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Cow genome map

           
Conread name:
           
Pig1-83L09
        

               
Conread position:
               
1-188
               

               
Cow position:
               
chr20:21941688-21941509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr20:27315238-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr20:30744463-30744712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr20:34083979-34083684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr20:16818676-16818335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr20:36741720-36741391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr20:15118536-15118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr20:23286068-23286423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr20:24712102-24711732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr20:15312911-15312496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr20:3141837-3141399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr20:27407632-27408067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr20:34097691-34098150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr20:20967581-20967147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr20:13995072-13994615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr20:39325648-39325181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr20:13023240-13023696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr20:13652116-13652566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr20:20359544-20359998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr20:6054245-6054750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr20:5950382-5950888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr20:31739957-31740471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr20:36779460-36779989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr20:17251981-17251437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr20:34881142-34881306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr20:35207944-35208231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr20:38515052-38514724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr20:11135493-11135831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr20:11548466-11548797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr20:31311793-31311448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr20:28249449-28249069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr20:35742027-35741569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr20:19328655-19328154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr20:22235560-22235062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr20:12995730-12996268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr20:2316167-2316350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr20:26040838-26041023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr20:11359380-11359694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 33
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr20:3739752-3740183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
3-443
               

               
Cow position:
               
chr20:6603293-6602849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr20:10200605-10200103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr20:14807142-14806626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr20:28982958-28982428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr20:34221741-34221319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr20:20739006-20739487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 327
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr20:20590043-20590226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
5-474
               

               
Cow position:
               
chr20:12205487-12205936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr20:7416904-7417145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr20:28818680-28819005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
6-488
               

               
Cow position:
               
chr20:10209064-10208567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
7-188
               

               
Cow position:
               
chr20:5078536-5078347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr20:14759418-14759888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr20:40422844-40423349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
8-188
               

               
Cow position:
               
chr20:8021391-8021201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr20:15530111-15529868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
8-409
               

               
Cow position:
               
chr20:8547318-8546915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
8-445
               

               
Cow position:
               
chr20:23846412-23846867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
8-499
               

               
Cow position:
               
chr20:747183-746711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
8-509
               

               
Cow position:
               
chr20:38818243-38817757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 29
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr20:13034080-13034352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr20:7441891-7442348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
9-475
               

               
Cow position:
               
chr20:4206206-4205738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
10-509
               

               
Cow position:
               
chr20:21345691-21345143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr20:5576439-5576174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
11-352
               

               
Cow position:
               
chr20:7737984-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr20:21428407-21428071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
14-524
               

               
Cow position:
               
chr20:3599154-3599666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
15-507
               

               
Cow position:
               
chr20:8578501-8577989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr20:12334577-12334410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
16-190
               

               
Cow position:
               
chr20:19746218-19746044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr20:21325571-21325362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr20:9376708-9376415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
16-338
               

               
Cow position:
               
chr20:40726368-40726672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
16-435
               

               
Cow position:
               
chr20:14980261-14980698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
16-460
               

               
Cow position:
               
chr20:20984243-20983797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
16-472
               

               
Cow position:
               
chr20:14572130-14572578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
16-474
               

               
Cow position:
               
chr20:12420373-12420845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
16-475
               

               
Cow position:
               
chr20:41028736-41028266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
16-501
               

               
Cow position:
               
chr20:39398727-39398229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr20:6240274-6240788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr20:7425947-7426449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr20:12581710-12582206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr20:13269861-13269366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
16-509
               

               
Cow position:
               
chr20:28605452-28604955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
18-302
               

               
Cow position:
               
chr20:12126058-12126351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
18-509
               

               
Cow position:
               
chr20:32847586-32847093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr20:5703714-5703485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr20:19635937-19636141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr20:4891877-4892136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
21-334
               

               
Cow position:
               
chr20:32709199-32709528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
21-448
               

               
Cow position:
               
chr20:8556029-8556472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
21-525
               

               
Cow position:
               
chr20:33434918-33435437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr20:37919136-37919356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
22-317
               

               
Cow position:
               
chr20:23850861-23850559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
24-331
               

               
Cow position:
               
chr20:5078874-5078548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr20:20898355-20898641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
28-501
               

               
Cow position:
               
chr20:25009399-25009891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
31-367
               

               
Cow position:
               
chr20:4892585-4892934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 160
               

               
Conread position:
               
38-325
               

               
Cow position:
               
chr20:12085203-12085494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
82, 210
               

               
Conread position:
               
38-501
               

               
Cow position:
               
chr20:7658998-7659460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr20:26387682-26387536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
39-189
               

               
Cow position:
               
chr20:13512882-13512733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
39-239
               

               
Cow position:
               
chr20:23590524-23590732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
39-257
               

               
Cow position:
               
chr20:14283149-14282911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
39-281
               

               
Cow position:
               
chr20:20124805-20125056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
39-301
               

               
Cow position:
               
chr20:16941056-16941334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
39-319
               

               
Cow position:
               
chr20:354672-354960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
39-326
               

               
Cow position:
               
chr20:38090142-38089841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
39-329
               

               
Cow position:
               
chr20:33976715-33976408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 162
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr20:38670992-38670684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 205
               

               
Conread position:
               
39-345
               

               
Cow position:
               
chr20:18622801-18622491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
39-355
               

               
Cow position:
               
chr20:28594519-28594183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
39-358
               

               
Cow position:
               
chr20:33067133-33067476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
39-385
               

               
Cow position:
               
chr20:2298569-2298911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
39-398
               

               
Cow position:
               
chr20:4334312-4334667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-421
               

               
Cow position:
               
chr20:3255260-3254878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr20:11045900-11045495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
39-469
               

               
Cow position:
               
chr20:14880012-14879567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
39-471
               

               
Cow position:
               
chr20:38872773-38873234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
39-474
               

               
Cow position:
               
chr20:13829486-13829043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
39-487
               

               
Cow position:
               
chr20:15548666-15549135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
39-499
               

               
Cow position:
               
chr20:4755608-4756071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:4945024-4945504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:5702948-5702489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:13493952-13493478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:13876483-13876967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:24070028-24069556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
39-509
               

               
Cow position:
               
chr20:29845281-29844786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
40-358
               

               
Cow position:
               
chr20:11611906-11611578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
40-509
               

               
Cow position:
               
chr20:39417677-39418151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
41-309
               

               
Cow position:
               
chr20:10772430-10772150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
43-341
               

               
Cow position:
               
chr20:32865980-32866273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
43-509
               

               
Cow position:
               
chr20:8429961-8429489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
43-509
               

               
Cow position:
               
chr20:13967063-13967518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
43-509
               

               
Cow position:
               
chr20:25161909-25162369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
44-369
               

               
Cow position:
               
chr20:38847006-38847349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 213
               

               
Conread position:
               
45-509
               

               
Cow position:
               
chr20:40303667-40304107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr20:39962792-39962517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
48-499
               

               
Cow position:
               
chr20:35146226-35145758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
49-275
               

               
Cow position:
               
chr20:5365140-5364911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
49-277
               

               
Cow position:
               
chr20:14620095-14620331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
49-304
               

               
Cow position:
               
chr20:39016658-39016924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
49-330
               

               
Cow position:
               
chr20:35192971-35192703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 7
               

               
Conread position:
               
49-393
               

               
Cow position:
               
chr20:9266889-9267243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
49-393
               

               
Cow position:
               
chr20:14433209-14433570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr20:41704373-41703922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
49-491
               

               
Cow position:
               
chr20:39518224-39517772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
49-509
               

               
Cow position:
               
chr20:7550445-7549999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
49-523
               

               
Cow position:
               
chr20:34202853-34202374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 181
               

               
Conread position:
               
52-453
               

               
Cow position:
               
chr20:15565604-15566034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
52-509
               

               
Cow position:
               
chr20:20203423-20202957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr20:13943968-13943778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
53-509
               

               
Cow position:
               
chr20:21019773-21019306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
54-285
               

               
Cow position:
               
chr20:6372348-6372592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
54-369
               

               
Cow position:
               
chr20:11188607-11188919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr20:20099388-20099725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
55-201
               

               
Cow position:
               
chr20:15515224-15515378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
55-399
               

               
Cow position:
               
chr20:30710428-30710798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr20:16291896-16291678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chr20:11008378-11008094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr20:16548067-16548356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
57, 199
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr20:41089587-41089904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 260
               

               
Conread position:
               
56-397
               

               
Cow position:
               
chr20:10188480-10188132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr20:39675198-39675609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
67, 150
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr20:30817726-30817289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
56-499
               

               
Cow position:
               
chr20:31746431-31746872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 47
               

               
Conread position:
               
56-504
               

               
Cow position:
               
chr20:24398438-24398886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 149
               

               
Conread position:
               
56-509
               

               
Cow position:
               
chr20:6424159-6423706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
56-509
               

               
Cow position:
               
chr20:7806361-7806821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
57-185
               

               
Cow position:
               
chr20:11822682-11822556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
57-446
               

               
Cow position:
               
chr20:12239482-12239875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
57-508
               

               
Cow position:
               
chr20:40782171-40781719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
57-509
               

               
Cow position:
               
chr20:10469249-10468815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
58-501
               

               
Cow position:
               
chr20:40177447-40177001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
58-509
               

               
Cow position:
               
chr20:9433785-9433343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
58-509
               

               
Cow position:
               
chr20:22959142-22959604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr20:19060638-19060868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
59-369
               

               
Cow position:
               
chr20:32463323-32463635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
59-460
               

               
Cow position:
               
chr20:34251467-34251888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
60-387
               

               
Cow position:
               
chr20:22485063-22484724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr20:17100551-17100287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
77-454
               

               
Cow position:
               
chr20:38551553-38551170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr20:10818054-10818479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr20:3320956-3321308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
81-284
               

               
Cow position:
               
chr20:21815746-21815532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
81-472
               

               
Cow position:
               
chr20:38578587-38578976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr20:22030501-22030258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
84-379
               

               
Cow position:
               
chr20:13494692-13494388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
84-443
               

               
Cow position:
               
chr20:11542111-11542475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
84-475
               

               
Cow position:
               
chr20:17846136-17845735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr20:23506293-23506540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
85-475
               

               
Cow position:
               
chr20:35365223-35364827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
85-500
               

               
Cow position:
               
chr20:19751487-19751061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
85-508
               

               
Cow position:
               
chr20:6096314-6096743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
86-369
               

               
Cow position:
               
chr20:40450175-40449896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
87-243
               

               
Cow position:
               
chr20:35591468-35591636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
87-293
               

               
Cow position:
               
chr20:40158079-40157863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
87-319
               

               
Cow position:
               
chr20:20056311-20056548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr20:14564226-14563984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr20:19090961-19091194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
87-350
               

               
Cow position:
               
chr20:15822724-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
87-353
               

               
Cow position:
               
chr20:34786773-34787041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
87-369
               

               
Cow position:
               
chr20:33438803-33439086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 165
               

               
Conread position:
               
87-369
               

               
Cow position:
               
chr20:40692241-40691942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
87-405
               

               
Cow position:
               
chr20:21761950-21761622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
87-408
               

               
Cow position:
               
chr20:2169552-2169865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
87-464
               

               
Cow position:
               
chr20:11481952-11482353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
87-471
               

               
Cow position:
               
chr20:5827119-5826716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 180
               

               
Conread position:
               
87-499
               

               
Cow position:
               
chr20:4621180-4621590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
87-508
               

               
Cow position:
               
chr20:42469938-42469509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 200
               

               
Conread position:
               
87-509
               

               
Cow position:
               
chr20:23870640-23871074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 197
               

               
Conread position:
               
87-509
               

               
Cow position:
               
chr20:39728630-39728192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
88-291
               

               
Cow position:
               
chr20:7709604-7709821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
88-344
               

               
Cow position:
               
chr20:41883908-41883647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
88-369
               

               
Cow position:
               
chr20:7363137-7362855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
88-374
               

               
Cow position:
               
chr20:8619973-8620272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
88-389
               

               
Cow position:
               
chr20:40446504-40446191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
88-408
               

               
Cow position:
               
chr20:32988656-32988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
88-448
               

               
Cow position:
               
chr20:28067248-28067623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
88-471
               

               
Cow position:
               
chr20:25686170-25686572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 134
               

               
Conread position:
               
88-472
               

               
Cow position:
               
chr20:35009571-35009962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
88-502
               

               
Cow position:
               
chr20:23064657-23065089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
89-474
               

               
Cow position:
               
chr20:40185509-40185897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
89-494
               

               
Cow position:
               
chr20:18392094-18392487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
89-509
               

               
Cow position:
               
chr20:8702746-8703168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
89-509
               

               
Cow position:
               
chr20:11550542-11550107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
90-243
               

               
Cow position:
               
chr20:23678539-23678706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
90-329
               

               
Cow position:
               
chr20:30888206-30887960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
90-466
               

               
Cow position:
               
chr20:6890884-6890489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
90-502
               

               
Cow position:
               
chr20:22065236-22064821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
90-509
               

               
Cow position:
               
chr20:21714942-21714493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
91-442
               

               
Cow position:
               
chr20:9923740-9923406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
91-484
               

               
Cow position:
               
chr20:26077252-26076851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr20:11038750-11038392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
94-330
               

               
Cow position:
               
chr20:30119407-30119648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
94-347
               

               
Cow position:
               
chr20:13983527-13983271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 164
               

               
Conread position:
               
94-469
               

               
Cow position:
               
chr20:38768293-38768672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
94-471
               

               
Cow position:
               
chr20:21372480-21372094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
95-369
               

               
Cow position:
               
chr20:36633985-36633703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
95-407
               

               
Cow position:
               
chr20:15568778-15569106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
95-475
               

               
Cow position:
               
chr20:29805488-29805882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
95-501
               

               
Cow position:
               
chr20:580749-581179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 201
               

               
Conread position:
               
95-509
               

               
Cow position:
               
chr20:19363198-19363621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
96-450
               

               
Cow position:
               
chr20:35906882-35907246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 274
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr20:24902124-24902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
98-379
               

               
Cow position:
               
chr20:4332301-4332014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
99-222
               

               
Cow position:
               
chr20:3512974-3512853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr20:38868801-38868559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
99-395
               

               
Cow position:
               
chr20:14917452-14917156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
99-404
               

               
Cow position:
               
chr20:13025443-13025761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
99-508
               

               
Cow position:
               
chr20:25657672-25658047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
99-509
               

               
Cow position:
               
chr20:13752391-13751987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
99-509
               

               
Cow position:
               
chr20:19237242-19236832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
100-369
               

               
Cow position:
               
chr20:35408013-35407749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
100-406
               

               
Cow position:
               
chr20:5636647-5636325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 152
               

               
Conread position:
               
100-408
               

               
Cow position:
               
chr20:20242249-20241943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
100-474
               

               
Cow position:
               
chr20:42458688-42459075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
100-507
               

               
Cow position:
               
chr20:33532469-33532053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 147
               

               
Conread position:
               
103-340
               

               
Cow position:
               
chr20:5644950-5644702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
106-395
               

               
Cow position:
               
chr20:14540503-14540211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
107-359
               

               
Cow position:
               
chr20:16492232-16491970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
107-471
               

               
Cow position:
               
chr20:11741148-11741524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
107-472
               

               
Cow position:
               
chr20:34596939-34597330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 265
               

               
Conread position:
               
107-494
               

               
Cow position:
               
chr20:40127184-40127580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr20:9412647-9412237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 168
               

               
Conread position:
               
107-509
               

               
Cow position:
               
chr20:9537291-9536878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 387
               

               
Conread position:
               
108-452
               

               
Cow position:
               
chr20:15593441-15593094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
108-474
               

               
Cow position:
               
chr20:40511598-40511983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr20:1576253-1575946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
110-443
               

               
Cow position:
               
chr20:34108261-34107924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
110-445
               

               
Cow position:
               
chr20:31323943-31323602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
112-437
               

               
Cow position:
               
chr20:37165857-37165540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
115-400
               

               
Cow position:
               
chr20:28441476-28441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
5, 147
               

               
Conread position:
               
118-389
               

               
Cow position:
               
chr20:311465-311209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr20:31081183-31080874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
118-509
               

               
Cow position:
               
chr20:18320649-18321053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
119-341
               

               
Cow position:
               
chr20:26077524-26077743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr20:22265108-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
119-352
               

               
Cow position:
               
chr20:35710320-35710075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr20:5385599-5385856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr20:22978471-22978207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
119-378
               

               
Cow position:
               
chr20:8308160-8307894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
119-391
               

               
Cow position:
               
chr20:39266814-39267095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
119-419
               

               
Cow position:
               
chr20:7438707-7439017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
119-442
               

               
Cow position:
               
chr20:21929049-21928714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 131
               

               
Conread position:
               
119-467
               

               
Cow position:
               
chr20:15235896-15235547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 123
               

               
Conread position:
               
119-470
               

               
Cow position:
               
chr20:34777324-34776966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
119-474
               

               
Cow position:
               
chr20:18618763-18618415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr20:19459521-19459902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr20:23792748-23792345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr20:33144409-33144812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr20:35797753-35797347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 231
               

               
Conread position:
               
120-418
               

               
Cow position:
               
chr20:42197456-42197160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
120-509
               

               
Cow position:
               
chr20:33363661-33363257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
121-363
               

               
Cow position:
               
chr20:36040617-36040363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
122-293
               

               
Cow position:
               
chr20:39212440-39212619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
122-340
               

               
Cow position:
               
chr20:1205796-1206018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
122-369
               

               
Cow position:
               
chr20:24834230-24833980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
122-476
               

               
Cow position:
               
chr20:14679758-14679392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
124-488
               

               
Cow position:
               
chr20:6903453-6903091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
125-380
               

               
Cow position:
               
chr20:28955563-28955828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
130-330
               

               
Cow position:
               
chr20:17765198-17765404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
135-484
               

               
Cow position:
               
chr20:16715520-16715166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
136-495
               

               
Cow position:
               
chr20:34001263-34001641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
138-345
               

               
Cow position:
               
chr20:34085193-34084976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
138-501
               

               
Cow position:
               
chr20:3606836-3607202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
142-441
               

               
Cow position:
               
chr20:32083961-32084274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 294
               

               
Conread position:
               
143-380
               

               
Cow position:
               
chr20:8098406-8098157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
143-509
               

               
Cow position:
               
chr20:6257938-6258322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
144-412
               

               
Cow position:
               
chr20:32523583-32523307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
145-362
               

               
Cow position:
               
chr20:19616610-19616379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
145-401
               

               
Cow position:
               
chr20:36010914-36010639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
146-509
               

               
Cow position:
               
chr20:12441580-12441950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
147-509
               

               
Cow position:
               
chr20:22313044-22313419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
151-352
               

               
Cow position:
               
chr20:23103335-23103123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
164-368
               

               
Cow position:
               
chr20:27003637-27003848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
166-459
               

               
Cow position:
               
chr20:33177281-33176973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
183-476
               

               
Cow position:
               
chr20:27843724-27843425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
183-500
               

               
Cow position:
               
chr20:10033848-10034180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
186-330
               

               
Cow position:
               
chr20:37357676-37357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
186-359
               

               
Cow position:
               
chr20:28804638-28804459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
186-368
               

               
Cow position:
               
chr20:34901640-34901459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr20:13795051-13794875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
186-385
               

               
Cow position:
               
chr20:26083909-26084109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
186-408
               

               
Cow position:
               
chr20:10348819-10348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
186-454
               

               
Cow position:
               
chr20:24000729-24000981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
186-468
               

               
Cow position:
               
chr20:24135203-24135483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
183, 61
               

               
Conread position:
               
186-472
               

               
Cow position:
               
chr20:22704363-22704066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
186-474
               

               
Cow position:
               
chr20:14735737-14735453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
186-475
               

               
Cow position:
               
chr20:39019764-39019471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
186-476
               

               
Cow position:
               
chr20:30778237-30777950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
186-487
               

               
Cow position:
               
chr20:18185635-18185342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 61
               

               
Conread position:
               
186-490
               

               
Cow position:
               
chr20:21016552-21016240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
186-501
               

               
Cow position:
               
chr20:35958716-35958398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 260
               

               
Conread position:
               
186-504
               

               
Cow position:
               
chr20:17904227-17903905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 58
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr20:5104382-5104693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr20:7132418-7132089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr20:9126804-9126478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr20:15760881-15761206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
187-509
               

               
Cow position:
               
chr20:9473545-9473872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
187-509
               

               
Cow position:
               
chr20:10884289-10884625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
188-419
               

               
Cow position:
               
chr20:7211106-7210867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
190-356
               

               
Cow position:
               
chr20:30938704-30938533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr20:28832035-28831794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
190-475
               

               
Cow position:
               
chr20:34918335-34918053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
190-479
               

               
Cow position:
               
chr20:3331221-3331523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr20:20202058-20201733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
190-524
               

               
Cow position:
               
chr20:24521813-24521477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
193-406
               

               
Cow position:
               
chr20:7623003-7623208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr20:41403638-41403405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
193-435
               

               
Cow position:
               
chr20:11864072-11864320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
193-474
               

               
Cow position:
               
chr20:23505889-23505605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 102
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr20:18100469-18100160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr20:19146938-19146611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
194-496
               

               
Cow position:
               
chr20:40257030-40256726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
195-322
               

               
Cow position:
               
chr20:396576-396446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
195-323
               

               
Cow position:
               
chr20:34847735-34847609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
195-399
               

               
Cow position:
               
chr20:18500266-18500071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
195-429
               

               
Cow position:
               
chr20:37272774-37272538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
195-435
               

               
Cow position:
               
chr20:34240597-34240340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
195-443
               

               
Cow position:
               
chr20:32068792-32069049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
195-464
               

               
Cow position:
               
chr20:9379465-9379195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
195-473
               

               
Cow position:
               
chr20:11923187-11923464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
195-494
               

               
Cow position:
               
chr20:24002375-24002081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
195-509
               

               
Cow position:
               
chr20:31261783-31261474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
197-486
               

               
Cow position:
               
chr20:20312690-20312973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 45
               

               
Conread position:
               
198-509
               

               
Cow position:
               
chr20:3035162-3034838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 246
               

               
Conread position:
               
203-435
               

               
Cow position:
               
chr20:34365078-34364851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
203-494
               

               
Cow position:
               
chr20:24392030-24391744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 39
               

               
Conread position:
               
204-471
               

               
Cow position:
               
chr20:23936354-23936635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 241
               

               
Conread position:
               
204-472
               

               
Cow position:
               
chr20:6848681-6848400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
204-475
               

               
Cow position:
               
chr20:29632949-29633216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
204-509
               

               
Cow position:
               
chr20:10178048-10178369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
205-443
               

               
Cow position:
               
chr20:9988629-9988391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
205-504
               

               
Cow position:
               
chr20:27314719-27314428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
205-509
               

               
Cow position:
               
chr20:3781374-3781690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
205-509
               

               
Cow position:
               
chr20:27340112-27339804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
208-326
               

               
Cow position:
               
chr20:41973703-41973821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
213-328
               

               
Cow position:
               
chr20:11498552-11498439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr20:9701527-9701735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr20:26469021-26469261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr20:26680164-26679908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr20:41309579-41309383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
221-458
               

               
Cow position:
               
chr20:36331389-36331636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr20:8910953-8910699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
222-473
               

               
Cow position:
               
chr20:37200394-37200137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 178
               

               
Conread position:
               
222-499
               

               
Cow position:
               
chr20:18399798-18399512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
222-499
               

               
Cow position:
               
chr20:26748862-26748581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
222-501
               

               
Cow position:
               
chr20:14614965-14615228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
223-475
               

               
Cow position:
               
chr20:20557617-20557879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
227-451
               

               
Cow position:
               
chr20:8020926-8020694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
229-475
               

               
Cow position:
               
chr20:21325141-21324901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr20:38935210-38935471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
231-410
               

               
Cow position:
               
chr20:18837132-18837320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
231-453
               

               
Cow position:
               
chr20:41374697-41374483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr20:6571350-6571073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr20:7398674-7398952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
237-452
               

               
Cow position:
               
chr20:5269054-5269270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
237-474
               

               
Cow position:
               
chr20:39405778-39405544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
238-508
               

               
Cow position:
               
chr20:207005-207281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
238-509
               

               
Cow position:
               
chr20:12334391-12334123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
238-520
               

               
Cow position:
               
chr20:14011990-14011702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
238-524
               

               
Cow position:
               
chr20:28440106-28439803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
242-488
               

               
Cow position:
               
chr20:17733760-17734011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 202
               

               
Conread position:
               
246-369
               

               
Cow position:
               
chr20:361309-361435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr20:12488623-12488883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
247-524
               

               
Cow position:
               
chr20:12048402-12048134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
248-475
               

               
Cow position:
               
chr20:17363679-17363913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 197
               

               
Conread position:
               
248-502
               

               
Cow position:
               
chr20:12808992-12808745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
249-369
               

               
Cow position:
               
chr20:22722030-22721907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
251-502
               

               
Cow position:
               
chr20:6501809-6501547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
254-501
               

               
Cow position:
               
chr20:33169871-33170122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
261-502
               

               
Cow position:
               
chr20:10919318-10919567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr20:8112812-8112555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
266-443
               

               
Cow position:
               
chr20:11043513-11043688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr20:38414982-38415163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
270-509
               

               
Cow position:
               
chr20:41119897-41119664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
272-460
               

               
Cow position:
               
chr20:9730066-9729891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
288-475
               

               
Cow position:
               
chr20:4781533-4781335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
289-455
               

               
Cow position:
               
chr20:5116335-5116509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
289-484
               

               
Cow position:
               
chr20:1640477-1640681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
290-465
               

               
Cow position:
               
chr20:24902497-24902687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
294-463
               

               
Cow position:
               
chr20:22029904-22029725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
303-443
               

               
Cow position:
               
chr20:18423673-18423529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
322-435
               

               
Cow position:
               
chr20:39212737-39212621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.