Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-268 |
| Cow position: | chr15:20017445-20017169 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-275 |
| Cow position: | chr15:3837430-3837147 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-327 |
| Cow position: | chr15:43293138-43292805 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-353 |
| Cow position: | chr15:38821597-38821240 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 1-380 |
| Cow position: | chr15:6280657-6281052 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 219 |
| Conread position: | 1-396 |
| Cow position: | chr15:33123414-33123820 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-414 |
| Cow position: | chr15:6330062-6330475 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 1-435 |
| Cow position: | chr15:27635460-27635905 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 201 |
| Conread position: | 1-441 |
| Cow position: | chr15:2078666-2079111 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-461 |
| Cow position: | chr15:502128-502582 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-463 |
| Cow position: | chr15:6080737-6081204 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-470 |
| Cow position: | chr15:7552656-7553117 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 54 |
| Conread position: | 1-484 |
| Cow position: | chr15:6066480-6065999 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 133 |
| Conread position: | 1-487 |
| Cow position: | chr15:480612-481112 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-487 |
| Cow position: | chr15:4199040-4199521 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-487 |
| Cow position: | chr15:32718561-32718081 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 112 |
| Conread position: | 1-488 |
| Cow position: | chr15:24297226-24297723 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-488 |
| Cow position: | chr15:40647394-40646895 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 1-489 |
| Cow position: | chr15:2663419-2663918 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:2900219-2899725 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:3891598-3892095 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:4081037-4081532 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:6153897-6153401 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 1-489 |
| Cow position: | chr15:7546913-7547405 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 1-489 |
| Cow position: | chr15:7848382-7848881 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:13429855-13430354 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:14580114-14579615 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:15345072-15344573 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:18229097-18229596 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 217 |
| Conread position: | 1-489 |
| Cow position: | chr15:18265730-18265231 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 1-489 |
| Cow position: | chr15:25131987-25132486 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:25204974-25204476 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr15:28488091-28487598 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 1-489 |
| Cow position: | chr15:32491857-32491358 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:35751264-35750765 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 149 |
| Conread position: | 1-489 |
| Cow position: | chr15:36330425-36329930 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 215 |
| Conread position: | 1-489 |
| Cow position: | chr15:36941354-36940852 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:42944574-42944076 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 199 |
| Conread position: | 1-489 |
| Cow position: | chr15:51219773-51220271 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr15:52976988-52977487 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-491 |
| Cow position: | chr15:20354446-20353946 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 189 |
| Conread position: | 1-497 |
| Cow position: | chr15:6804597-6805110 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 256 |
| Conread position: | 1-497 |
| Cow position: | chr15:29342015-29341512 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 213 |
| Conread position: | 1-498 |
| Cow position: | chr15:2410664-2410173 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 1-498 |
| Cow position: | chr15:14574270-14573767 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 187 |
| Conread position: | 1-498 |
| Cow position: | chr15:16788743-16788247 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 1-499 |
| Cow position: | chr15:24287456-24286959 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 3-489 |
| Cow position: | chr15:37631055-37631552 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 325 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 73, 165 |
| Conread position: | 4-308 |
| Cow position: | chr15:7840338-7840652 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 149 |
| Conread position: | 7-449 |
| Cow position: | chr15:20412637-20413085 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 7-488 |
| Cow position: | chr15:7672070-7671594 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 86 |
| Conread position: | 14-489 |
| Cow position: | chr15:1600632-1601116 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 204 |
| Conread position: | 14-489 |
| Cow position: | chr15:31363511-31363996 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 14-489 |
| Cow position: | chr15:32066210-32065727 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 15-184 |
| Cow position: | chr15:21913932-21913752 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 15-489 |
| Cow position: | chr15:30727201-30726720 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 184 |
| Conread position: | 17-435 |
| Cow position: | chr15:5939620-5939192 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 26-489 |
| Cow position: | chr15:313737-313270 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 40-489 |
| Cow position: | chr15:13546977-13546518 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 43-353 |
| Cow position: | chr15:44861007-44861313 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 157, 98 |
| Conread position: | 46-476 |
| Cow position: | chr15:17682175-17681742 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 31, 171 |
| Conread position: | 63-464 |
| Cow position: | chr15:21452040-21452442 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 74-485 |
| Cow position: | chr15:51227233-51227654 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 75 |
| Conread position: | 96-398 |
| Cow position: | chr15:23174051-23173751 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 45 |
Show alignments to all cow chromosomes.