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Cow genome map

           
Conread name:
           
Pig1-86D03
        

               
Conread position:
               
1-163
               

               
Cow position:
               
chr5:67212452-67212287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr5:61771210-61771028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr5:30805255-30805077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr5:12557196-12557395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr5:35784899-35785079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr5:56635986-56635797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr5:57767894-57768086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr5:59325751-59325941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr5:35126146-35125945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr5:23678611-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr5:58446898-58446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr5:13717478-13717684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr5:12902008-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr5:44796642-44796849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr5:73080296-73080083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr5:19523991-19523775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr5:19335690-19335913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr5:39258596-39258399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr5:56680347-56680121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr5:45273410-45273633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr5:18289213-18288995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:31918733-31918512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr5:62107395-62107627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr5:5257197-5257429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr5:14473313-14473550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr5:36650644-36650414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:47323553-47323314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:3242390-3242619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:7755478-7755703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:29828138-29827908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:31481239-31481009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:33414320-33414554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:44049789-44049557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:61829773-61830010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:65588790-65588562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr5:37808572-37808816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr5:57575864-57575626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr5:7044614-7044851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr5:47704035-47704274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr5:53855797-53855550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr5:54060367-54060133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr5:63964074-63964313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:2309465-2309705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:4221069-4220839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:5110983-5111218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:6838988-6839220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:9089932-9090165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:16206064-16206301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:16509197-16508949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
16, 229
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:20128143-20127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:24349198-24348961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:24996132-24996368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:30276781-30276552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:36855297-36855062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:37646172-37645932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:37646452-37646691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:41165179-41164948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:42744872-42744642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:46512678-46512908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:50821874-50821637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:51151263-51151504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:52165087-52165324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:55068797-55068565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:55955999-55955764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:55966789-55967024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:56070950-56070711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:61576636-61576394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:64523772-64524022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:65883681-65883921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:65886919-65887156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:71723167-71722920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:6286342-6286573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:6503790-6504026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:6528774-6528534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:11668094-11668325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:29903432-29903669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:30178413-30178657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:30253832-30253595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:30949824-30950066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:34050209-34049963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:35247019-35247257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:40039675-40039913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:43858329-43858578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:43992415-43992174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:47316883-47317116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:47547632-47547864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:59115473-59115234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:62142767-62142524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:64137347-64137105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:64758676-64758913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:65752951-65752710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:69520982-69520744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr5:71494912-71494671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr5:14629719-14629960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr5:17062990-17063238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr5:458579-458334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr5:17999405-17999655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr5:26377576-26377828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr5:50533297-50533544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr5:63987355-63987608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr5:4280539-4280301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr5:30302982-30302733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr5:34528638-34528399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
207, 17
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr5:42064296-42064040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr5:44446774-44447049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr5:55019382-55019194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr5:23357419-23357229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr5:41294170-41293975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr5:33560644-33560851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr5:26476928-26477131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr5:54767819-54768042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr5:30845200-30844977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr5:16214777-16214547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr5:67540111-67540343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr5:52644990-52645221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:11427143-11427383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:16893681-16893917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:45574710-45574475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:49685181-49685421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr5:58748860-58748621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr5:54311426-54311186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr5:56518132-56518356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr5:61840278-61840040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr5:53946986-53946782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr5:35231631-35231398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr5:44053966-44054179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr5:56467780-56467554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr5:66972518-66972282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr5:21828957-21828718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr5:26097378-26097149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr5:39094639-39094406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr5:15598148-15598375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr5:32696735-32696966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr5:65776298-65776527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr5:39447448-39447677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr5:28224540-28224286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr5:35826689-35826383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr5:51935275-51935052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr5:28945977-28946186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr5:46122268-46122495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr5:56820179-56820408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr5:55756334-55756558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr5:13691485-13691716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr5:50723129-50722900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr5:35459215-35459441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr5:991542-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr5:28926102-28926318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr5:53835795-53835578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr5:14903990-14904218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr5:54350283-54350511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr5:32140630-32140854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr5:34638962-34638727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
13-237
               

               
Cow position:
               
chr5:41522718-41522938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
14-241
               

               
Cow position:
               
chr5:55821454-55821220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr5:21920455-21920226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr5:42777841-42777618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr5:2500109-2500335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
59, 7
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr5:28957546-28957758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr5:19778513-19778725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
30-254
               

               
Cow position:
               
chr5:1766286-1766505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
32-237
               

               
Cow position:
               
chr5:34115714-34115511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr5:28456347-28456552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr5:28459648-28459854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
32-241
               

               
Cow position:
               
chr5:72564826-72564615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:8024132-8024348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
33-231
               

               
Cow position:
               
chr5:4218928-4218739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
33-236
               

               
Cow position:
               
chr5:75230736-75230539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr5:47696382-47696583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr5:28927529-28927739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
35-241
               

               
Cow position:
               
chr5:32956035-32956242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
36-229
               

               
Cow position:
               
chr5:69047307-69047496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
36-242
               

               
Cow position:
               
chr5:26990455-26990250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
38-223
               

               
Cow position:
               
chr5:60747221-60747404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr5:29212999-29212811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
38-236
               

               
Cow position:
               
chr5:41486681-41486882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
38-237
               

               
Cow position:
               
chr5:34300974-34300776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr5:26262619-26262817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr5:27015735-27015539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr5:49361937-49362133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr5:52000278-52000077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr5:55176948-55176745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr5:12709944-12709739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr5:60715309-60715501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr5:27155079-27154878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
39-241
               

               
Cow position:
               
chr5:44993986-44994184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
41-189
               

               
Cow position:
               
chr5:72286863-72287007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
41-209
               

               
Cow position:
               
chr5:3639435-3639606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr5:21964341-21964148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr5:75436834-75437030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr5:18090790-18090578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr5:4031937-4032141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
41-241
               

               
Cow position:
               
chr5:54713679-54713883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
41-255
               

               
Cow position:
               
chr5:21039926-21040133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr5:62826701-62826898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
42-241
               

               
Cow position:
               
chr5:30487293-30487092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr5:7140056-7140241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
43-240
               

               
Cow position:
               
chr5:12866768-12866970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
43-241
               

               
Cow position:
               
chr5:35235659-35235855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
43-241
               

               
Cow position:
               
chr5:42667337-42667536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
43-241
               

               
Cow position:
               
chr5:58144551-58144750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
44-219
               

               
Cow position:
               
chr5:60448265-60448090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
45-240
               

               
Cow position:
               
chr5:43816555-43816753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
51-240
               

               
Cow position:
               
chr5:57327837-57327651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
51-241
               

               
Cow position:
               
chr5:40169146-40169333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
52-198
               

               
Cow position:
               
chr5:56469781-56469929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 5
               

               
Conread position:
               
52-237
               

               
Cow position:
               
chr5:4347676-4347868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr5:47888670-47888856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 5
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr5:59443206-59443393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr5:63840107-63840287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
52-241
               

               
Cow position:
               
chr5:3771892-3771700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
56-192
               

               
Cow position:
               
chr5:29860389-29860250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
56-238
               

               
Cow position:
               
chr5:49821178-49821000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
57-221
               

               
Cow position:
               
chr5:21944435-21944269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr5:34467060-34467224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr5:20345199-20345023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr5:54064813-54064642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
57-240
               

               
Cow position:
               
chr5:24485397-24485576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr5:8994528-8994712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr5:17644617-17644802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr5:43395112-43395285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr5:71579213-71579027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr5:16185125-16184928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
58-229
               

               
Cow position:
               
chr5:44583096-44583259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
58-240
               

               
Cow position:
               
chr5:23856122-23856312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
58-240
               

               
Cow position:
               
chr5:58005282-58005102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
59-231
               

               
Cow position:
               
chr5:37377899-37377735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
59-237
               

               
Cow position:
               
chr5:7921369-7921542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
59-241
               

               
Cow position:
               
chr5:6130389-6130206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
60-241
               

               
Cow position:
               
chr5:30638829-30639000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr5:35763304-35763139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
61-239
               

               
Cow position:
               
chr5:47721577-47721393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr5:28324389-28324207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
61-241
               

               
Cow position:
               
chr5:45037047-45036875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
61-242
               

               
Cow position:
               
chr5:37713861-37714045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
61-254
               

               
Cow position:
               
chr5:43474878-43474686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
63-230
               

               
Cow position:
               
chr5:38647386-38647224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
63-240
               

               
Cow position:
               
chr5:74643644-74643814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
67-231
               

               
Cow position:
               
chr5:67932439-67932597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
67-241
               

               
Cow position:
               
chr5:56134937-56135115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
69-240
               

               
Cow position:
               
chr5:41531058-41531229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
69-241
               

               
Cow position:
               
chr5:44849706-44849869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
69-254
               

               
Cow position:
               
chr5:50950579-50950392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
70-232
               

               
Cow position:
               
chr5:47313498-47313336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
70-240
               

               
Cow position:
               
chr5:39333515-39333684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
70-253
               

               
Cow position:
               
chr5:29097392-29097202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
76-241
               

               
Cow position:
               
chr5:42748176-42748009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
78-237
               

               
Cow position:
               
chr5:19294474-19294628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
81-246
               

               
Cow position:
               
chr5:60520178-60520013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
84-241
               

               
Cow position:
               
chr5:64060284-64060440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
85-228
               

               
Cow position:
               
chr5:31020131-31020268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
85-240
               

               
Cow position:
               
chr5:39242190-39242340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
88-240
               

               
Cow position:
               
chr5:40356858-40357012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
88-241
               

               
Cow position:
               
chr5:31469577-31469731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
90-240
               

               
Cow position:
               
chr5:51490752-51490905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
95-241
               

               
Cow position:
               
chr5:65932930-65933078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
99-241
               

               
Cow position:
               
chr5:32963635-32963776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
105-240
               

               
Cow position:
               
chr5:57271275-57271414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
105-284
               

               
Cow position:
               
chr5:43844804-43844985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
106-240
               

               
Cow position:
               
chr5:15426517-15426384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
125-239
               

               
Cow position:
               
chr5:50870515-50870401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-241
               

               
Cow position:
               
chr5:45025950-45026064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-241
               

               
Cow position:
               
chr5:12563043-12563152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
137-240
               

               
Cow position:
               
chr5:54750794-54750691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-241
               

               
Cow position:
               
chr5:14415736-14415629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.