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Cow genome map

           
Conread name:
           
Pig1-86D03
        

               
Conread position:
               
1-178
               

               
Cow position:
               
chr14:12954408-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr14:41253013-41252837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr14:22941751-22941562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr14:40754270-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:42437002-42437188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:45718288-45718104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:14316864-14317054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:46998016-46998217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:12035387-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:18309330-18309117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:44084512-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr14:46654565-46654362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:44848392-44848184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr14:21933366-21933153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr14:4203121-4202904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:40283595-40283812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr14:4877251-4877037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr14:15492570-15492791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:41966208-41966442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:19618774-19618548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:43453214-43452978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr14:19394340-19394568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:33247452-33247224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:38920929-38921157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr14:19851956-19851718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr14:19863456-19863220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr14:39037201-39037449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:18657630-18657390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:11043514-11043281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:24922077-24922315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr14:35018776-35018543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:1978094-1977869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:5630139-5630371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:8946107-8945867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:16237535-16237296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:19129483-19129721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:20110745-20110510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:20640652-20640414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:24416854-24417097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:25779079-25779304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:28115211-28114973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:28378336-28378583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:28987681-28987905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:33791168-33791399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:35420787-35420548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:38168669-38168894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:40165401-40165636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:41809676-41809441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:42154994-42154751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:43249565-43249795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr14:50589426-50589171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:3868451-3868215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:8786570-8786339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:10609657-10609904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:10858410-10858646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:12667706-12667947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:14949236-14948995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:23712658-23712901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:24981436-24981670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:25403958-25403729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:27355373-27355619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:27919758-27919523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:33338498-33338266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:35381568-35381803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:37883939-37883704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:38144130-38143898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:40230658-40230422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:49021921-49021684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr14:33830279-33830512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:10702862-10702617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:22583129-22583361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:27338318-27338565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr14:5222314-5222058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr14:19372316-19372573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr14:34199866-34199612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:10078245-10078494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr14:1859639-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr14:24607945-24608170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr14:41471992-41471763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr14:6599979-6599744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr14:11615243-11615014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:3564262-3564488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:20016729-20016488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:24387419-24387661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:25002013-25002246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:37884432-37884201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr14:40432903-40433132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr14:25231672-25231434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr14:5572921-5573187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr14:27275142-27275321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr14:14622197-14621964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr14:8541233-8540999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr14:20600366-20600590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr14:22966734-22966962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr14:36555172-36554942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr14:48412903-48412667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr14:27591977-27591740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr14:41479683-41479446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr14:38378995-38379249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr14:19951548-19951728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr14:20712707-20712475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr14:33341738-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr14:8101774-8102020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr14:23424246-23424454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr14:23443007-23443215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr14:1868393-1868180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr14:48740879-48740663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr14:14979717-14979488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr14:11275582-11275375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr14:34983863-34984074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr14:12324412-12324639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr14:24991113-24991329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chr14:31734855-31734639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr14:35503364-35503526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr14:6175586-6175793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr14:29592724-29592509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
24-241
               

               
Cow position:
               
chr14:7558439-7558216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
24-241
               

               
Cow position:
               
chr14:41127895-41128108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr14:33828164-33828381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr14:23761867-23762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
27-239
               

               
Cow position:
               
chr14:20384982-20384774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
28-240
               

               
Cow position:
               
chr14:8964552-8964753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
28-240
               

               
Cow position:
               
chr14:37131655-37131868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr14:49086310-49086527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr14:12511889-12511730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
37-227
               

               
Cow position:
               
chr14:36289789-36289600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
38-225
               

               
Cow position:
               
chr14:37447454-37447272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
38-238
               

               
Cow position:
               
chr14:7482069-7482264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr14:16033018-16033220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr14:33774038-33773841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr14:7959789-7959980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr14:15032767-15032970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr14:33643767-33643576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr14:21284636-21284840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
41-181
               

               
Cow position:
               
chr14:6226609-6226472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
41-235
               

               
Cow position:
               
chr14:24684116-24683920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
41-238
               

               
Cow position:
               
chr14:44742365-44742171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr14:27362056-27362254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
187, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr14:28304767-28304576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr14:33538920-33538711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
41-269
               

               
Cow position:
               
chr14:14580885-14581107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr14:14466446-14466264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr14:46973452-46973648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr14:11820101-11819909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
44-254
               

               
Cow position:
               
chr14:8750090-8750304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
45-241
               

               
Cow position:
               
chr14:20483437-20483248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
51-241
               

               
Cow position:
               
chr14:21230629-21230819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
52-215
               

               
Cow position:
               
chr14:3836147-3836304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
52-254
               

               
Cow position:
               
chr14:13006528-13006736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
53-240
               

               
Cow position:
               
chr14:28803720-28803531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
56-235
               

               
Cow position:
               
chr14:8754349-8754537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 164
               

               
Conread position:
               
56-242
               

               
Cow position:
               
chr14:12250166-12249980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
57-201
               

               
Cow position:
               
chr14:23591265-23591408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
57-224
               

               
Cow position:
               
chr14:40347130-40346967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
57-236
               

               
Cow position:
               
chr14:24991853-24992027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr14:5835937-5836115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr14:14187361-14187548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr14:14280442-14280635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr14:27312454-27312640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr14:39422562-39422357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
58-241
               

               
Cow position:
               
chr14:11981669-11981868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
58-246
               

               
Cow position:
               
chr14:11748878-11748699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
184, 47
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr14:10721695-10721516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr14:23464783-23464604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
61-212
               

               
Cow position:
               
chr14:46685333-46685483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
61-220
               

               
Cow position:
               
chr14:38673597-38673438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
61-231
               

               
Cow position:
               
chr14:37934577-37934412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr14:19221913-19222092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr14:13809970-13810153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr14:28090939-28090762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
63-240
               

               
Cow position:
               
chr14:24580965-24581134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
67-201
               

               
Cow position:
               
chr14:37467721-37467587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr14:6419261-6419096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr14:22381512-22381340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr14:45605129-45605305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr14:21964162-21964350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
69-235
               

               
Cow position:
               
chr14:15518333-15518173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr14:11846539-11846711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
72-241
               

               
Cow position:
               
chr14:15913509-15913336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
82-225
               

               
Cow position:
               
chr14:50518916-50518776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
84-241
               

               
Cow position:
               
chr14:12484244-12484088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
85-236
               

               
Cow position:
               
chr14:17755619-17755772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
85-241
               

               
Cow position:
               
chr14:22952933-22952783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
101-240
               

               
Cow position:
               
chr14:5502086-5501942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
101-264
               

               
Cow position:
               
chr14:28924461-28924621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
102-236
               

               
Cow position:
               
chr14:4227130-4226997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
103-240
               

               
Cow position:
               
chr14:12614018-12613880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
104-242
               

               
Cow position:
               
chr14:17013582-17013722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
106-232
               

               
Cow position:
               
chr14:46735384-46735514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
117-218
               

               
Cow position:
               
chr14:19740181-19740077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
117-227
               

               
Cow position:
               
chr14:8936561-8936448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
117-240
               

               
Cow position:
               
chr14:19633269-19633392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
117-240
               

               
Cow position:
               
chr14:39518785-39518906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
117-241
               

               
Cow position:
               
chr14:19996406-19996533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
117-241
               

               
Cow position:
               
chr14:50504262-50504134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
119-241
               

               
Cow position:
               
chr14:26470719-26470844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
124-240
               

               
Cow position:
               
chr14:34330642-34330758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
125-240
               

               
Cow position:
               
chr14:24893855-24893970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
125-241
               

               
Cow position:
               
chr14:6490607-6490489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
132-234
               

               
Cow position:
               
chr14:25695486-25695590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
133-241
               

               
Cow position:
               
chr14:24840069-24839960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               
Show alignments to all cow chromosomes.