chr11:56654640-56654266 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 336

Conread position: 118-487
Cow position: chr11:8147814-8148190 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 116

Conread position: 119-306
Cow position: chr11:249398-249596 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 119-344
Cow position: chr11:86720335-86720561 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 32

Conread position: 119-347
Cow position: chr11:48306263-48306496 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 137

Conread position: 119-369
Cow position: chr11:5547-5292 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 66, 123

Conread position: 119-379
Cow position: chr11:21438292-21438031 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 125

Conread position: 119-414
Cow position: chr11:69810987-69810679 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 142

Conread position: 119-414
Cow position: chr11:71009207-71008926 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 17

Conread position: 119-437
Cow position: chr11:17661167-17660840 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 117

Conread position: 119-445
Cow position: chr11:16342145-16342497 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 229

Conread position: 119-452
Cow position: chr11:22499283-22499614 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 148

Conread position: 119-454
Cow position: chr11:45897965-45898321 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 140

Conread position: 119-459
Cow position: chr11:47545215-47544856 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 119-464
Cow position: chr11:377558-377926 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 119-465
Cow position: chr11:33341061-33341422 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 223

Conread position: 119-469
Cow position: chr11:25331661-25332009 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 16

Conread position: 119-474
Cow position: chr11:23128456-23128821 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 246

Conread position: 119-474
Cow position: chr11:33527136-33526791 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 119-475
Cow position: chr11:35873919-35874267 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 155

Conread position: 119-475
Cow position: chr11:49934647-49935028 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 370

Conread position: 119-501
Cow position: chr11:70745452-70745848 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 17

Conread position: 119-502
Cow position: chr11:36987033-36986649 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 111

Conread position: 119-502
Cow position: chr11:58400332-58399956 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 123

Conread position: 119-503
Cow position: chr11:67246869-67246492 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 63

Conread position: 119-508
Cow position: chr11:63469959-63469566 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 119-508
Cow position: chr11:64090013-64090405 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 78

Conread position: 119-508
Cow position: chr11:66424796-66425193 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 119-508
Cow position: chr11:80819921-80820318 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 119-509
Cow position: chr11:10213485-10213876 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 119-509
Cow position: chr11:13061151-13061539 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 159

Conread position: 119-509
Cow position: chr11:44036803-44036395 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 132

Conread position: 119-509
Cow position: chr11:70620128-70619734 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 165

Conread position: 119-514
Cow position: chr11:41809409-41809802 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 130

Conread position: 119-524
Cow position: chr11:35363565-35363160 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 81

Conread position: 119-524
Cow position: chr11:44234439-44234022 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 205

Conread position: 120-302
Cow position: chr11:6194480-6194300 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 23

Conread position: 120-315
Cow position: chr11:84490416-84490610 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 109

Conread position: 120-336
Cow position: chr11:65767282-65767056 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 120-507
Cow position: chr11:3833280-3833666 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 32

Conread position: 120-509
Cow position: chr11:58588427-58588023 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 120-509
Cow position: chr11:64638443-64638843 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 252

Conread position: 122-291
Cow position: chr11:9368906-9368730 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 135

Conread position: 122-458
Cow position: chr11:32438871-32439219 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 34

Conread position: 122-474
Cow position: chr11:43646331-43646706 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 206

Conread position: 123-462
Cow position: chr11:51144793-51144444 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 115

Conread position: 126-503
Cow position: chr11:82796212-82796590 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 146

Conread position: 127-302
Cow position: chr11:75965576-75965757 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 115

Conread position: 128-419
Cow position: chr11:2509231-2509525 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 170

Conread position: 128-454
Cow position: chr11:16261950-16262297 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 134

Conread position: 133-524
Cow position: chr11:3704350-3703985 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 25

Conread position: 136-473
Cow position: chr11:40258345-40258682 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 46

Conread position: 136-501
Cow position: chr11:62019521-62019913 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 136-520
Cow position: chr11:70273373-70272972 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 352

Conread position: 138-408
Cow position: chr11:61858838-61859118 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 118

Conread position: 138-474
Cow position: chr11:62880567-62880910 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 112

Conread position: 139-459
Cow position: chr11:24937729-24937392 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 197

Conread position: 142-324
Cow position: chr11:46592526-46592337 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 19

Conread position: 143-369
Cow position: chr11:7497587-7497820 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 60, 108

Conread position: 143-418
Cow position: chr11:38874342-38874630 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 273

Conread position: 143-425
Cow position: chr11:10686827-10687123 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 173

Conread position: 144-369
Cow position: chr11:49231932-49231702 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 111

Conread position: 144-384
Cow position: chr11:53512140-53511894 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 5

Conread position: 144-440
Cow position: chr11:2832633-2832921 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 181, 42

Conread position: 145-367
Cow position: chr11:20684514-20684749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 96

Conread position: 145-399
Cow position: chr11:70114530-70114263 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 188

Conread position: 145-439
Cow position: chr11:17495684-17495995 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 150

Conread position: 145-462
Cow position: chr11:44819151-44818823 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 75, 59

Conread position: 145-503
Cow position: chr11:33349643-33350016 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 145-508
Cow position: chr11:32750168-32749788 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 145-509
Cow position: chr11:37278166-37278519 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 77

Conread position: 146-424
Cow position: chr11:18340984-18341273 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 182

Conread position: 146-466
Cow position: chr11:32378244-32377910 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 146-503
Cow position: chr11:4732399-4732024 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 119

Conread position: 147-509
Cow position: chr11:80787851-80788231 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 150-499
Cow position: chr11:30120609-30120973 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 235

Conread position: 153-457
Cow position: chr11:30597043-30596728 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 228

Conread position: 153-509
Cow position: chr11:19788172-19787828 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 84

Conread position: 154-442
Cow position: chr11:81282006-81281692 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 159-473
Cow position: chr11:37347515-37347191 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 165-474
Cow position: chr11:67207767-67207455 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 59

Conread position: 175-328
Cow position: chr11:31526448-31526601 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 179-422
Cow position: chr11:2514579-2514825 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 184, 132

Conread position: 183-369
Cow position: chr11:48042024-48042214 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 156
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 65

Conread position: 183-421
Cow position: chr11:83000521-83000763 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 49, 203

Conread position: 183-430
Cow position: chr11:57769352-57769591 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 143, 52

Conread position: 183-467
Cow position: chr11:17192268-17192560 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 184-466
Cow position: chr11:77208052-77207771 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 49

Conread position: 184-499
Cow position: chr11:71846339-71846659 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 186-344
Cow position: chr11:51626972-51626813 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 56

Conread position: 186-344
Cow position: chr11:65435862-65435704 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 40

Conread position: 186-357
Cow position: chr11:56349015-56349178 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 24

Conread position: 186-368
Cow position: chr11:21427985-21428165 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 140, 56

Conread position: 186-369
Cow position: chr11:33468718-33468538 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 56

Conread position: 186-396
Cow position: chr11:9463844-9463622 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 61

Conread position: 186-405
Cow position: chr11:18373083-18372862 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 182, 46

Conread position: 186-411
Cow position: chr11:2811722-2811945 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 71

Conread position: 186-424
Cow position: chr11:14094412-14094659 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 186-453
Cow position: chr11:24585189-24584915 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 171

Conread position: 186-470
Cow position: chr11:42002940-42003235 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 22

Conread position: 186-474
Cow position: chr11:38194165-38193866 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 186-475
Cow position: chr11:58614668-58614374 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 118, 46

Conread position: 186-475
Cow position: chr11:77683177-77682893 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 48, 20

Conread position: 186-496
Cow position: chr11:32610006-32609687 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 55

Conread position: 186-500
Cow position: chr11:1485867-1486180 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 50

Conread position: 186-502
Cow position: chr11:51043920-51044247 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 40

Conread position: 186-503
Cow position: chr11:18388865-18389175 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 49

Conread position: 186-509
Cow position: chr11:2309880-2309552 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 56

Conread position: 186-509
Cow position: chr11:7333712-7334043 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 38

Conread position: 186-509
Cow position: chr11:10076776-10076454 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 176

Conread position: 186-509
Cow position: chr11:53130821-53130495 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 300

Conread position: 186-509
Cow position: chr11:83196505-83196181 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 16

Conread position: 187-379
Cow position: chr11:57170823-57171015 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 181, 60

Conread position: 187-468
Cow position: chr11:38845255-38845542 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 58

Conread position: 187-509
Cow position: chr11:8827786-8827460 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 187-525
Cow position: chr11:81174893-81174554 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 49

Conread position: 188-397
Cow position: chr11:18399322-18399533 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 57

Conread position: 188-418
Cow position: chr11:18591428-18591662 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 189, 58

Conread position: 190-298
Cow position: chr11:59915926-59915820 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 190-330
Cow position: chr11:80537492-80537351 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 113

Conread position: 190-358
Cow position: chr11:63499322-63499487 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 134, 13

Conread position: 190-369
Cow position: chr11:36672040-36672222 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 136, 59

Conread position: 190-370
Cow position: chr11:15525971-15525778 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 103

Conread position: 190-496
Cow position: chr11:6154413-6154106 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 83

Conread position: 190-501
Cow position: chr11:17112626-17112939 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 98

Conread position: 190-508
Cow position: chr11:73478612-73478304 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 44

Conread position: 190-509
Cow position: chr11:4412018-4412340 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 44

Conread position: 190-509
Cow position: chr11:47165137-47165454 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 191-486
Cow position: chr11:1485356-1485658 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 44

Conread position: 193-357
Cow position: chr11:30543619-30543455 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 47

Conread position: 193-474
Cow position: chr11:30110963-30110686 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 54

Conread position: 193-492
Cow position: chr11:85764936-85764650 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 42

Conread position: 193-509
Cow position: chr11:67950971-67951277 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 193-524
Cow position: chr11:17968581-17968911 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 105

Conread position: 194-378
Cow position: chr11:8936490-8936668 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 15

Conread position: 194-399
Cow position: chr11:36301078-36301290 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 42

Conread position: 194-465
Cow position: chr11:48697448-48697171 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 194-488
Cow position: chr11:53719944-53719648 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 195-330
Cow position: chr11:4391298-4391164 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 195-345
Cow position: chr11:70825091-70824945 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 88

Conread position: 195-366
Cow position: chr11:6101609-6101443 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 91

Conread position: 195-433
Cow position: chr11:62808653-62808892 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 47

Conread position: 195-443
Cow position: chr11:63516826-63516570 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 195-457
Cow position: chr11:62045395-62045130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 63

Conread position: 195-462
Cow position: chr11:8105784-8105509 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 195-475
Cow position: chr11:62965549-62965840 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 195-494
Cow position: chr11:62016282-62016576 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 195-494
Cow position: chr11:70609787-70609481 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 195-495
Cow position: chr11:27386340-27386646 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 181

Conread position: 195-500
Cow position: chr11:41577021-41577316 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 195-502
Cow position: chr11:62979489-62979164 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 195-509
Cow position: chr11:68570670-68570992 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 45

Conread position: 198-335
Cow position: chr11:10837530-10837669 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 198-356
Cow position: chr11:86894678-86894514 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 198-362
Cow position: chr11:80369621-80369451 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 38

Conread position: 198-369
Cow position: chr11:67136432-67136614 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 108

Conread position: 198-410
Cow position: chr11:21830352-21830573 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 198-463
Cow position: chr11:71455788-71455513 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 24

Conread position: 198-470
Cow position: chr11:58460107-58459849 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 182, 44

Conread position: 203-367
Cow position: chr11:65843103-65843267 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 155, 117

Conread position: 203-369
Cow position: chr11:33364333-33364170 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 5

Conread position: 203-461
Cow position: chr11:12555413-12555690 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 258

Conread position: 203-467
Cow position: chr11:58102784-58103053 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 203-488
Cow position: chr11:65857851-65857558 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 203-502
Cow position: chr11:81614649-81614942 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 69

Conread position: 204-460
Cow position: chr11:9088314-9088566 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 125, 44

Conread position: 204-501
Cow position: chr11:81605619-81605325 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 128, 42

Conread position: 205-347
Cow position: chr11:37546528-37546666 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 205-488
Cow position: chr11:26535761-26535475 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 29

Conread position: 207-495
Cow position: chr11:21819454-21819743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 238

Conread position: 208-488
Cow position: chr11:77241356-77241081 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 41

Conread position: 208-509
Cow position: chr11:49106043-49105733 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 45

Conread position: 210-449
Cow position: chr11:10877225-10876977 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 211-356
Cow position: chr11:27661115-27660964 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 141

Conread position: 211-401
Cow position: chr11:61298997-61299189 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 97

Conread position: 211-466
Cow position: chr11:75748417-75748158 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 211-467
Cow position: chr11:48901099-48901356 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 34

Conread position: 211-526
Cow position: chr11:9837115-9837437 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 290

Conread position: 212-501
Cow position: chr11:4384601-4384313 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 31

Conread position: 212-509
Cow position: chr11:43914197-43913902 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 213-479
Cow position: chr11:13191206-13190929 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 213-502
Cow position: chr11:31901027-31900735 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 34

Conread position: 213-509
Cow position: chr11:70382709-70383015 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 214-524
Cow position: chr11:66942985-66943293 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 44

Conread position: 220-509
Cow position: chr11:81066613-81066902 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 27

Conread position: 226-353
Cow position: chr11:36361917-36362043 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 228-368
Cow position: chr11:29786639-29786780 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 19

Conread position: 230-524
Cow position: chr11:35276267-35275960 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 67

Conread position: 231-464
Cow position: chr11:27462429-27462660 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 232-365
Cow position: chr11:29266506-29266370 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 232-508
Cow position: chr11:17981375-17981089 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 14

Conread position: 232-509
Cow position: chr11:51208380-51208096 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 30

Conread position: 234-433
Cow position: chr11:41438258-41438468 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 234-525
Cow position: chr11:61137233-61137534 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 150

Conread position: 235-508
Cow position: chr11:66896840-66897119 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 9

Conread position: 236-484
Cow position: chr11:68572711-68572958 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 17

Conread position: 236-509
Cow position: chr11:74929745-74929460 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 242-475
Cow position: chr11:57111355-57111594 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 11

Conread position: 242-509
Cow position: chr11:47565988-47566274 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 7

Conread position: 243-454
Cow position: chr11:57061830-57061611 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 202

Conread position: 246-412
Cow position: chr11:40860760-40860939 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 246-464
Cow position: chr11:2281345-2281562 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 79, 17

Conread position: 248-502
Cow position: chr11:78820044-78819794 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 61

Conread position: 250-391
Cow position: chr11:56524604-56524748 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 16

Conread position: 251-527
Cow position: chr11:65693894-65694172 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 55

Conread position: 252-475
Cow position: chr11:80825106-80824879 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 120

Conread position: 254-475
Cow position: chr11:25165383-25165159 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 189

Conread position: 254-509
Cow position: chr11:84890809-84891063 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 224

Conread position: 256-509
Cow position: chr11:55348206-55347945 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 235

Conread position: 257-422
Cow position: chr11:6329187-6329013 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 259-509
Cow position: chr11:25337012-25336751 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 109, 56

Conread position: 261-508
Cow position: chr11:33600751-33601007 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 36

Conread position: 261-509
Cow position: chr11:8563215-8563470 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 14

Conread position: 261-509
Cow position: chr11:38843501-38843243 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 263-410
Cow position: chr11:81848789-81848640 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 23

Conread position: 264-466
Cow position: chr11:10127693-10127891 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 12

Conread position: 265-464
Cow position: chr11:48232663-48232467 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 96

Conread position: 266-474
Cow position: chr11:31885447-31885231 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 267-443
Cow position: chr11:7705566-7705392 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 105

Conread position: 269-474
Cow position: chr11:79019597-79019801 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 110

Conread position: 288-493
Cow position: chr11:6620378-6620596 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 293-403
Cow position: chr11:83033796-83033914 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 295-454
Cow position: chr11:15608391-15608558 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 295-511
Cow position: chr11:10294491-10294274 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 158

Conread position: 305-410
Cow position: chr11:375057-374948 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 321-509
Cow position: chr11:40401971-40402153 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 34

Conread position: 322-494
Cow position: chr11:78480673-78480489 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 151
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 327-511
Cow position: chr11:18891150-18890948 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.