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Cow genome map

           
Conread name:
           
Pig1-86D03
        

               
Conread position:
               
1-170
               

               
Cow position:
               
chr15:35441054-35440885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:10660531-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:23780047-23779869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr15:43673920-43673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:31928872-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr15:35205129-35204943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr15:5158398-5158581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr15:16928070-16927891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr15:5717734-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr15:9781495-9781685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr15:39326493-39326288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr15:49273981-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr15:4418376-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr15:662444-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr15:9107058-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr15:915819-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr15:43599213-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr15:22938738-22938535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr15:10512248-10512034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:12870840-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr15:20422754-20422540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr15:22930326-22930099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr15:38036923-38036698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:2141279-2141058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:28823794-28823580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:37205072-37205286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr15:29810147-29810360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
214, 17
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr15:35839071-35838841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr15:1083352-1083127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr15:5726349-5726573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr15:4138160-4138385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr15:34140005-34140229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr15:52482804-52482579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr15:10737720-10737496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr15:11559331-11559104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr15:20487179-20486959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:4295787-4296019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:11996003-11995771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:20351856-20352084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:22871637-22871861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:9648681-9648457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:10608282-10608049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:12655892-12655656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:20370431-20370203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:46868691-46868453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr15:23114858-23115101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:16307446-16307670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:26912048-26911823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:38837773-38838004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr15:8428028-8428277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr15:11560491-11560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:144224-143975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:794997-794757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:1804314-1804072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:2968361-2968593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:6462473-6462242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:9622207-9622449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:13554377-13554610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:15880950-15881191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:16112424-16112661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:16583668-16583451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:16639801-16640040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:17100685-17100449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:19186589-19186359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:21941821-21941586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:22532276-22532497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:23798506-23798264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:26919251-26919018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:27900486-27900245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:30047522-30047283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:31857615-31857848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:32980009-32979778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:33303347-33303591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:33976671-33976428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:35417601-35417365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:37381651-37381887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:38806478-38806239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:39405768-39405991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:41000046-40999809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:43914071-43913828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr15:46563460-46563234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:45400-45155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:1722826-1722589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:4534935-4535168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:6657122-6657368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:10088343-10088576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:10245970-10245746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:10456988-10456748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:12304662-12304902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:16439807-16439564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:17196172-17196406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:17233217-17233455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:20459284-20459039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:20534426-20534189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:21420962-21421204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:21893803-21894043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:24797786-24797551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:26573403-26573648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:33284901-33285143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:39599471-39599701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:47280115-47279879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:47843227-47842997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:51779092-51779337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr15:85221-84984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr15:17870260-17870030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr15:5535783-5536016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:5729965-5730205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr15:5234973-5234736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:11011579-11011333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:27973193-27972939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:49922158-49922416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:50302208-50302459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr15:50322618-50322872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr15:23866045-23865789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr15:28258432-28258249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr15:10231725-10231524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr15:22939300-22939096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr15:286503-286719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr15:24941346-24941129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr15:2145113-2144881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:5683170-5683400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:21821899-21821668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:1330078-1329843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:21389139-21388909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:35945554-35945781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:36391699-36391927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:43626494-43626727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:9928384-9928619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:16603850-16604083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:21832411-21832163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:26903214-26903455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr15:50177134-50177374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr15:35642039-35642296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr15:39316817-39316560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr15:34284384-34284205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr15:26404309-26404525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr15:12723115-12723342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr15:17084234-17084467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr15:11658547-11658309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr15:13515392-13515628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr15:50957774-50957539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr15:225778-225543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr15:41620164-41619926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr15:27280898-27281129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr15:44640923-44641159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr15:5566952-5567184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr15:23768229-23768004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr15:5632710-5632927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr15:6905563-6905797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr15:8962040-8962260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr15:7430006-7430237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
12-235
               

               
Cow position:
               
chr15:16904667-16904882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr15:45322818-45323045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr15:18206474-18206251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr15:36782286-36782081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr15:53101627-53101849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
16-240
               

               
Cow position:
               
chr15:16667462-16667243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr15:37777396-37777603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chr15:19119562-19119363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
34-225
               

               
Cow position:
               
chr15:43788308-43788488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
35-241
               

               
Cow position:
               
chr15:19403049-19403242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr15:36773641-36773439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr15:25306602-25306800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr15:16657549-16657774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
38-231
               

               
Cow position:
               
chr15:17859170-17858987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr15:19771192-19771391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr15:38883206-38883412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr15:50341172-50341380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr15:22136743-22136943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr15:45584788-45584981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
40-241
               

               
Cow position:
               
chr15:51427764-51427562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:1301199-1301396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:9871354-9871154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:12441762-12441565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:14856404-14856209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:43030964-43030765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:43827709-43827514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr15:46610995-46611184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr15:32324145-32323944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr15:44256540-44256742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
42-240
               

               
Cow position:
               
chr15:51898292-51898487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr15:40009590-40009389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
44-221
               

               
Cow position:
               
chr15:24038338-24038160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
44-240
               

               
Cow position:
               
chr15:28126980-28126789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
49-214
               

               
Cow position:
               
chr15:13684200-13684033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
53-198
               

               
Cow position:
               
chr15:36725103-36724962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
56-227
               

               
Cow position:
               
chr15:16936771-16936597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
57-227
               

               
Cow position:
               
chr15:53036893-53036722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
57-231
               

               
Cow position:
               
chr15:23927396-23927219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr15:37716855-37716665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr15:4350525-4350339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr15:5498956-5498768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr15:10845797-10845983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr15:52740048-52739860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr15:34145076-34144879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr15:29792827-29792635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
183, 17
               

               
Conread position:
               
60-227
               

               
Cow position:
               
chr15:11363095-11362931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
62-237
               

               
Cow position:
               
chr15:34207111-34206931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr15:15708031-15707853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr15:21522869-21523047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr15:23696828-23696652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
64-240
               

               
Cow position:
               
chr15:36621494-36621674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
65-258
               

               
Cow position:
               
chr15:22095210-22095401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr15:8007070-8007243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr15:12316016-12316185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr15:53680670-53680507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
83-254
               

               
Cow position:
               
chr15:32287651-32287482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
160, 18
               

               
Conread position:
               
85-241
               

               
Cow position:
               
chr15:41583015-41583171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
88-240
               

               
Cow position:
               
chr15:4485251-4485401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
97-238
               

               
Cow position:
               
chr15:5071980-5071842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
98-241
               

               
Cow position:
               
chr15:49738929-49738786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
99-239
               

               
Cow position:
               
chr15:38394539-38394679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
105-241
               

               
Cow position:
               
chr15:5571514-5571375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
106-241
               

               
Cow position:
               
chr15:14020597-14020733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
107-244
               

               
Cow position:
               
chr15:43750639-43750778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
117-235
               

               
Cow position:
               
chr15:18322796-18322675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
117-240
               

               
Cow position:
               
chr15:4861779-4861654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
131-241
               

               
Cow position:
               
chr15:26158465-26158356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
132-240
               

               
Cow position:
               
chr15:240994-241103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
133-240
               

               
Cow position:
               
chr15:14505579-14505685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
136-241
               

               
Cow position:
               
chr15:50568314-50568417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-243
               

               
Cow position:
               
chr15:18284398-18284501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               
Show alignments to all cow chromosomes.