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Cow genome map

           
Conread name:
           
Pig1-83L09
        

               
Conread position:
               
1-184
               

               
Cow position:
               
chr17:17782311-17782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr17:9077952-9078145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr17:21236780-21236598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:3387979-3387790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:6787198-6787009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:24895335-24895146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr17:24898462-24898273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr17:21718739-21718935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr17:25930289-25930542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr17:9509737-9510003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr17:5012808-5013093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr17:35149267-35149559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr17:33154900-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr17:37815932-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr17:5012101-5011798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr17:27730802-27730474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr17:36814622-36814294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr17:40639207-40638884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr17:24751170-24750850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:21744194-21743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:36864885-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr17:14652525-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr17:3468007-3467595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr17:1256242-1256699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr17:21738606-21739102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr17:36791383-36790922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr17:15684763-15684278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr17:32138159-32138636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr17:21959428-21959932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr17:11839983-11839447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr17:32418859-32419372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr17:39412240-39412756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr17:5224636-5224143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr17:18720197-18720704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr17:22775628-22775132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:6936418-6936925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:10528472-10529002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:14049950-14050453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:15102632-15103141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:17180301-17179779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:17222601-17222083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:17951486-17950982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:24077642-24077145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr17:25901467-25900938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr17:25121993-25122171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr17:18766733-18766995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr17:28982433-28982137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr17:39606675-39606384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr17:25616502-25616145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr17:32349325-32348958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr17:25118143-25117742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr17:18146449-18146025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 268
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr17:28468387-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr17:33271413-33271934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr17:10508178-10508371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr17:18673782-18674008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr17:29995178-29995465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr17:2275721-2275398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr17:6318611-6318982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr17:27058292-27058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr17:12325512-12325962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
3-466
               

               
Cow position:
               
chr17:33793408-33792964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
3-474
               

               
Cow position:
               
chr17:24786768-24787247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
3-475
               

               
Cow position:
               
chr17:6424012-6423534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr17:16446169-16446690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr17:8663765-8663577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr17:7590202-7590516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr17:9770760-9770455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr17:9824924-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
4-465
               

               
Cow position:
               
chr17:8836695-8837158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
4-475
               

               
Cow position:
               
chr17:7698306-7697829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr17:25612340-25611892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
5-486
               

               
Cow position:
               
chr17:11664323-11664826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
5-524
               

               
Cow position:
               
chr17:13922738-13922202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr17:8597854-8598182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr17:40673625-40673270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
6-433
               

               
Cow position:
               
chr17:3202160-3202585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
6-439
               

               
Cow position:
               
chr17:12536219-12536658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
6-451
               

               
Cow position:
               
chr17:12447149-12447601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
6-502
               

               
Cow position:
               
chr17:21292786-21293299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr17:25800633-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
7-443
               

               
Cow position:
               
chr17:33275508-33275940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr17:5768149-5767688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr17:26225280-26225100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr17:43315038-43315288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
8-252
               

               
Cow position:
               
chr17:21788392-21788660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr17:3389085-3388809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr17:26448797-26448508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr17:34790812-34791131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
8-369
               

               
Cow position:
               
chr17:32280920-32280553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr17:20884780-20884397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr17:10458682-10459111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
8-429
               

               
Cow position:
               
chr17:12946107-12946546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr17:32278652-32279113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
8-474
               

               
Cow position:
               
chr17:7810496-7810967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr17:5898272-5898759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
8-484
               

               
Cow position:
               
chr17:18202013-18201538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
8-484
               

               
Cow position:
               
chr17:31480779-31481278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
8-501
               

               
Cow position:
               
chr17:17059669-17059187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
8-509
               

               
Cow position:
               
chr17:12289156-12289680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
8-524
               

               
Cow position:
               
chr17:32993375-32993889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr17:20929495-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr17:37340781-37341050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
9-471
               

               
Cow position:
               
chr17:20157859-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
9-471
               

               
Cow position:
               
chr17:23246437-23245990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
9-524
               

               
Cow position:
               
chr17:15664927-15664393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
9-524
               

               
Cow position:
               
chr17:32989724-32989217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr17:7143107-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr17:10825725-10825553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chr17:18934503-18934205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
12-305
               

               
Cow position:
               
chr17:21039804-21039512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
12-405
               

               
Cow position:
               
chr17:11962286-11962705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr17:29355995-29356423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
12-471
               

               
Cow position:
               
chr17:41289796-41290240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
12-499
               

               
Cow position:
               
chr17:21003583-21004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
12-502
               

               
Cow position:
               
chr17:20848776-20848280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
14-484
               

               
Cow position:
               
chr17:40312946-40312489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr17:8809264-8809417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr17:24111359-24111527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr17:20836335-20836164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr17:25139519-25139336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr17:946600-946384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
16-274
               

               
Cow position:
               
chr17:25473037-25473301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-281
               

               
Cow position:
               
chr17:25511486-25511214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr17:32332848-32333123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
16-290
               

               
Cow position:
               
chr17:40383962-40384243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr17:22051347-22051644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
16-324
               

               
Cow position:
               
chr17:3153324-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-334
               

               
Cow position:
               
chr17:17193733-17193413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
16-362
               

               
Cow position:
               
chr17:11831874-11832228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr17:5143929-5144317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
16-413
               

               
Cow position:
               
chr17:4105748-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
16-413
               

               
Cow position:
               
chr17:4121483-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
16-437
               

               
Cow position:
               
chr17:908983-908558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-466
               

               
Cow position:
               
chr17:22564422-22563969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
16-466
               

               
Cow position:
               
chr17:25128110-25128567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-467
               

               
Cow position:
               
chr17:11280847-11281326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
16-474
               

               
Cow position:
               
chr17:34948881-34948414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
16-485
               

               
Cow position:
               
chr17:29292146-29292606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
16-501
               

               
Cow position:
               
chr17:9854226-9853733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
16-502
               

               
Cow position:
               
chr17:11215649-11216134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
16-502
               

               
Cow position:
               
chr17:20992794-20993294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr17:29714970-29715447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr17:40394263-40393767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr17:17044090-17044371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
17-303
               

               
Cow position:
               
chr17:26802680-26802988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 278
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr17:21806206-21806520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
17-455
               

               
Cow position:
               
chr17:27429799-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
17-509
               

               
Cow position:
               
chr17:20092887-20093385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
17-516
               

               
Cow position:
               
chr17:24883327-24883833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
17-524
               

               
Cow position:
               
chr17:33933506-33934022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
18-188
               

               
Cow position:
               
chr17:19899142-19898963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
18-415
               

               
Cow position:
               
chr17:17682672-17683064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
18-501
               

               
Cow position:
               
chr17:13243812-13244279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
18-524
               

               
Cow position:
               
chr17:24824488-24823989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
19-403
               

               
Cow position:
               
chr17:24559534-24559145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr17:1025594-1025885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
21-187
               

               
Cow position:
               
chr17:10016516-10016353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr17:20335885-20335558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
21-364
               

               
Cow position:
               
chr17:30728746-30728411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
23-460
               

               
Cow position:
               
chr17:40741891-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
23-475
               

               
Cow position:
               
chr17:7132187-7132680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
25-508
               

               
Cow position:
               
chr17:43717105-43717568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
28-509
               

               
Cow position:
               
chr17:40772062-40771567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
29-367
               

               
Cow position:
               
chr17:26233596-26233940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
31-509
               

               
Cow position:
               
chr17:18860511-18860979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 53
               

               
Conread position:
               
37-366
               

               
Cow position:
               
chr17:11215007-11215342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr17:40355486-40355269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
38-302
               

               
Cow position:
               
chr17:25126569-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr17:5349898-5350195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
38-341
               

               
Cow position:
               
chr17:10431739-10432064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 229
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr17:1634268-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
38-454
               

               
Cow position:
               
chr17:11362401-11361977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
39-184
               

               
Cow position:
               
chr17:7711660-7711514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
39-185
               

               
Cow position:
               
chr17:5344843-5344693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr17:9260387-9260539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr17:11920938-11921092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr17:19544008-19544159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
39-243
               

               
Cow position:
               
chr17:17035170-17034958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
39-244
               

               
Cow position:
               
chr17:40276960-40276747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
39-247
               

               
Cow position:
               
chr17:24862679-24862463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
39-257
               

               
Cow position:
               
chr17:21466034-21466268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
39-272
               

               
Cow position:
               
chr17:24163258-24163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
39-276
               

               
Cow position:
               
chr17:25584468-25584216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
39-283
               

               
Cow position:
               
chr17:7571330-7571069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
39-291
               

               
Cow position:
               
chr17:18818786-18818530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
39-312
               

               
Cow position:
               
chr17:5372308-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr17:29026299-29025991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
39-347
               

               
Cow position:
               
chr17:25342516-25342835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
39-351
               

               
Cow position:
               
chr17:25513894-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
39-353
               

               
Cow position:
               
chr17:40250634-40250326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
39-378
               

               
Cow position:
               
chr17:27183718-27184069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
39-387
               

               
Cow position:
               
chr17:9965798-9966162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
39-406
               

               
Cow position:
               
chr17:45296630-45296283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr17:25917110-25916731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
39-411
               

               
Cow position:
               
chr17:1562567-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
39-435
               

               
Cow position:
               
chr17:1063392-1063003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr17:24773900-24773492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
39-443
               

               
Cow position:
               
chr17:5514981-5514565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
39-443
               

               
Cow position:
               
chr17:26000343-25999922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
39-455
               

               
Cow position:
               
chr17:1035370-1035811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr17:32471564-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
39-465
               

               
Cow position:
               
chr17:33053078-33052646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 188
               

               
Conread position:
               
39-474
               

               
Cow position:
               
chr17:24587847-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
39-474
               

               
Cow position:
               
chr17:36275560-36275131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 210
               

               
Conread position:
               
39-484
               

               
Cow position:
               
chr17:29080761-29080330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
39-489
               

               
Cow position:
               
chr17:20071879-20072315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr17:20801038-20800564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
39-500
               

               
Cow position:
               
chr17:21363607-21363156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
39-502
               

               
Cow position:
               
chr17:14033417-14033901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
39-502
               

               
Cow position:
               
chr17:27795879-27795394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr17:11296863-11296377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr17:11618811-11618319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr17:21114731-21115206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr17:23100998-23101468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr17:26231189-26230678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
40-198
               

               
Cow position:
               
chr17:44234468-44234313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
40-352
               

               
Cow position:
               
chr17:11912282-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
40-369
               

               
Cow position:
               
chr17:1114121-1113769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 226
               

               
Conread position:
               
40-369
               

               
Cow position:
               
chr17:31856895-31856547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
40-435
               

               
Cow position:
               
chr17:36454555-36454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 186
               

               
Conread position:
               
40-444
               

               
Cow position:
               
chr17:24490764-24490326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
42-504
               

               
Cow position:
               
chr17:5000380-5000830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
43-188
               

               
Cow position:
               
chr17:18775969-18776114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr17:26789635-26789380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
43-316
               

               
Cow position:
               
chr17:44107949-44108215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
43-354
               

               
Cow position:
               
chr17:18920149-18920451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
43-504
               

               
Cow position:
               
chr17:14025687-14026171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
45-201
               

               
Cow position:
               
chr17:9697467-9697622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
46-296
               

               
Cow position:
               
chr17:950189-949932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr17:24752107-24752509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr17:18473380-18472932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
48-509
               

               
Cow position:
               
chr17:25189500-25189022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
49-197
               

               
Cow position:
               
chr17:35457609-35457752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 6
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr17:26072549-26072748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr17:7802963-7803277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
49-368
               

               
Cow position:
               
chr17:4786272-4786609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 216
               

               
Conread position:
               
49-375
               

               
Cow position:
               
chr17:9056490-9056826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
49-396
               

               
Cow position:
               
chr17:6329321-6328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
49-475
               

               
Cow position:
               
chr17:17410509-17410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
49-493
               

               
Cow position:
               
chr17:11101609-11102039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
49-502
               

               
Cow position:
               
chr17:6566693-6566222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
50-244
               

               
Cow position:
               
chr17:25095694-25095502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr17:31581680-31581371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 173
               

               
Conread position:
               
50-417
               

               
Cow position:
               
chr17:30359664-30359310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 6
               

               
Conread position:
               
50-509
               

               
Cow position:
               
chr17:2810845-2810354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
55-233
               

               
Cow position:
               
chr17:31991143-31990952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
55-244
               

               
Cow position:
               
chr17:27440377-27440183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
55-282
               

               
Cow position:
               
chr17:27303767-27303987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
55-345
               

               
Cow position:
               
chr17:21489421-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr17:25097657-25097247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
55-479
               

               
Cow position:
               
chr17:30665476-30665043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
55-508
               

               
Cow position:
               
chr17:1783422-1783866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 46
               

               
Conread position:
               
56-188
               

               
Cow position:
               
chr17:8823526-8823385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
56-240
               

               
Cow position:
               
chr17:11224313-11224116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
56-334
               

               
Cow position:
               
chr17:22128126-22127846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
56-431
               

               
Cow position:
               
chr17:36203280-36203672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
56-442
               

               
Cow position:
               
chr17:12109011-12108611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
56-494
               

               
Cow position:
               
chr17:16371461-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
56-502
               

               
Cow position:
               
chr17:11277823-11278276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
56-503
               

               
Cow position:
               
chr17:32027244-32027717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
56-508
               

               
Cow position:
               
chr17:19999321-19998875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
56-509
               

               
Cow position:
               
chr17:30529347-30529797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
57-187
               

               
Cow position:
               
chr17:31985738-31985866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr17:3371824-3371558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
57-355
               

               
Cow position:
               
chr17:21325546-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 204
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr17:37699138-37699473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
57-401
               

               
Cow position:
               
chr17:31037174-31037532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
57-502
               

               
Cow position:
               
chr17:20090427-20090872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 204
               

               
Conread position:
               
59-509
               

               
Cow position:
               
chr17:18108886-18109347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
62-509
               

               
Cow position:
               
chr17:1492949-1493417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
64-454
               

               
Cow position:
               
chr17:6624424-6624052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 13
               

               
Conread position:
               
64-495
               

               
Cow position:
               
chr17:18495324-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
69-367
               

               
Cow position:
               
chr17:35338724-35339029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
52, 176
               

               
Conread position:
               
70-453
               

               
Cow position:
               
chr17:20932522-20932131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
71-335
               

               
Cow position:
               
chr17:38263304-38263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
74-188
               

               
Cow position:
               
chr17:25141732-25141618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-472
               

               
Cow position:
               
chr17:21755243-21755665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
78-363
               

               
Cow position:
               
chr17:7137173-7136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 202
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr17:32273501-32273861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 181
               

               
Conread position:
               
79-509
               

               
Cow position:
               
chr17:26765204-26764756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
81-348
               

               
Cow position:
               
chr17:23516762-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 170
               

               
Conread position:
               
81-368
               

               
Cow position:
               
chr17:33657889-33658185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
81-501
               

               
Cow position:
               
chr17:19891804-19891362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
83-357
               

               
Cow position:
               
chr17:34751226-34751509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
83-509
               

               
Cow position:
               
chr17:34596117-34595683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
84-509
               

               
Cow position:
               
chr17:21335512-21335959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
85-254
               

               
Cow position:
               
chr17:3097477-3097654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
85-285
               

               
Cow position:
               
chr17:17982666-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
85-501
               

               
Cow position:
               
chr17:38833220-38832789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
86-474
               

               
Cow position:
               
chr17:12219763-12220164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 248
               

               
Conread position:
               
87-215
               

               
Cow position:
               
chr17:10803053-10802918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
87-232
               

               
Cow position:
               
chr17:5720048-5719891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-234
               

               
Cow position:
               
chr17:12342307-12342463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
87-283
               

               
Cow position:
               
chr17:28814315-28814529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
87-299
               

               
Cow position:
               
chr17:22016916-22017133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr17:39715334-39715082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
87-344
               

               
Cow position:
               
chr17:21922456-21922713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 164
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr17:27202871-27203139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
87-395
               

               
Cow position:
               
chr17:20874572-20874249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 149
               

               
Conread position:
               
87-471
               

               
Cow position:
               
chr17:15340575-15340952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
87-474
               

               
Cow position:
               
chr17:32553878-32554249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
87-484
               

               
Cow position:
               
chr17:15299703-15300106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
87-501
               

               
Cow position:
               
chr17:40331941-40331516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
87-509
               

               
Cow position:
               
chr17:24554174-24553743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
88-231
               

               
Cow position:
               
chr17:27613394-27613248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
88-284
               

               
Cow position:
               
chr17:9487468-9487270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
88-369
               

               
Cow position:
               
chr17:6848971-6848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 159
               

               
Conread position:
               
88-424
               

               
Cow position:
               
chr17:12591351-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr17:17060507-17060929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
88-509
               

               
Cow position:
               
chr17:25796161-25796601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
89-230
               

               
Cow position:
               
chr17:37430330-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
89-475
               

               
Cow position:
               
chr17:9746688-9746294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 168
               

               
Conread position:
               
89-509
               

               
Cow position:
               
chr17:8544476-8544047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
90-474
               

               
Cow position:
               
chr17:8690283-8690666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 27
               

               
Conread position:
               
90-502
               

               
Cow position:
               
chr17:14003999-14003575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
91-509
               

               
Cow position:
               
chr17:8079489-8079056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 161
               

               
Conread position:
               
92-494
               

               
Cow position:
               
chr17:20780687-20780264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
92-501
               

               
Cow position:
               
chr17:20126767-20126368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr17:9117810-9117382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
92-509
               

               
Cow position:
               
chr17:29157588-29157169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 219
               

               
Conread position:
               
94-442
               

               
Cow position:
               
chr17:24822031-24821677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
94-445
               

               
Cow position:
               
chr17:9911927-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 195
               

               
Conread position:
               
94-459
               

               
Cow position:
               
chr17:5250410-5250767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr17:22056859-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr17:40852141-40851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
27, 157
               

               
Conread position:
               
95-524
               

               
Cow position:
               
chr17:1410068-1410522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
97-364
               

               
Cow position:
               
chr17:21757974-21758257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
97-494
               

               
Cow position:
               
chr17:39857552-39857170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
97-505
               

               
Cow position:
               
chr17:5900536-5900131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
97-508
               

               
Cow position:
               
chr17:5895767-5896172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
97-509
               

               
Cow position:
               
chr17:21680946-21680507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 238
               

               
Conread position:
               
98-507
               

               
Cow position:
               
chr17:30718254-30718675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
99-297
               

               
Cow position:
               
chr17:26730448-26730653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 158
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr17:1469540-1469299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 212
               

               
Conread position:
               
99-473
               

               
Cow position:
               
chr17:27048320-27047938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
99-475
               

               
Cow position:
               
chr17:5422904-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 188
               

               
Conread position:
               
100-322
               

               
Cow position:
               
chr17:16616974-16616750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
100-431
               

               
Cow position:
               
chr17:3577701-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
100-466
               

               
Cow position:
               
chr17:2662585-2662191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
100-503
               

               
Cow position:
               
chr17:40288837-40289255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
100-509
               

               
Cow position:
               
chr17:20234375-20233966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
101-271
               

               
Cow position:
               
chr17:34836334-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
101-309
               

               
Cow position:
               
chr17:16158652-16158435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
101-502
               

               
Cow position:
               
chr17:39736337-39735932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
101-524
               

               
Cow position:
               
chr17:924036-923604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
102-230
               

               
Cow position:
               
chr17:8108196-8108332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
102-509
               

               
Cow position:
               
chr17:979007-979395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
103-401
               

               
Cow position:
               
chr17:267444-267736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
104-503
               

               
Cow position:
               
chr17:3683513-3683912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
107-422
               

               
Cow position:
               
chr17:20990033-20990367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr17:21495528-21495116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 326
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr17:36330802-36331227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr17:41030094-41029691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr17:43141552-43141981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
108-342
               

               
Cow position:
               
chr17:15376746-15376520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
108-483
               

               
Cow position:
               
chr17:14848392-14848757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 179
               

               
Conread position:
               
109-496
               

               
Cow position:
               
chr17:6996432-6996031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
111-368
               

               
Cow position:
               
chr17:25502260-25501995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 143
               

               
Conread position:
               
111-509
               

               
Cow position:
               
chr17:11171941-11171535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr17:23563648-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
118-309
               

               
Cow position:
               
chr17:22246138-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
118-366
               

               
Cow position:
               
chr17:10561777-10561517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
118-463
               

               
Cow position:
               
chr17:24580152-24580514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
118-465
               

               
Cow position:
               
chr17:13143564-13143907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
118-524
               

               
Cow position:
               
chr17:2034655-2034274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
119-352
               

               
Cow position:
               
chr17:3354024-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
119-362
               

               
Cow position:
               
chr17:265811-265568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr17:1040886-1040630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
119-385
               

               
Cow position:
               
chr17:32017750-32018010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
119-426
               

               
Cow position:
               
chr17:38362855-38363148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr17:37479861-37480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
119-449
               

               
Cow position:
               
chr17:5006346-5006692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
119-453
               

               
Cow position:
               
chr17:25032340-25032677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 143
               

               
Conread position:
               
119-484
               

               
Cow position:
               
chr17:5688231-5688584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
210, 48
               

               
Conread position:
               
119-496
               

               
Cow position:
               
chr17:21243648-21244041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr17:3503723-3503317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 222
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr17:4213885-4213496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 124
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr17:7760331-7760731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr17:9565442-9565048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr17:30539128-30539510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
119-528
               

               
Cow position:
               
chr17:22032553-22032963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
120-297
               

               
Cow position:
               
chr17:20810348-20810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
120-465
               

               
Cow position:
               
chr17:11156353-11156710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
120-493
               

               
Cow position:
               
chr17:27142886-27142509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
120-509
               

               
Cow position:
               
chr17:40421812-40421408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
121-331
               

               
Cow position:
               
chr17:40406584-40406366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 103
               

               
Conread position:
               
122-351
               

               
Cow position:
               
chr17:11344350-11344119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
122-449
               

               
Cow position:
               
chr17:23147557-23147229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
122-509
               

               
Cow position:
               
chr17:10271629-10271240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
122-509
               

               
Cow position:
               
chr17:32457431-32457841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
123-462
               

               
Cow position:
               
chr17:21628615-21628269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
123-496
               

               
Cow position:
               
chr17:29363223-29363609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
125-278
               

               
Cow position:
               
chr17:7577733-7577565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
125-494
               

               
Cow position:
               
chr17:552834-553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
127-367
               

               
Cow position:
               
chr17:23798416-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
5, 226
               

               
Conread position:
               
128-274
               

               
Cow position:
               
chr17:7851220-7851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
128-313
               

               
Cow position:
               
chr17:36094136-36093943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
128-458
               

               
Cow position:
               
chr17:41891928-41892281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 211
               

               
Conread position:
               
129-455
               

               
Cow position:
               
chr17:31230991-31231321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
132-487
               

               
Cow position:
               
chr17:20652782-20653134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
133-509
               

               
Cow position:
               
chr17:3782171-3781775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
138-509
               

               
Cow position:
               
chr17:32651738-32651355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr17:14762001-14762277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
142-401
               

               
Cow position:
               
chr17:4968231-4967958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
142-454
               

               
Cow position:
               
chr17:38647180-38646862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
144-318
               

               
Cow position:
               
chr17:21478805-21478987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
144-472
               

               
Cow position:
               
chr17:28540145-28539812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
145-405
               

               
Cow position:
               
chr17:31701547-31701281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
145-445
               

               
Cow position:
               
chr17:5398325-5398630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
145-488
               

               
Cow position:
               
chr17:38615076-38614716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
146-460
               

               
Cow position:
               
chr17:1275638-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr17:21917759-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
149-509
               

               
Cow position:
               
chr17:25541705-25542073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 155
               

               
Conread position:
               
161-401
               

               
Cow position:
               
chr17:484690-484451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 200
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr17:1353473-1353235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
185-474
               

               
Cow position:
               
chr17:9778310-9778025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
185-509
               

               
Cow position:
               
chr17:3387341-3387036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
186-331
               

               
Cow position:
               
chr17:1466362-1466507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr17:33410949-33411136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr17:21910855-21911036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
186-441
               

               
Cow position:
               
chr17:43323699-43323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
186-455
               

               
Cow position:
               
chr17:20912954-20912691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
186-466
               

               
Cow position:
               
chr17:21323342-21323082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
184, 46
               

               
Conread position:
               
186-474
               

               
Cow position:
               
chr17:24761162-24761449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
186-475
               

               
Cow position:
               
chr17:34316648-34316935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 56
               

               
Conread position:
               
186-483
               

               
Cow position:
               
chr17:20839500-20839793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
186-487
               

               
Cow position:
               
chr17:44146908-44147211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
186-501
               

               
Cow position:
               
chr17:24550243-24549917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
186-502
               

               
Cow position:
               
chr17:12059026-12059350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr17:3471485-3471154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr17:26183294-26182961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr17:27306226-27305902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
186-512
               

               
Cow position:
               
chr17:31563-31229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
186-524
               

               
Cow position:
               
chr17:1081059-1080728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
187-357
               

               
Cow position:
               
chr17:17266824-17266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
187-443
               

               
Cow position:
               
chr17:7648279-7648026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
187-452
               

               
Cow position:
               
chr17:44232647-44232924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr17:38200699-38200984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
188-453
               

               
Cow position:
               
chr17:33290746-33291015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
189-454
               

               
Cow position:
               
chr17:27765337-27765075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
190-468
               

               
Cow position:
               
chr17:20835643-20835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
190-488
               

               
Cow position:
               
chr17:1526289-1526593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
194-369
               

               
Cow position:
               
chr17:7654394-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
194-380
               

               
Cow position:
               
chr17:3060647-3060827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
138, 91
               

               
Conread position:
               
194-468
               

               
Cow position:
               
chr17:5733410-5733668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
195-354
               

               
Cow position:
               
chr17:20306107-20305947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
195-379
               

               
Cow position:
               
chr17:11921217-11921408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
195-383
               

               
Cow position:
               
chr17:25122351-25122536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr17:30734237-30734451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
195-496
               

               
Cow position:
               
chr17:21031844-21031540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 248
               

               
Conread position:
               
195-501
               

               
Cow position:
               
chr17:242695-242386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
195-502
               

               
Cow position:
               
chr17:1295514-1295825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
195-502
               

               
Cow position:
               
chr17:5255316-5255627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
196-500
               

               
Cow position:
               
chr17:40893207-40892902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
197-509
               

               
Cow position:
               
chr17:21620768-21620453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
198-470
               

               
Cow position:
               
chr17:5246948-5246678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
203-339
               

               
Cow position:
               
chr17:20857795-20857933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
203-449
               

               
Cow position:
               
chr17:17496580-17496326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
203-474
               

               
Cow position:
               
chr17:21312760-21313027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 167
               

               
Conread position:
               
204-400
               

               
Cow position:
               
chr17:5381946-5382137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
204-443
               

               
Cow position:
               
chr17:35311475-35311227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
204-454
               

               
Cow position:
               
chr17:966698-966945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
205-356
               

               
Cow position:
               
chr17:32009393-32009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
205-369
               

               
Cow position:
               
chr17:5830099-5830250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
208-449
               

               
Cow position:
               
chr17:26224555-26224317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
211-454
               

               
Cow position:
               
chr17:15067584-15067829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
212-509
               

               
Cow position:
               
chr17:42347184-42347482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr17:26881292-26881531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
213-473
               

               
Cow position:
               
chr17:25141491-25141241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr17:4472777-4473020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
218-366
               

               
Cow position:
               
chr17:14883048-14883197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
218-407
               

               
Cow position:
               
chr17:20928946-20928752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
220-400
               

               
Cow position:
               
chr17:10222352-10222534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
221-407
               

               
Cow position:
               
chr17:40792251-40792065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
150, 25
               

               
Conread position:
               
221-524
               

               
Cow position:
               
chr17:20361896-20361587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
222-445
               

               
Cow position:
               
chr17:21697770-21697536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
222-528
               

               
Cow position:
               
chr17:4612047-4612355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
224-408
               

               
Cow position:
               
chr17:38613283-38613087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
224-509
               

               
Cow position:
               
chr17:11056344-11056640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
225-364
               

               
Cow position:
               
chr17:24910006-24909867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
231-474
               

               
Cow position:
               
chr17:5745230-5745469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
232-441
               

               
Cow position:
               
chr17:4436211-4436423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
232-472
               

               
Cow position:
               
chr17:15133171-15132942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr17:15854809-15854529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
234-465
               

               
Cow position:
               
chr17:33926108-33926338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr17:21874289-21874577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 167
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr17:35185058-35184773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
237-509
               

               
Cow position:
               
chr17:11386532-11386255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
237-523
               

               
Cow position:
               
chr17:18494500-18494788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr17:36499559-36499832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
239-463
               

               
Cow position:
               
chr17:22781708-22781477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 207
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr17:4606970-4606711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
241-509
               

               
Cow position:
               
chr17:20083510-20083773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
241-509
               

               
Cow position:
               
chr17:23337003-23337275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
242-459
               

               
Cow position:
               
chr17:7890162-7890390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chr17:4824508-4824256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 155
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr17:25168323-25168052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chr17:14051090-14051363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
247-356
               

               
Cow position:
               
chr17:9936033-9936140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr17:3843486-3843231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
248-476
               

               
Cow position:
               
chr17:21017802-21017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
248-502
               

               
Cow position:
               
chr17:19455306-19455550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
261-445
               

               
Cow position:
               
chr17:3518260-3518448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr17:29277224-29276971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr17:27667201-27667455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
267-462
               

               
Cow position:
               
chr17:1327984-1328184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
270-410
               

               
Cow position:
               
chr17:20905522-20905382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
270-509
               

               
Cow position:
               
chr17:3498680-3498925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
291-494
               

               
Cow position:
               
chr17:16117460-16117675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
293-485
               

               
Cow position:
               
chr17:43826286-43826474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr17:20269544-20269358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
60, 129
               
Show alignments to all cow chromosomes.