Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-275 |
| Cow position: | chr13:4733691-4733974 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-275 |
| Cow position: | chr13:11389365-11389648 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 217 |
| Conread position: | 1-275 |
| Cow position: | chr13:49613375-49613099 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 161 |
| Conread position: | 1-282 |
| Cow position: | chr13:3692789-3692499 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-396 |
| Cow position: | chr13:51466041-51465635 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-436 |
| Cow position: | chr13:13327101-13327542 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 1-443 |
| Cow position: | chr13:44324799-44324337 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 262 |
| Conread position: | 1-445 |
| Cow position: | chr13:11737914-11738369 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-461 |
| Cow position: | chr13:32080022-32080493 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 1-484 |
| Cow position: | chr13:393961-393483 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 85 |
| Conread position: | 1-484 |
| Cow position: | chr13:5230787-5230304 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 152 |
| Conread position: | 1-484 |
| Cow position: | chr13:33334190-33333702 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 1-488 |
| Cow position: | chr13:15559493-15559991 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 217 |
| Conread position: | 1-488 |
| Cow position: | chr13:35759717-35760212 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 121 |
| Conread position: | 1-489 |
| Cow position: | chr13:562229-561728 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-489 |
| Cow position: | chr13:3555569-3556069 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 217 |
| Conread position: | 1-489 |
| Cow position: | chr13:4486012-4486509 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 217 |
| Conread position: | 1-489 |
| Cow position: | chr13:5516169-5515670 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 1-489 |
| Cow position: | chr13:6665976-6665472 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr13:15922300-15921801 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr13:18122713-18122214 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr13:18330951-18330469 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 108 |
| Conread position: | 1-489 |
| Cow position: | chr13:19230553-19230055 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 215 |
| Conread position: | 1-489 |
| Cow position: | chr13:23455597-23456094 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr13:24236722-24237209 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 1-489 |
| Cow position: | chr13:30305352-30305845 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 229 |
| Conread position: | 1-489 |
| Cow position: | chr13:33523798-33523298 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr13:34870121-34870615 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 1-489 |
| Cow position: | chr13:35539323-35539825 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 145 |
| Conread position: | 1-489 |
| Cow position: | chr13:50111627-50112122 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-497 |
| Cow position: | chr13:31731405-31730906 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 212 |
| Conread position: | 1-497 |
| Cow position: | chr13:36347959-36347457 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 1-497 |
| Cow position: | chr13:43591434-43591952 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 1-498 |
| Cow position: | chr13:17310577-17311083 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 184 |
| Conread position: | 1-499 |
| Cow position: | chr13:1883326-1882838 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 202 |
| Conread position: | 7-308 |
| Cow position: | chr13:11255881-11255582 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 7-488 |
| Cow position: | chr13:60647417-60646930 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 158 |
| Conread position: | 7-489 |
| Cow position: | chr13:19637310-19637809 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 7-489 |
| Cow position: | chr13:36671819-36672313 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 393 |
| Conread position: | 7-489 |
| Cow position: | chr13:41338495-41338013 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 207 |
| Conread position: | 10-478 |
| Cow position: | chr13:17537735-17538207 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 131, 108 |
| Conread position: | 15-378 |
| Cow position: | chr13:34050872-34051252 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 154 |
| Conread position: | 15-483 |
| Cow position: | chr13:33632944-33632499 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 15-489 |
| Cow position: | chr13:5499815-5499330 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 130 |
| Conread position: | 15-499 |
| Cow position: | chr13:21906764-21906249 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 398 |
| Conread position: | 16-499 |
| Cow position: | chr13:3481686-3481216 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 134 |
| Conread position: | 17-488 |
| Cow position: | chr13:5260943-5261413 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 22-488 |
| Cow position: | chr13:19115219-19114764 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 25-498 |
| Cow position: | chr13:19394837-19394365 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 34-495 |
| Cow position: | chr13:54144999-54145457 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 107 |
| Conread position: | 48-427 |
| Cow position: | chr13:32536709-32536327 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 63-390 |
| Cow position: | chr13:49061586-49061917 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 147 |
Show alignments to all cow chromosomes.