Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-169 |
| Cow position: | chr10:46240336-46240505 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 1-170 |
| Cow position: | chr10:48745367-48745195 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-221 |
| Cow position: | chr10:6255010-6254791 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 1-224 |
| Cow position: | chr10:12101938-12101723 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-224 |
| Cow position: | chr10:42335175-42334965 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-275 |
| Cow position: | chr10:6287194-6287473 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-275 |
| Cow position: | chr10:31855927-31856210 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-298 |
| Cow position: | chr10:2118579-2118270 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-325 |
| Cow position: | chr10:29107334-29107007 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 185 |
| Conread position: | 1-344 |
| Cow position: | chr10:34667586-34667243 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 1-356 |
| Cow position: | chr10:41149295-41148929 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 76, 167 |
| Conread position: | 1-450 |
| Cow position: | chr10:24975387-24974939 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 151 |
| Conread position: | 1-474 |
| Cow position: | chr10:51950652-51950168 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-482 |
| Cow position: | chr10:27123103-27122626 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 184 |
| Conread position: | 1-484 |
| Cow position: | chr10:42115703-42116178 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 88 |
| Conread position: | 1-486 |
| Cow position: | chr10:38723721-38724210 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 1-487 |
| Cow position: | chr10:21738281-21737783 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 216 |
| Conread position: | 1-487 |
| Cow position: | chr10:32580682-32581179 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 1-488 |
| Cow position: | chr10:29629825-29629326 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-488 |
| Cow position: | chr10:41140567-41140078 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 1-488 |
| Cow position: | chr10:51781000-51780497 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 1-489 |
| Cow position: | chr10:8292573-8293073 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 399 |
| Conread position: | 1-489 |
| Cow position: | chr10:14806381-14806879 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 217 |
| Conread position: | 1-489 |
| Cow position: | chr10:19842117-19842614 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 215 |
| Conread position: | 1-489 |
| Cow position: | chr10:21426855-21426360 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 200 |
| Conread position: | 1-489 |
| Cow position: | chr10:21516565-21516072 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 1-489 |
| Cow position: | chr10:22103935-22104423 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 96 |
| Conread position: | 1-489 |
| Cow position: | chr10:22574386-22573915 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 1-489 |
| Cow position: | chr10:23848410-23848909 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:25650973-25650476 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:26293041-26292544 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 1-489 |
| Cow position: | chr10:26670120-26670611 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 1-489 |
| Cow position: | chr10:30719137-30719638 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:32086134-32086631 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:32703210-32703705 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr10:35824896-35824400 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:38842611-38843110 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-489 |
| Cow position: | chr10:39210208-39210716 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-489 |
| Cow position: | chr10:40348209-40347712 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 213 |
| Conread position: | 1-489 |
| Cow position: | chr10:41159866-41160360 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 84 |
| Conread position: | 1-489 |
| Cow position: | chr10:44706263-44705763 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 399 |
| Conread position: | 1-489 |
| Cow position: | chr10:47909067-47909560 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-489 |
| Cow position: | chr10:51557844-51558343 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 1-489 |
| Cow position: | chr10:52827167-52826684 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 1-489 |
| Cow position: | chr10:57554891-57554392 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-490 |
| Cow position: | chr10:46762652-46763146 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 72 |
| Conread position: | 1-494 |
| Cow position: | chr10:32364387-32364891 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-497 |
| Cow position: | chr10:8681068-8681576 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-497 |
| Cow position: | chr10:30683044-30682537 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-497 |
| Cow position: | chr10:50017914-50017410 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 165 |
| Conread position: | 1-498 |
| Cow position: | chr10:18040434-18040948 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 1-498 |
| Cow position: | chr10:36467412-36466904 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 1-498 |
| Cow position: | chr10:42642978-42643498 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 93 |
| Conread position: | 1-499 |
| Cow position: | chr10:278905-278397 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 129 |
| Conread position: | 1-499 |
| Cow position: | chr10:21897205-21896694 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 184 |
| Conread position: | 2-489 |
| Cow position: | chr10:39813946-39813447 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 2-496 |
| Cow position: | chr10:50314081-50314584 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 7-489 |
| Cow position: | chr10:57987249-57986752 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 10-489 |
| Cow position: | chr10:41569558-41570047 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 14-397 |
| Cow position: | chr10:39651020-39650632 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 185 |
| Conread position: | 14-489 |
| Cow position: | chr10:19513689-19514175 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 14-489 |
| Cow position: | chr10:25004377-25004857 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 59 |
| Conread position: | 14-498 |
| Cow position: | chr10:21489403-21489891 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 15-498 |
| Cow position: | chr10:59841383-59840884 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 17-475 |
| Cow position: | chr10:24309730-24309268 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 152 |
| Conread position: | 28-488 |
| Cow position: | chr10:2526175-2526640 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 40-484 |
| Cow position: | chr10:55026345-55026780 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 102 |
| Conread position: | 43-490 |
| Cow position: | chr10:58686691-58687133 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 74-488 |
| Cow position: | chr10:60362509-60362918 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 58 |
Show alignments to all cow chromosomes.