Cow genome map
| Conread name: | Pig1-86D03 |
| Conread position: | 1-161 |
| Cow position: | chr28:25677271-25677434 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 1-184 |
| Cow position: | chr28:19564158-19564338 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 1-186 |
| Cow position: | chr28:3011201-3011385 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 1-186 |
| Cow position: | chr28:5166837-5166654 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 1-207 |
| Cow position: | chr28:8140552-8140350 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 1-208 |
| Cow position: | chr28:5193398-5193187 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 1-210 |
| Cow position: | chr28:3449373-3449164 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 1-222 |
| Cow position: | chr28:20313347-20313125 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-226 |
| Cow position: | chr28:30746660-30746879 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-227 |
| Cow position: | chr28:11786647-11786865 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 1-227 |
| Cow position: | chr28:23007660-23007886 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-230 |
| Cow position: | chr28:7439320-7439090 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 1-230 |
| Cow position: | chr28:11426471-11426697 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 1-232 |
| Cow position: | chr28:8408804-8408577 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-236 |
| Cow position: | chr28:18354263-18354485 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 1-238 |
| Cow position: | chr28:26922298-26922528 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 1-239 |
| Cow position: | chr28:4841320-4841556 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 1-239 |
| Cow position: | chr28:5817912-5817682 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-239 |
| Cow position: | chr28:12947019-12946781 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:2752424-2752662 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:2862938-2862700 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-240 |
| Cow position: | chr28:4643700-4643928 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-240 |
| Cow position: | chr28:4834774-4835007 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-240 |
| Cow position: | chr28:5236534-5236764 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-240 |
| Cow position: | chr28:5827020-5826778 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:6059400-6059634 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:7512514-7512753 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-240 |
| Cow position: | chr28:8347801-8347564 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-240 |
| Cow position: | chr28:9100003-9099774 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 1-240 |
| Cow position: | chr28:11866595-11866831 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 1-240 |
| Cow position: | chr28:13267859-13267620 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 95, 15 |
| Conread position: | 1-240 |
| Cow position: | chr28:13607968-13607722 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 195 |
| Conread position: | 1-240 |
| Cow position: | chr28:14934028-14933800 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:14998137-14997900 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-240 |
| Cow position: | chr28:18625304-18625061 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:19025935-19026176 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 1-240 |
| Cow position: | chr28:19222081-19222307 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-240 |
| Cow position: | chr28:23616477-23616241 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 1-240 |
| Cow position: | chr28:26533613-26533381 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-240 |
| Cow position: | chr28:27218392-27218159 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 1-241 |
| Cow position: | chr28:2960760-2960998 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-241 |
| Cow position: | chr28:3914787-3914543 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 1-241 |
| Cow position: | chr28:4881170-4881411 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:5144451-5144688 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:7415940-7416175 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 1-241 |
| Cow position: | chr28:7697912-7698150 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 1-241 |
| Cow position: | chr28:10053255-10053502 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 1-241 |
| Cow position: | chr28:10745284-10745043 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:16110007-16109778 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:17637795-17638033 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 1-241 |
| Cow position: | chr28:21598182-21598420 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:22346091-22345852 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 1-241 |
| Cow position: | chr28:23410253-23410490 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 1-241 |
| Cow position: | chr28:26103772-26103549 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 1-241 |
| Cow position: | chr28:26719413-26719190 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 1-241 |
| Cow position: | chr28:26743696-26743455 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-242 |
| Cow position: | chr28:13527264-13527036 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 1-253 |
| Cow position: | chr28:16085395-16085144 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-254 |
| Cow position: | chr28:21868527-21868270 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-254 |
| Cow position: | chr28:25249424-25249174 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-255 |
| Cow position: | chr28:10529420-10529665 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 1-260 |
| Cow position: | chr28:7865399-7865139 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 1-260 |
| Cow position: | chr28:14720714-14720963 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 1-300 |
| Cow position: | chr28:18186626-18186334 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 2-163 |
| Cow position: | chr28:8147795-8147951 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 2-213 |
| Cow position: | chr28:19262518-19262727 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 2-227 |
| Cow position: | chr28:616455-616232 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 2-228 |
| Cow position: | chr28:10057518-10057745 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 2-232 |
| Cow position: | chr28:21355300-21355069 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 2-235 |
| Cow position: | chr28:4307828-4308068 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 2-235 |
| Cow position: | chr28:25806642-25806411 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 2-238 |
| Cow position: | chr28:4282422-4282651 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 2-239 |
| Cow position: | chr28:32365913-32365681 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 2-240 |
| Cow position: | chr28:7548989-7549224 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 2-240 |
| Cow position: | chr28:19079776-19080010 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 180, 16 |
| Conread position: | 2-240 |
| Cow position: | chr28:21380950-21380713 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 2-240 |
| Cow position: | chr28:26982669-26982908 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 2-240 |
| Cow position: | chr28:27313663-27313910 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 2-241 |
| Cow position: | chr28:5771435-5771203 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 2-241 |
| Cow position: | chr28:18934523-18934289 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 2-241 |
| Cow position: | chr28:20124854-20124619 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 2-241 |
| Cow position: | chr28:23676207-23675976 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 2-245 |
| Cow position: | chr28:14512602-14512353 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 2-253 |
| Cow position: | chr28:12951486-12951252 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 3-219 |
| Cow position: | chr28:7008910-7009118 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 3-239 |
| Cow position: | chr28:25727440-25727213 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 3-240 |
| Cow position: | chr28:751295-751063 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 3-240 |
| Cow position: | chr28:16204266-16204494 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 3-240 |
| Cow position: | chr28:28765835-28766071 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 3-241 |
| Cow position: | chr28:15043794-15044025 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 3-242 |
| Cow position: | chr28:24672333-24672098 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 3-243 |
| Cow position: | chr28:3408150-3408382 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 3-321 |
| Cow position: | chr28:33052105-33051793 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 5-217 |
| Cow position: | chr28:27161260-27161472 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 5-260 |
| Cow position: | chr28:8291493-8291248 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 6-240 |
| Cow position: | chr28:22323333-22323100 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 6-240 |
| Cow position: | chr28:26685182-26684951 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 6-241 |
| Cow position: | chr28:10845172-10844952 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 7-241 |
| Cow position: | chr28:22485317-22485079 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 9-247 |
| Cow position: | chr28:3105327-3105068 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 12-209 |
| Cow position: | chr28:8787597-8787405 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 12-240 |
| Cow position: | chr28:9928223-9928446 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 12-240 |
| Cow position: | chr28:18759989-18760213 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 12-241 |
| Cow position: | chr28:2899046-2898829 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 12-241 |
| Cow position: | chr28:5224764-5224550 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 12-254 |
| Cow position: | chr28:4058039-4057804 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 24-241 |
| Cow position: | chr28:23724417-23724622 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 196, 14 |
| Conread position: | 25-241 |
| Cow position: | chr28:28903615-28903834 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 29-241 |
| Cow position: | chr28:13865890-13865678 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 31-228 |
| Cow position: | chr28:7607935-7608133 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 32-240 |
| Cow position: | chr28:21103784-21104013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 36-237 |
| Cow position: | chr28:1632613-1632817 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 36-240 |
| Cow position: | chr28:5931392-5931183 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 36-324 |
| Cow position: | chr28:21207356-21207648 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 38-239 |
| Cow position: | chr28:1838027-1837826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 38-240 |
| Cow position: | chr28:12942416-12942210 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 38-240 |
| Cow position: | chr28:13176647-13176840 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 39-225 |
| Cow position: | chr28:25728232-25728049 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 41-240 |
| Cow position: | chr28:9285339-9285539 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 41-240 |
| Cow position: | chr28:25283231-25283042 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 41-240 |
| Cow position: | chr28:25424263-25424464 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 41-241 |
| Cow position: | chr28:3078650-3078844 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 43-241 |
| Cow position: | chr28:31649115-31648907 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 48-264 |
| Cow position: | chr28:9108473-9108253 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 51-241 |
| Cow position: | chr28:6307913-6307723 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 133, 6 |
| Conread position: | 51-241 |
| Cow position: | chr28:19222581-19222764 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 51-241 |
| Cow position: | chr28:22739813-22739631 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 6 |
| Conread position: | 52-241 |
| Cow position: | chr28:6861977-6861787 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 53-237 |
| Cow position: | chr28:10606605-10606793 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 56-209 |
| Cow position: | chr28:5552921-5553077 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 136 |
| Conread position: | 56-241 |
| Cow position: | chr28:17029700-17029882 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 57-232 |
| Cow position: | chr28:4022404-4022229 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 57-235 |
| Cow position: | chr28:16386490-16386670 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 61 |
| Conread position: | 57-240 |
| Cow position: | chr28:118034-118217 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 57-240 |
| Cow position: | chr28:4880248-4880429 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 57-241 |
| Cow position: | chr28:3474977-3474796 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 57-241 |
| Cow position: | chr28:5773652-5773473 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 57-241 |
| Cow position: | chr28:16252840-16253024 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 57-241 |
| Cow position: | chr28:34877951-34878139 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 59-237 |
| Cow position: | chr28:7547313-7547485 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 61-239 |
| Cow position: | chr28:19024157-19023972 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 61-240 |
| Cow position: | chr28:21363759-21363581 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 61-241 |
| Cow position: | chr28:22170697-22170884 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 62-241 |
| Cow position: | chr28:9390352-9390531 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 62-241 |
| Cow position: | chr28:26784452-26784633 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 71-240 |
| Cow position: | chr28:22321429-22321260 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 89-242 |
| Cow position: | chr28:13290151-13290299 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 97-259 |
| Cow position: | chr28:19295381-19295546 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 99-241 |
| Cow position: | chr28:13241850-13241990 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 105-239 |
| Cow position: | chr28:11451494-11451627 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 107-240 |
| Cow position: | chr28:17738105-17738240 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 117-241 |
| Cow position: | chr28:5188446-5188568 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 117-241 |
| Cow position: | chr28:26264764-26264637 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 136-232 |
| Cow position: | chr28:19015346-19015442 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-230 |
| Cow position: | chr28:20759984-20760075 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.