Cow genome map
| Conread name: | Pig1-87J20 |
| Conread position: | 1-275 |
| Cow position: | chr17:19979876-19979595 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 1-287 |
| Cow position: | chr17:16446151-16445861 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 137, 91 |
| Conread position: | 1-320 |
| Cow position: | chr17:5044960-5044635 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 1-324 |
| Cow position: | chr17:136891-137229 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-341 |
| Cow position: | chr17:40554-40906 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 201 |
| Conread position: | 1-402 |
| Cow position: | chr17:16903134-16903535 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-445 |
| Cow position: | chr17:452084-452538 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-445 |
| Cow position: | chr17:13418652-13419102 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-449 |
| Cow position: | chr17:20098062-20097612 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 1-461 |
| Cow position: | chr17:15808223-15808694 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-463 |
| Cow position: | chr17:19234056-19234508 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 1-483 |
| Cow position: | chr17:14214785-14214293 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 144 |
| Conread position: | 1-488 |
| Cow position: | chr17:22107394-22106894 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 143 |
| Conread position: | 1-489 |
| Cow position: | chr17:147182-147663 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 336 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 74, 168 |
| Conread position: | 1-489 |
| Cow position: | chr17:2264437-2264936 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 217 |
| Conread position: | 1-489 |
| Cow position: | chr17:3742412-3742911 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr17:5307487-5306988 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 152 |
| Conread position: | 1-489 |
| Cow position: | chr17:8204177-8204678 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 1-489 |
| Cow position: | chr17:8210903-8211404 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 1-489 |
| Cow position: | chr17:13930143-13930640 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 242 |
| Conread position: | 1-489 |
| Cow position: | chr17:15327535-15328023 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 212 |
| Conread position: | 1-489 |
| Cow position: | chr17:15709741-15709251 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 1-489 |
| Cow position: | chr17:25738549-25739046 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 1-489 |
| Cow position: | chr17:29825713-29825219 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 1-495 |
| Cow position: | chr17:240541-241038 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 137 |
| Conread position: | 1-497 |
| Cow position: | chr17:1705651-1706159 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 1-499 |
| Cow position: | chr17:23322175-23321671 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 2-498 |
| Cow position: | chr17:2032484-2032955 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 4-345 |
| Cow position: | chr17:1458645-1458993 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 4-489 |
| Cow position: | chr17:14242079-14242576 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 5-478 |
| Cow position: | chr17:17132607-17133080 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 7-489 |
| Cow position: | chr17:16855840-16855351 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 7-489 |
| Cow position: | chr17:18100826-18100333 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 146 |
| Conread position: | 7-489 |
| Cow position: | chr17:27792525-27792031 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 138 |
| Conread position: | 10-489 |
| Cow position: | chr17:10842531-10843018 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 51 |
| Conread position: | 13-489 |
| Cow position: | chr17:10322230-10322706 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 177 |
| Conread position: | 14-488 |
| Cow position: | chr17:253082-253569 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 15-382 |
| Cow position: | chr17:21714253-21714627 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 18-489 |
| Cow position: | chr17:24027723-24027241 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 91 |
| Conread position: | 80-489 |
| Cow position: | chr17:24291971-24292379 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 61 |
Show alignments to all cow chromosomes.