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Cow genome map

           
Conread name:
           
Pig1-86D03
        

               
Conread position:
               
1-163
               

               
Cow position:
               
chr20:10772313-10772152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr20:21345541-21345361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr20:23506362-23506539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr20:16548170-16548350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr20:5078735-5078548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr20:35192880-35192697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr20:15822657-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr20:24711949-24711732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr20:11611787-11611577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr20:19616600-19616379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr20:23103331-23103114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr20:39266850-39267068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:11188699-11188920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:20099492-20099708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:28982808-28982584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr20:33438872-33439087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr20:8578357-8578130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr20:11542180-11542402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr20:28594395-28594162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr20:35797717-35797491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr20:7438743-7438971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr20:15568841-15569065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr20:18320686-18320910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr20:14759557-14759780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr20:21714869-21714629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr20:8098394-8098158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr20:31289618-31289374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr20:34918379-34918151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr20:35365154-35364923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr20:9433695-9433462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr20:34221587-34221353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:4206080-4205839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:5814674-5814446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:6054401-6054646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:17846067-17845835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:19237183-19236950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:19363254-19363492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:20984100-20983874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:30710527-30710774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:32988723-32988965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:34251564-34251811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:35009629-35009874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:35146129-35145885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:36010904-36010665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:38551476-38551247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:38847126-38847363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:39415858-39415616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr20:39728560-39728320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:271315-271552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:10200454-10200218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:11482026-11482264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:13025502-13025739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:14572255-14572485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:14806995-14806757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:17251825-17251578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:19751415-19751180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:21929013-21928775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:22313052-22313287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:23064727-23064958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:29845159-29844926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:33532411-33532179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:34001281-34001525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:35906942-35907176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:39325499-39325256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:40422995-40423219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr20:40450130-40449881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr20:42469867-42469628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr20:747050-746811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr20:6096387-6096635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr20:13652259-13652501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr20:4334422-4334665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr20:4332238-4331993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr20:22484967-22484702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr20:33067253-33067476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr20:12430692-12430903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr20:10188382-10188165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr20:36040582-36040356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr20:24069913-24069687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr20:28296401-28296165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr20:5636588-5636356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr20:5827047-5826813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr20:14980398-14980639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr20:28955594-28955828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr20:33435048-33435296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr20:40511649-40511887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr20:14879896-14879660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr20:34108212-34107977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr20:34085174-34084983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr20:15565723-15565945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr20:40692170-40691934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr20:17470829-17470606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:7659107-7659344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:14433315-14433557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:38768357-38768582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr20:42309858-42310089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr20:18551467-18551238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr20:11453254-11453484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr20:34777284-34777057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr20:24000693-24000931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr20:16492176-16491997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr20:40257073-40256833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr20:5024849-5025072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr20:12995909-12996137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
12-186
               

               
Cow position:
               
chr20:28818830-28819005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr20:6240425-6240647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr20:21761870-21761648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr20:30817637-30817408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr20:10884262-10884491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr20:35958743-35958501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr20:13967161-13967387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
14-234
               

               
Cow position:
               
chr20:30992235-30992017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr20:14735759-14735547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr20:34901655-34901467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr20:19312983-19313189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
28-240
               

               
Cow position:
               
chr20:24521831-24521623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
28-241
               

               
Cow position:
               
chr20:20359698-20359906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
30-235
               

               
Cow position:
               
chr20:36633898-36633694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
31-198
               

               
Cow position:
               
chr20:18392188-18392347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr20:5078276-5078060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr20:7442052-7442256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr20:41627272-41627469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
32-235
               

               
Cow position:
               
chr20:28832049-28831845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr20:15235838-15235649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
35-236
               

               
Cow position:
               
chr20:11923171-11923367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr20:3599321-3599519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr20:9473539-9473743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
38-186
               

               
Cow position:
               
chr20:30119499-30119648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
38-197
               

               
Cow position:
               
chr20:36741548-36741391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr20:6424043-6423886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
38-236
               

               
Cow position:
               
chr20:10033847-10034047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr20:39247985-39247785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr20:4621271-4621468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
39-241
               

               
Cow position:
               
chr20:28067346-28067555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
41-186
               

               
Cow position:
               
chr20:37357677-37357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
41-192
               

               
Cow position:
               
chr20:11548653-11548803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
41-228
               

               
Cow position:
               
chr20:13795052-13794873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr20:27003655-27003854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr20:3331216-3331418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr20:7132419-7132224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr20:10178027-10178234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr20:9537208-9537005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr20:17904228-17904031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
41-254
               

               
Cow position:
               
chr20:22704364-22704144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
42-208
               

               
Cow position:
               
chr20:22265175-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr20:18185635-18185456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr20:33144485-33144684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
44-241
               

               
Cow position:
               
chr20:3321068-3321267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
49-258
               

               
Cow position:
               
chr20:7623000-7623201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
51-240
               

               
Cow position:
               
chr20:13269680-13269499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
52-241
               

               
Cow position:
               
chr20:22445576-22445764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
56-231
               

               
Cow position:
               
chr20:29632944-29633118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
56-241
               

               
Cow position:
               
chr20:34365082-34364904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
57-229
               

               
Cow position:
               
chr20:5938892-5939061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
57-231
               

               
Cow position:
               
chr20:23936350-23936532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr20:31077607-31077432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
57-237
               

               
Cow position:
               
chr20:24002370-24002191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
57-238
               

               
Cow position:
               
chr20:37272769-37272588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 155
               

               
Conread position:
               
57-239
               

               
Cow position:
               
chr20:32068797-32068980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr20:3035160-3034970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
59-237
               

               
Cow position:
               
chr20:20312695-20312871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
59-241
               

               
Cow position:
               
chr20:41403629-41403440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
60-241
               

               
Cow position:
               
chr20:6848682-6848492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr20:24392029-24391856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
61-241
               

               
Cow position:
               
chr20:9379456-9379280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
61-241
               

               
Cow position:
               
chr20:34597047-34597228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
62-236
               

               
Cow position:
               
chr20:3781374-3781554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
62-236
               

               
Cow position:
               
chr20:38818056-38817882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr20:27340112-27339937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
62-241
               

               
Cow position:
               
chr20:9988629-9988458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
62-241
               

               
Cow position:
               
chr20:38578711-38578886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
64-200
               

               
Cow position:
               
chr20:41883780-41883648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
67-179
               

               
Cow position:
               
chr20:41973705-41973818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
67-190
               

               
Cow position:
               
chr20:11498555-11498432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
70-239
               

               
Cow position:
               
chr20:19146918-19146747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr20:11340755-11340929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
70-241
               

               
Cow position:
               
chr20:10469107-10468937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
70-246
               

               
Cow position:
               
chr20:9701527-9701712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
71-241
               

               
Cow position:
               
chr20:4892780-4892951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
72-238
               

               
Cow position:
               
chr20:41309579-41309414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
74-240
               

               
Cow position:
               
chr20:27407837-27408002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
75-223
               

               
Cow position:
               
chr20:14614961-14615107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr20:12048430-12048267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr20:37200398-37200223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
76-235
               

               
Cow position:
               
chr20:11741263-11741423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
79-241
               

               
Cow position:
               
chr20:26680156-26679993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
83-241
               

               
Cow position:
               
chr20:19410333-19410493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
84-240
               

               
Cow position:
               
chr20:8020926-8020770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
87-213
               

               
Cow position:
               
chr20:38935210-38935337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
89-240
               

               
Cow position:
               
chr20:32084059-32084209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
89-240
               

               
Cow position:
               
chr20:33177212-33177058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
93-254
               

               
Cow position:
               
chr20:19328418-19328255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
97-237
               

               
Cow position:
               
chr20:12334391-12334248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
101-237
               

               
Cow position:
               
chr20:22007509-22007375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
102-232
               

               
Cow position:
               
chr20:22722033-22721901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
117-240
               

               
Cow position:
               
chr20:13994808-13994685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-241
               

               
Cow position:
               
chr20:14917293-14917171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
137-236
               

               
Cow position:
               
chr20:5633382-5633482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
141-241
               

               
Cow position:
               
chr20:9730056-9729956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               
Show alignments to all cow chromosomes.